RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 TSHZ2Q9NRE2 1034 aa26.82■■□□□ 1.88
TMEM53-202ENST00000372237 MPHOSPH9Q99550 1183 aa26.79■■□□□ 1.88
TMEM53-202ENST00000372237 NEFLP07196 543 aa26.78■■□□□ 1.88
TMEM53-202ENST00000372237 HSPA5P11021 654 aaKnown RBP26.75■■□□□ 1.87
TMEM53-202ENST00000372237 CARMIL2Q6F5E8 1435 aa26.74■■□□□ 1.87
TMEM53-202ENST00000372237 NUP153P49790 1475 aaKnown RBP26.74■■□□□ 1.87
TMEM53-202ENST00000372237 WASHC2AQ641Q2 1341 aa26.72■■□□□ 1.87
TMEM53-202ENST00000372237 EIF4G2P78344 907 aaKnown RBP eCLIP26.71■■□□□ 1.87
TMEM53-202ENST00000372237 DAPK1P53355 1430 aa26.71■■□□□ 1.87
TMEM53-202ENST00000372237 RAPGEF6Q8TEU7 1601 aa26.7■■□□□ 1.87
TMEM53-202ENST00000372237 ROCK1Q13464 1354 aa26.69■■□□□ 1.86
TMEM53-202ENST00000372237 FOXD1Q16676 465 aa26.68■■□□□ 1.86
TMEM53-202ENST00000372237 L3MBTL2Q969R5 705 aa26.68■■□□□ 1.86
TMEM53-202ENST00000372237 DNMT1P26358 1616 aaKnown RBP26.67■■□□□ 1.86
TMEM53-202ENST00000372237 PLB1Q6P1J6 1458 aa26.66■■□□□ 1.86
TMEM53-202ENST00000372237 ABCC5O15440 1437 aa26.64■■□□□ 1.86
TMEM53-202ENST00000372237 CDK11AQ9UQ88 783 aaPredicted RBP26.64■■□□□ 1.85
TMEM53-202ENST00000372237 ZNF644Q9H582 1327 aaPredicted RBP26.61■■□□□ 1.85
TMEM53-202ENST00000372237 ANKRD30BQ9BXX2 1392 aa26.6■■□□□ 1.85
TMEM53-202ENST00000372237 HNRNPUQ00839 825 aaKnown RBP eCLIP26.6■■□□□ 1.85
TMEM53-202ENST00000372237 RPRD2Q5VT52 1461 aaKnown RBP26.6■■□□□ 1.85
TMEM53-202ENST00000372237 CNTLNQ9NXG0 1405 aa26.58■■□□□ 1.85
TMEM53-202ENST00000372237 PRG4Q92954 1404 aaPredicted RBP26.56■■□□□ 1.84
TMEM53-202ENST00000372237 SLC4A1APQ9BWU0 796 aaKnown RBP26.56■■□□□ 1.84
TMEM53-202ENST00000372237 CHD1O14646 1710 aa26.55■■□□□ 1.84
TMEM53-202ENST00000372237 TEX14Q8IWB6 1497 aa26.53■■□□□ 1.84
TMEM53-202ENST00000372237 NCOA1Q15788 1441 aa26.53■■□□□ 1.84
TMEM53-202ENST00000372237 CCDC7Q96M83 1385 aa26.51■■□□□ 1.83
TMEM53-202ENST00000372237 TROQ12816 1431 aaPredicted RBP26.51■■□□□ 1.83
TMEM53-202ENST00000372237 NBPF8Q3BBV2 869 aa26.51■■□□□ 1.83
TMEM53-202ENST00000372237 ABCA8O94911 1581 aa26.5■■□□□ 1.83
TMEM53-202ENST00000372237 C11orf95C9JLR9 678 aaPredicted RBP26.5■■□□□ 1.83
TMEM53-202ENST00000372237 CAMSAP2Q08AD1 1489 aa26.48■■□□□ 1.83
TMEM53-202ENST00000372237 ITSN2Q9NZM3 1697 aa26.48■■□□□ 1.83
TMEM53-202ENST00000372237 CFDP1Q9UEE9 299 aaPredicted RBP26.48■■□□□ 1.83
TMEM53-202ENST00000372237 PTPRGP23470 1445 aa26.47■■□□□ 1.83
TMEM53-202ENST00000372237 PRKRIP1Q9H875 184 aaPredicted RBP26.44■■□□□ 1.82
TMEM53-202ENST00000372237 ATP10BO94823 1461 aa26.43■■□□□ 1.82
TMEM53-202ENST00000372237 ADGBQ8N7X0 1667 aa26.43■■□□□ 1.82
TMEM53-202ENST00000372237 PZPP20742 1482 aa26.42■■□□□ 1.82
TMEM53-202ENST00000372237 GPATCH8Q9UKJ3 1502 aaKnown RBP26.42■■□□□ 1.82
TMEM53-202ENST00000372237 CCDC184Q52MB2 194 aa26.42■■□□□ 1.82
TMEM53-202ENST00000372237 SPATA31E1Q6ZUB1 1445 aa26.41■■□□□ 1.82
TMEM53-202ENST00000372237 ZNF777Q9ULD5 760 aaPredicted RBP26.4■■□□□ 1.82
TMEM53-202ENST00000372237 POLR1AO95602 1720 aaPredicted RBP26.4■■□□□ 1.82
TMEM53-202ENST00000372237 PLEKHD1A6NEE1 506 aa26.4■■□□□ 1.82
TMEM53-202ENST00000372237 SHROOM2Q13796 1616 aa26.4■■□□□ 1.82
TMEM53-202ENST00000372237 ADCY10Q96PN6 1610 aa26.4■■□□□ 1.82
TMEM53-202ENST00000372237 KIF14Q15058 1648 aa26.39■■□□□ 1.82
TMEM53-202ENST00000372237 KIF7Q2M1P5 1343 aa26.38■■□□□ 1.81
TMEM53-202ENST00000372237 ADGRL2O95490 1459 aa26.36■■□□□ 1.81
TMEM53-202ENST00000372237 CROCC2H7BZ55 1655 aa26.36■■□□□ 1.81
TMEM53-202ENST00000372237 MRS2Q9HD23 443 aa26.36■■□□□ 1.81
TMEM53-202ENST00000372237 FAM9BQ8IZU0 186 aa26.34■■□□□ 1.81
TMEM53-202ENST00000372237 RBM19Q9Y4C8 960 aaKnown RBP26.34■■□□□ 1.81
TMEM53-202ENST00000372237 KIAA1107Q9UPP5 1409 aa26.34■■□□□ 1.81
TMEM53-202ENST00000372237 ANKRD30AQ9BXX3 1397 aa26.33■■□□□ 1.81
TMEM53-202ENST00000372237 IRX6P78412 446 aaPredicted RBP26.31■■□□□ 1.8
TMEM53-202ENST00000372237 ANP32EQ9BTT0 268 aa26.31■■□□□ 1.8
TMEM53-202ENST00000372237 ERCC6L2Q5T890 1561 aa26.29■■□□□ 1.8
TMEM53-202ENST00000372237 PKD2Q13563 968 aa26.29■■□□□ 1.8
TMEM53-202ENST00000372237 MBD5Q9P267 1494 aa26.29■■□□□ 1.8
TMEM53-202ENST00000372237 ANKRD50Q9ULJ7 1429 aa26.27■■□□□ 1.8
TMEM53-202ENST00000372237 CLASP1Q7Z460 1538 aa26.27■■□□□ 1.8
TMEM53-202ENST00000372237 ABCC10Q5T3U5 1492 aa26.25■■□□□ 1.79
TMEM53-202ENST00000372237 ZNF326Q5BKZ1 582 aaKnown RBP26.25■■□□□ 1.79
TMEM53-202ENST00000372237 ZBED9Q6R2W3 1325 aa26.25■■□□□ 1.79
TMEM53-202ENST00000372237 CDC42BPAQ5VT25 1732 aa26.23■■□□□ 1.79
TMEM53-202ENST00000372237 ERICH6BQ5W0A0 696 aa26.23■■□□□ 1.79
TMEM53-202ENST00000372237 USP47Q96K76 1375 aa26.23■■□□□ 1.79
TMEM53-202ENST00000372237 SHANK2Q9UPX8 1470 aa26.19■■□□□ 1.78
TMEM53-202ENST00000372237 C9orf84Q5VXU9 1444 aa26.18■■□□□ 1.78
TMEM53-202ENST00000372237 BCORL1Q5H9F3 1711 aa26.18■■□□□ 1.78
TMEM53-202ENST00000372237 NUP155O75694 1391 aa26.17■■□□□ 1.78
TMEM53-202ENST00000372237 POLR3GLQ9BT43 218 aa26.16■■□□□ 1.78
TMEM53-202ENST00000372237 KDM5CP41229 1560 aa26.16■■□□□ 1.78
TMEM53-202ENST00000372237 ABCC2Q92887 1545 aa26.16■■□□□ 1.78
TMEM53-202ENST00000372237 DHX29Q7Z478 1369 aaKnown RBP26.15■■□□□ 1.78
TMEM53-202ENST00000372237 TSPY4P0CV99 314 aa26.14■■□□□ 1.78
TMEM53-202ENST00000372237 TSPY10P0CW01 314 aa26.14■■□□□ 1.78
TMEM53-202ENST00000372237 PPP4R2Q9NY27 417 aa26.14■■□□□ 1.78
TMEM53-202ENST00000372237 ARID4BQ4LE39 1312 aaPredicted RBP26.13■■□□□ 1.77
TMEM53-202ENST00000372237 UHRF1BP1Q6BDS2 1440 aa26.12■■□□□ 1.77
TMEM53-202ENST00000372237 CNGB1Q14028 1251 aaPredicted RBP26.1■■□□□ 1.77
TMEM53-202ENST00000372237 RALGAPBQ86X10 1494 aa26.1■■□□□ 1.77
TMEM53-202ENST00000372237 KDM5DQ9BY66 1539 aa26.08■■□□□ 1.77
TMEM53-202ENST00000372237 ARHGEF12Q9NZN5 1544 aa26.08■■□□□ 1.77
TMEM53-202ENST00000372237 CARD11Q9BXL7 1154 aa26.06■■□□□ 1.76
TMEM53-202ENST00000372237 KIF15Q9NS87 1388 aa26.06■■□□□ 1.76
TMEM53-202ENST00000372237 ROCK2O75116 1388 aaKnown RBP26.05■■□□□ 1.76
TMEM53-202ENST00000372237 HNRNPMP52272 730 aaKnown RBP eCLIP26.05■■□□□ 1.76
TMEM53-202ENST00000372237 UHRF1BP1LA0JNW5 1464 aa26.04■■□□□ 1.76
TMEM53-202ENST00000372237 ARHGEF5Q12774 1597 aa26.03■■□□□ 1.76
TMEM53-202ENST00000372237 KDM2AQ9Y2K7 1162 aa26.02■■□□□ 1.76
TMEM53-202ENST00000372237 DCAF11Q8TEB1 546 aa25.98■■□□□ 1.75
TMEM53-202ENST00000372237 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.98■■□□□ 1.75
TMEM53-202ENST00000372237 SMG6Q86US8 1419 aaKnown RBP25.98■■□□□ 1.75
TMEM53-202ENST00000372237 B4GALNT3Q6L9W6 998 aa25.97■■□□□ 1.75
TMEM53-202ENST00000372237 PREX2Q70Z35 1606 aa25.97■■□□□ 1.75
TMEM53-202ENST00000372237 CCDC141Q6ZP82 1450 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms