RNA–Protein interactions for RNA: ENST00000372856.7

PABPC4-201, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC4, Length 3,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-201ENST00000372856 MYT1LQ9UL68 1186 aa21.78■■□□□ 1.08
PABPC4-201ENST00000372856 FAM9BQ8IZU0 186 aa21.77■■□□□ 1.07
PABPC4-201ENST00000372856 CNTLNQ9NXG0 1405 aa21.76■■□□□ 1.07
PABPC4-201ENST00000372856 HECW1Q76N89 1606 aa21.75■■□□□ 1.07
PABPC4-201ENST00000372856 NBPF8Q3BBV2 869 aa21.74■■□□□ 1.07
PABPC4-201ENST00000372856 GCC2Q8IWJ2 1684 aa21.74■■□□□ 1.07
PABPC4-201ENST00000372856 AKNAQ7Z591 1439 aa21.74■■□□□ 1.07
PABPC4-201ENST00000372856 PRKRIP1Q9H875 184 aaPredicted RBP21.73■■□□□ 1.07
PABPC4-201ENST00000372856 CDK11AQ9UQ88 783 aaPredicted RBP21.73■■□□□ 1.07
PABPC4-201ENST00000372856 CCDC7Q96M83 1385 aa21.72■■□□□ 1.07
PABPC4-201ENST00000372856 MIA2Q96PC5 1412 aa21.72■■□□□ 1.07
PABPC4-201ENST00000372856 MRS2Q9HD23 443 aa21.72■■□□□ 1.07
PABPC4-201ENST00000372856 ZNF644Q9H582 1327 aaPredicted RBP21.71■■□□□ 1.07
PABPC4-201ENST00000372856 NCOA1Q15788 1441 aa21.69■■□□□ 1.06
PABPC4-201ENST00000372856 TARBP1Q13395 1621 aaKnown RBP21.69■■□□□ 1.06
PABPC4-201ENST00000372856 IQGAP2Q13576 1575 aa21.69■■□□□ 1.06
PABPC4-201ENST00000372856 KIF21AQ7Z4S6 1674 aa21.69■■□□□ 1.06
PABPC4-201ENST00000372856 SLC4A1APQ9BWU0 796 aaKnown RBP21.68■■□□□ 1.06
PABPC4-201ENST00000372856 IL27Q8NEV9 243 aa21.68■■□□□ 1.06
PABPC4-201ENST00000372856 ANKRD30BQ9BXX2 1392 aa21.67■■□□□ 1.06
PABPC4-201ENST00000372856 CNGB1Q14028 1251 aaPredicted RBP21.66■■□□□ 1.06
PABPC4-201ENST00000372856 DAPK1P53355 1430 aa21.64■■□□□ 1.06
PABPC4-201ENST00000372856 WDR62O43379 1518 aa21.64■■□□□ 1.05
PABPC4-201ENST00000372856 KIF7Q2M1P5 1343 aa21.64■■□□□ 1.05
PABPC4-201ENST00000372856 RPRD2Q5VT52 1461 aaKnown RBP21.63■■□□□ 1.05
PABPC4-201ENST00000372856 UBE2Q2Q8WVN8 375 aa21.62■■□□□ 1.05
PABPC4-201ENST00000372856 PPP4R2Q9NY27 417 aa21.62■■□□□ 1.05
PABPC4-201ENST00000372856 ABCC5O15440 1437 aa21.62■■□□□ 1.05
PABPC4-201ENST00000372856 ROCK1Q13464 1354 aa21.59■■□□□ 1.05
PABPC4-201ENST00000372856 ERICH6BQ5W0A0 696 aa21.59■■□□□ 1.05
PABPC4-201ENST00000372856 B4GALNT3Q6L9W6 998 aa21.59■■□□□ 1.05
PABPC4-201ENST00000372856 POLR3GLQ9BT43 218 aa21.59■■□□□ 1.05
PABPC4-201ENST00000372856 TEX14Q8IWB6 1497 aa21.59■■□□□ 1.05
PABPC4-201ENST00000372856 ZBED9Q6R2W3 1325 aa21.58■■□□□ 1.05
PABPC4-201ENST00000372856 PBRM1Q86U86 1689 aa21.58■■□□□ 1.04
PABPC4-201ENST00000372856 ADAMTS12P58397 1594 aa21.57■■□□□ 1.04
PABPC4-201ENST00000372856 ZNF326Q5BKZ1 582 aaKnown RBP21.57■■□□□ 1.04
PABPC4-201ENST00000372856 SPATA31E1Q6ZUB1 1445 aa21.56■■□□□ 1.04
PABPC4-201ENST00000372856 ZNF777Q9ULD5 760 aaPredicted RBP21.52■■□□□ 1.04
PABPC4-201ENST00000372856 PAK3O75914 559 aaPredicted RBP21.51■■□□□ 1.03
PABPC4-201ENST00000372856 NUP153P49790 1475 aaKnown RBP21.51■■□□□ 1.03
PABPC4-201ENST00000372856 DNMT1P26358 1616 aaKnown RBP21.51■■□□□ 1.03
PABPC4-201ENST00000372856 SENP3-EIF4A1A0A087X0R7 540 aa21.5■■□□□ 1.03
PABPC4-201ENST00000372856 CFDP1Q9UEE9 299 aaPredicted RBP21.5■■□□□ 1.03
PABPC4-201ENST00000372856 NOP58Q9Y2X3 529 aaKnown RBP21.49■■□□□ 1.03
PABPC4-201ENST00000372856 ZNF608Q9ULD9 1512 aaPredicted RBP21.49■■□□□ 1.03
PABPC4-201ENST00000372856 EIF5BO60841 1220 aaKnown RBP21.48■■□□□ 1.03
PABPC4-201ENST00000372856 DISP1Q96F81 1524 aa21.48■■□□□ 1.03
PABPC4-201ENST00000372856 PRG4Q92954 1404 aaPredicted RBP21.47■■□□□ 1.03
PABPC4-201ENST00000372856 RTL5Q5HYW3 569 aaPredicted RBP21.47■■□□□ 1.03
PABPC4-201ENST00000372856 PZPP20742 1482 aa21.46■■□□□ 1.03
PABPC4-201ENST00000372856 PKD2Q13563 968 aa21.45■■□□□ 1.02
PABPC4-201ENST00000372856 KIAA0586Q9BVV6 1533 aa21.45■■□□□ 1.02
PABPC4-201ENST00000372856 USP47Q96K76 1375 aa21.44■■□□□ 1.02
PABPC4-201ENST00000372856 KIAA0556O60303 1618 aa21.44■■□□□ 1.02
PABPC4-201ENST00000372856 MRC2Q9UBG0 1479 aa21.43■■□□□ 1.02
PABPC4-201ENST00000372856 DHX29Q7Z478 1369 aaKnown RBP21.43■■□□□ 1.02
PABPC4-201ENST00000372856 CAMSAP2Q08AD1 1489 aa21.4■■□□□ 1.02
PABPC4-201ENST00000372856 RAPGEF6Q8TEU7 1601 aa21.39■■□□□ 1.02
PABPC4-201ENST00000372856 TROQ12816 1431 aaPredicted RBP21.39■■□□□ 1.01
PABPC4-201ENST00000372856 KIAA1107Q9UPP5 1409 aa21.39■■□□□ 1.01
PABPC4-201ENST00000372856 GPATCH8Q9UKJ3 1502 aaKnown RBP21.36■■□□□ 1.01
PABPC4-201ENST00000372856 PLB1Q6P1J6 1458 aa21.36■■□□□ 1.01
PABPC4-201ENST00000372856 NUDCQ9Y266 331 aa21.36■■□□□ 1.01
PABPC4-201ENST00000372856 MBD5Q9P267 1494 aa21.35■■□□□ 1.01
PABPC4-201ENST00000372856 SMG6Q86US8 1419 aaKnown RBP21.35■■□□□ 1.01
PABPC4-201ENST00000372856 IFT140Q96RY7 1462 aa21.34■■□□□ 1.01
PABPC4-201ENST00000372856 FBLN2P98095 1184 aa21.34■■□□□ 1.01
PABPC4-201ENST00000372856 GRIN2AQ12879 1464 aa21.34■■□□□ 1.01
PABPC4-201ENST00000372856 BCORL1Q5H9F3 1711 aa21.33■■□□□ 1.01
PABPC4-201ENST00000372856 ANKRD30AQ9BXX3 1397 aa21.33■■□□□ 1
PABPC4-201ENST00000372856 KDM2AQ9Y2K7 1162 aa21.33■■□□□ 1
PABPC4-201ENST00000372856 TMC1Q8TDI8 760 aa21.32■■□□□ 1
PABPC4-201ENST00000372856 CARD11Q9BXL7 1154 aa21.32■■□□□ 1
PABPC4-201ENST00000372856 POLR1AO95602 1720 aaPredicted RBP21.32■■□□□ 1
PABPC4-201ENST00000372856 ANKRD50Q9ULJ7 1429 aa21.31■■□□□ 1
PABPC4-201ENST00000372856 CHMP7Q8WUX9 453 aaPredicted RBP21.31■■□□□ 1
PABPC4-201ENST00000372856 PNISRQ8TF01 805 aaKnown RBP21.3■■□□□ 1
PABPC4-201ENST00000372856 NUP155O75694 1391 aa21.3■■□□□ 1
PABPC4-201ENST00000372856 KIF14Q15058 1648 aa21.29■■□□□ 1
PABPC4-201ENST00000372856 ADGRL2O95490 1459 aa21.27■■□□□ 1
PABPC4-201ENST00000372856 ST20-MTHFSA0A0A6YYL1 179 aa21.26■□□□□ 0.99
PABPC4-201ENST00000372856 ARID4BQ4LE39 1312 aaPredicted RBP21.26■□□□□ 0.99
PABPC4-201ENST00000372856 KDM5CP41229 1560 aa21.25■□□□□ 0.99
PABPC4-201ENST00000372856 RNF123Q5XPI4 1314 aa21.24■□□□□ 0.99
PABPC4-201ENST00000372856 DCAF11Q8TEB1 546 aa21.23■□□□□ 0.99
PABPC4-201ENST00000372856 PLEKHD1A6NEE1 506 aa21.23■□□□□ 0.99
PABPC4-201ENST00000372856 ADGBQ8N7X0 1667 aa21.23■□□□□ 0.99
PABPC4-201ENST00000372856 ITSN2Q9NZM3 1697 aa21.23■□□□□ 0.99
PABPC4-201ENST00000372856 JPH4Q96JJ6 628 aa21.22■□□□□ 0.99
PABPC4-201ENST00000372856 ROCK2O75116 1388 aaKnown RBP21.21■□□□□ 0.99
PABPC4-201ENST00000372856 PKNOX2Q96KN3 472 aa21.21■□□□□ 0.99
PABPC4-201ENST00000372856 TSPY4P0CV99 314 aa21.21■□□□□ 0.99
PABPC4-201ENST00000372856 TSPY10P0CW01 314 aa21.21■□□□□ 0.99
PABPC4-201ENST00000372856 UHRF1BP1Q6BDS2 1440 aa21.2■□□□□ 0.98
PABPC4-201ENST00000372856 RALGAPBQ86X10 1494 aa21.2■□□□□ 0.98
PABPC4-201ENST00000372856 EIF4G3O43432 1585 aaKnown RBP21.2■□□□□ 0.98
PABPC4-201ENST00000372856 KIF15Q9NS87 1388 aa21.2■□□□□ 0.98
PABPC4-201ENST00000372856 C9orf84Q5VXU9 1444 aa21.19■□□□□ 0.98
PABPC4-201ENST00000372856 HNRNPMP52272 730 aaKnown RBP eCLIP21.19■□□□□ 0.981e-6■■■■□ 26
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms