RNA–Protein interactions for RNA: ENST00000372858.7

PABPC4-203, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 1 (best) BASIC

Gene PABPC4, Length 2,753 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-203ENST00000372858 FOXD1Q16676 465 aa22.76■■□□□ 1.23
PABPC4-203ENST00000372858 PRKRIP1Q9H875 184 aaPredicted RBP22.76■■□□□ 1.23
PABPC4-203ENST00000372858 FAM9BQ8IZU0 186 aa22.75■■□□□ 1.23
PABPC4-203ENST00000372858 C11orf95C9JLR9 678 aaPredicted RBP22.73■■□□□ 1.23
PABPC4-203ENST00000372858 MRS2Q9HD23 443 aa22.73■■□□□ 1.23
PABPC4-203ENST00000372858 DNAJC5BQ9UF47 199 aa22.72■■□□□ 1.23
PABPC4-203ENST00000372858 CCDC7Q96M83 1385 aa22.72■■□□□ 1.23
PABPC4-203ENST00000372858 PBRM1Q86U86 1689 aa22.72■■□□□ 1.23
PABPC4-203ENST00000372858 WDR62O43379 1518 aa22.7■■□□□ 1.22
PABPC4-203ENST00000372858 NCOA1Q15788 1441 aa22.7■■□□□ 1.22
PABPC4-203ENST00000372858 ZBED9Q6R2W3 1325 aa22.69■■□□□ 1.22
PABPC4-203ENST00000372858 ROCK1Q13464 1354 aa22.67■■□□□ 1.22
PABPC4-203ENST00000372858 ADAMTS12P58397 1594 aa22.67■■□□□ 1.22
PABPC4-203ENST00000372858 ANKRD30BQ9BXX2 1392 aa22.67■■□□□ 1.22
PABPC4-203ENST00000372858 DAPK1P53355 1430 aa22.66■■□□□ 1.22
PABPC4-203ENST00000372858 SLC4A1APQ9BWU0 796 aaKnown RBP22.66■■□□□ 1.22
PABPC4-203ENST00000372858 B4GALNT3Q6L9W6 998 aa22.66■■□□□ 1.22
PABPC4-203ENST00000372858 RPRD2Q5VT52 1461 aaKnown RBP22.65■■□□□ 1.22
PABPC4-203ENST00000372858 NBPF8Q3BBV2 869 aa22.64■■□□□ 1.21
PABPC4-203ENST00000372858 ABCC5O15440 1437 aa22.61■■□□□ 1.21
PABPC4-203ENST00000372858 ZNF644Q9H582 1327 aaPredicted RBP22.61■■□□□ 1.21
PABPC4-203ENST00000372858 KIF7Q2M1P5 1343 aa22.59■■□□□ 1.21
PABPC4-203ENST00000372858 DNMT1P26358 1616 aaKnown RBP22.58■■□□□ 1.21
PABPC4-203ENST00000372858 TEX14Q8IWB6 1497 aa22.57■■□□□ 1.2
PABPC4-203ENST00000372858 MRC2Q9UBG0 1479 aa22.55■■□□□ 1.2
PABPC4-203ENST00000372858 KIAA0586Q9BVV6 1533 aa22.54■■□□□ 1.2
PABPC4-203ENST00000372858 MYT1LQ9UL68 1186 aa22.54■■□□□ 1.2
PABPC4-203ENST00000372858 SPATA31E1Q6ZUB1 1445 aa22.54■■□□□ 1.2
PABPC4-203ENST00000372858 NUP153P49790 1475 aaKnown RBP22.53■■□□□ 1.2
PABPC4-203ENST00000372858 KIAA0556O60303 1618 aa22.52■■□□□ 1.2
PABPC4-203ENST00000372858 DISP1Q96F81 1524 aa22.51■■□□□ 1.19
PABPC4-203ENST00000372858 CFDP1Q9UEE9 299 aaPredicted RBP22.5■■□□□ 1.19
PABPC4-203ENST00000372858 RAPGEF6Q8TEU7 1601 aa22.48■■□□□ 1.19
PABPC4-203ENST00000372858 ZNF608Q9ULD9 1512 aaPredicted RBP22.48■■□□□ 1.19
PABPC4-203ENST00000372858 IFT140Q96RY7 1462 aa22.47■■□□□ 1.19
PABPC4-203ENST00000372858 SMG6Q86US8 1419 aaKnown RBP22.46■■□□□ 1.19
PABPC4-203ENST00000372858 ZNF777Q9ULD5 760 aaPredicted RBP22.45■■□□□ 1.19
PABPC4-203ENST00000372858 ZNF326Q5BKZ1 582 aaKnown RBP22.45■■□□□ 1.18
PABPC4-203ENST00000372858 POLR1AO95602 1720 aaPredicted RBP22.45■■□□□ 1.18
PABPC4-203ENST00000372858 POLR3GLQ9BT43 218 aa22.44■■□□□ 1.18
PABPC4-203ENST00000372858 TROQ12816 1431 aaPredicted RBP22.44■■□□□ 1.18
PABPC4-203ENST00000372858 NUDCQ9Y266 331 aa22.44■■□□□ 1.18
PABPC4-203ENST00000372858 PZPP20742 1482 aa22.44■■□□□ 1.18
PABPC4-203ENST00000372858 PRG4Q92954 1404 aaPredicted RBP22.44■■□□□ 1.18
PABPC4-203ENST00000372858 CNGB1Q14028 1251 aaPredicted RBP22.43■■□□□ 1.18
PABPC4-203ENST00000372858 CAMSAP2Q08AD1 1489 aa22.43■■□□□ 1.18
PABPC4-203ENST00000372858 NOP58Q9Y2X3 529 aaKnown RBP22.43■■□□□ 1.18
PABPC4-203ENST00000372858 DHX29Q7Z478 1369 aaKnown RBP22.41■■□□□ 1.18
PABPC4-203ENST00000372858 KIAA1107Q9UPP5 1409 aa22.4■■□□□ 1.18
PABPC4-203ENST00000372858 GRIN2AQ12879 1464 aa22.4■■□□□ 1.18
PABPC4-203ENST00000372858 PKD2Q13563 968 aa22.4■■□□□ 1.18
PABPC4-203ENST00000372858 USP47Q96K76 1375 aa22.4■■□□□ 1.18
PABPC4-203ENST00000372858 CCDC136Q96JN2 1154 aa22.4■■□□□ 1.18
PABPC4-203ENST00000372858 RNF123Q5XPI4 1314 aa22.38■■□□□ 1.17
PABPC4-203ENST00000372858 ANKRD30AQ9BXX3 1397 aa22.38■■□□□ 1.17
PABPC4-203ENST00000372858 ITSN2Q9NZM3 1697 aa22.37■■□□□ 1.17
PABPC4-203ENST00000372858 GPATCH8Q9UKJ3 1502 aaKnown RBP22.37■■□□□ 1.17
PABPC4-203ENST00000372858 DEKP35659 375 aaKnown RBP22.37■■□□□ 1.17
PABPC4-203ENST00000372858 ADGBQ8N7X0 1667 aa22.35■■□□□ 1.17
PABPC4-203ENST00000372858 MBD5Q9P267 1494 aa22.35■■□□□ 1.17
PABPC4-203ENST00000372858 ARID4BQ4LE39 1312 aaPredicted RBP22.34■■□□□ 1.17
PABPC4-203ENST00000372858 ADGRL2O95490 1459 aa22.34■■□□□ 1.17
PABPC4-203ENST00000372858 CHMP7Q8WUX9 453 aaPredicted RBP22.33■■□□□ 1.17
PABPC4-203ENST00000372858 PLB1Q6P1J6 1458 aa22.33■■□□□ 1.17
PABPC4-203ENST00000372858 PAK3O75914 559 aaPredicted RBP22.33■■□□□ 1.16
PABPC4-203ENST00000372858 ANKRD50Q9ULJ7 1429 aa22.32■■□□□ 1.16
PABPC4-203ENST00000372858 TMC1Q8TDI8 760 aa22.31■■□□□ 1.16
PABPC4-203ENST00000372858 PNISRQ8TF01 805 aaKnown RBP22.31■■□□□ 1.16
PABPC4-203ENST00000372858 ANP32AP39687 249 aaKnown RBP22.3■■□□□ 1.16
PABPC4-203ENST00000372858 NBR1Q14596 966 aa22.29■■□□□ 1.16
PABPC4-203ENST00000372858 KIF14Q15058 1648 aa22.29■■□□□ 1.16
PABPC4-203ENST00000372858 BCORL1Q5H9F3 1711 aa22.28■■□□□ 1.16
PABPC4-203ENST00000372858 FBLN2P98095 1184 aa22.28■■□□□ 1.16
PABPC4-203ENST00000372858 EIF4G3O43432 1585 aaKnown RBP22.28■■□□□ 1.16
PABPC4-203ENST00000372858 ROCK2O75116 1388 aaKnown RBP22.28■■□□□ 1.16
PABPC4-203ENST00000372858 NUP155O75694 1391 aa22.28■■□□□ 1.16
PABPC4-203ENST00000372858 CARD11Q9BXL7 1154 aa22.27■■□□□ 1.16
PABPC4-203ENST00000372858 CARMIL2Q6F5E8 1435 aa22.27■■□□□ 1.16
PABPC4-203ENST00000372858 SENP3-EIF4A1A0A087X0R7 540 aa22.27■■□□□ 1.16
PABPC4-203ENST00000372858 PLEKHD1A6NEE1 506 aa22.27■■□□□ 1.16
PABPC4-203ENST00000372858 IPO9Q96P70 1041 aaKnown RBP22.27■■□□□ 1.15
PABPC4-203ENST00000372858 CROCC2H7BZ55 1655 aa22.26■■□□□ 1.15
PABPC4-203ENST00000372858 ADCY10Q96PN6 1610 aa22.25■■□□□ 1.15
PABPC4-203ENST00000372858 KDM5CP41229 1560 aa22.25■■□□□ 1.15
PABPC4-203ENST00000372858 TSPY4P0CV99 314 aa22.24■■□□□ 1.15
PABPC4-203ENST00000372858 TSPY10P0CW01 314 aa22.24■■□□□ 1.15
PABPC4-203ENST00000372858 JPH4Q96JJ6 628 aa22.24■■□□□ 1.15
PABPC4-203ENST00000372858 MAGI1Q96QZ7 1491 aaPredicted RBP22.23■■□□□ 1.15
PABPC4-203ENST00000372858 UHRF1BP1Q6BDS2 1440 aa22.23■■□□□ 1.15
PABPC4-203ENST00000372858 ZBTB47Q9UFB7 747 aaPredicted RBP22.22■■□□□ 1.15
PABPC4-203ENST00000372858 KDM2AQ9Y2K7 1162 aa22.22■■□□□ 1.15
PABPC4-203ENST00000372858 RALGAPBQ86X10 1494 aa22.22■■□□□ 1.15
PABPC4-203ENST00000372858 CEP170Q5SW79 1584 aa22.2■■□□□ 1.14
PABPC4-203ENST00000372858 SYNJ2O15056 1496 aa22.2■■□□□ 1.14
PABPC4-203ENST00000372858 C9orf84Q5VXU9 1444 aa22.2■■□□□ 1.14
PABPC4-203ENST00000372858 KIF15Q9NS87 1388 aa22.2■■□□□ 1.14
PABPC4-203ENST00000372858 ST20-MTHFSA0A0A6YYL1 179 aa22.18■■□□□ 1.14
PABPC4-203ENST00000372858 DCAF11Q8TEB1 546 aa22.17■■□□□ 1.14
PABPC4-203ENST00000372858 ARHGEF12Q9NZN5 1544 aa22.17■■□□□ 1.14
PABPC4-203ENST00000372858 SHANK2Q9UPX8 1470 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms