RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 SETD5Q9C0A6 1442 aa30.53■■■□□ 2.48
RAPGEF1-203ENST00000372195 CHMP4BQ9H444 224 aaKnown RBP30.52■■■□□ 2.48
RAPGEF1-203ENST00000372195 MSNP26038 577 aaKnown RBP30.52■■■□□ 2.48
RAPGEF1-203ENST00000372195 DRC7Q8IY82 874 aa30.52■■■□□ 2.48
RAPGEF1-203ENST00000372195 SLKQ9H2G2 1235 aaPredicted RBP30.51■■■□□ 2.47
RAPGEF1-203ENST00000372195 PNNQ9H307 717 aaKnown RBP30.51■■■□□ 2.47
RAPGEF1-203ENST00000372195 PKD2Q13563 968 aa30.49■■■□□ 2.47
RAPGEF1-203ENST00000372195 GOLGA2Q08379 1002 aa30.49■■■□□ 2.47
RAPGEF1-203ENST00000372195 L1TD1Q5T7N2 865 aaKnown RBP30.45■■■□□ 2.47
RAPGEF1-203ENST00000372195 RCAN3Q9UKA8 241 aa30.45■■■□□ 2.47
RAPGEF1-203ENST00000372195 KTN1Q86UP2 1357 aaKnown RBP30.45■■■□□ 2.47
RAPGEF1-203ENST00000372195 ITPRIPQ8IWB1 547 aa30.44■■■□□ 2.46
RAPGEF1-203ENST00000372195 ERCC6Q03468 1493 aa30.43■■■□□ 2.46
RAPGEF1-203ENST00000372195 CARMIL1Q5VZK9 1371 aa30.43■■■□□ 2.46
RAPGEF1-203ENST00000372195 CUX2O14529 1486 aa30.43■■■□□ 2.46
RAPGEF1-203ENST00000372195 MCCP23508 829 aa30.42■■■□□ 2.46
RAPGEF1-203ENST00000372195 FHAD1B1AJZ9 1412 aa30.41■■■□□ 2.46
RAPGEF1-203ENST00000372195 ABCC8Q09428 1581 aa30.41■■■□□ 2.46
RAPGEF1-203ENST00000372195 ARHGAP35Q9NRY4 1499 aa30.4■■■□□ 2.46
RAPGEF1-203ENST00000372195 KANK1Q14678 1352 aa30.4■■■□□ 2.46
RAPGEF1-203ENST00000372195 TSHZ2Q9NRE2 1034 aa30.39■■■□□ 2.46
RAPGEF1-203ENST00000372195 GGT6Q6P531 493 aa30.39■■■□□ 2.46
RAPGEF1-203ENST00000372195 ROCK2O75116 1388 aaKnown RBP30.38■■■□□ 2.45
RAPGEF1-203ENST00000372195 RTF1Q92541 710 aaKnown RBP30.38■■■□□ 2.45
RAPGEF1-203ENST00000372195 CECR2Q9BXF3 1484 aa30.37■■■□□ 2.45
RAPGEF1-203ENST00000372195 CHAF1AQ13111 956 aaPredicted RBP30.37■■■□□ 2.45
RAPGEF1-203ENST00000372195 CCDC146Q8IYE0 955 aa30.37■■■□□ 2.45
RAPGEF1-203ENST00000372195 U2AF1L5P0DN76 240 aaPredicted RBP30.36■■■□□ 2.45
RAPGEF1-203ENST00000372195 U2AF1Q01081 240 aaKnown RBP eCLIP30.36■■■□□ 2.45
RAPGEF1-203ENST00000372195 FOXD4L1Q9NU39 408 aa30.35■■■□□ 2.45
RAPGEF1-203ENST00000372195 RAB3GAP2Q9H2M9 1393 aa30.35■■■□□ 2.45
RAPGEF1-203ENST00000372195 MFAP1P55081 439 aaKnown RBP30.34■■■□□ 2.45
RAPGEF1-203ENST00000372195 CLSTN1O94985 981 aa30.32■■■□□ 2.44
RAPGEF1-203ENST00000372195 ISY1Q9ULR0 285 aaKnown RBP30.31■■■□□ 2.44
RAPGEF1-203ENST00000372195 MPHOSPH9Q99550 1183 aa30.31■■■□□ 2.44
RAPGEF1-203ENST00000372195 PAK3O75914 559 aaPredicted RBP30.3■■■□□ 2.44
RAPGEF1-203ENST00000372195 NRDCO43847 1150 aa30.29■■■□□ 2.44
RAPGEF1-203ENST00000372195 NCBP3Q53F19 620 aaKnown RBP30.28■■■□□ 2.44
RAPGEF1-203ENST00000372195 ZNF330Q9Y3S2 320 aaPredicted RBP30.28■■■□□ 2.44
RAPGEF1-203ENST00000372195 GNL2Q13823 731 aaKnown RBP30.27■■■□□ 2.44
RAPGEF1-203ENST00000372195 NUTM2DQ5VT03 806 aaPredicted RBP30.27■■■□□ 2.44
RAPGEF1-203ENST00000372195 CLUAP1Q96AJ1 413 aa30.25■■■□□ 2.43
RAPGEF1-203ENST00000372195 NOL8Q76FK4 1167 aaKnown RBP30.25■■■□□ 2.43
RAPGEF1-203ENST00000372195 VPS8Q8N3P4 1428 aa30.24■■■□□ 2.43
RAPGEF1-203ENST00000372195 HDGFL2Q7Z4V5 671 aaPredicted RBP30.24■■■□□ 2.43
RAPGEF1-203ENST00000372195 KIAA1211Q6ZU35 1233 aa30.23■■■□□ 2.43
RAPGEF1-203ENST00000372195 RWDD1Q9H446 243 aaPredicted RBP30.23■■■□□ 2.43
RAPGEF1-203ENST00000372195 IPO8O15397 1037 aaKnown RBP30.22■■■□□ 2.43
RAPGEF1-203ENST00000372195 TIMELESSQ9UNS1 1208 aa30.22■■■□□ 2.43
RAPGEF1-203ENST00000372195 GBP4Q96PP9 640 aa30.2■■■□□ 2.43
RAPGEF1-203ENST00000372195 TCERG1O14776 1098 aaKnown RBP30.18■■■□□ 2.42
RAPGEF1-203ENST00000372195 NACADO15069 1562 aa30.17■■■□□ 2.42
RAPGEF1-203ENST00000372195 NUP155O75694 1391 aa30.17■■■□□ 2.42
RAPGEF1-203ENST00000372195 BAZ1AQ9NRL2 1556 aaPredicted RBP30.17■■■□□ 2.42
RAPGEF1-203ENST00000372195 RALBP1Q15311 655 aa30.17■■■□□ 2.42
RAPGEF1-203ENST00000372195 SMC4Q9NTJ3 1288 aa30.17■■■□□ 2.42
RAPGEF1-203ENST00000372195 FOXD4L5Q5VV16 416 aaPredicted RBP30.15■■■□□ 2.42
RAPGEF1-203ENST00000372195 FOXD4L4Q8WXT5 416 aaPredicted RBP30.15■■■□□ 2.42
RAPGEF1-203ENST00000372195 CCDC88BA6NC98 1476 aa30.14■■■□□ 2.42
RAPGEF1-203ENST00000372195 TRIM6-TRIM34B2RNG4 842 aa30.14■■■□□ 2.41
RAPGEF1-203ENST00000372195 IPO9Q96P70 1041 aaKnown RBP30.13■■■□□ 2.41
RAPGEF1-203ENST00000372195 TRHP20396 242 aaPredicted RBP30.13■■■□□ 2.41
RAPGEF1-203ENST00000372195 SLC4A10Q6U841 1118 aa30.11■■■□□ 2.41
RAPGEF1-203ENST00000372195 HSP90B1P14625 803 aaKnown RBP30.1■■■□□ 2.41
RAPGEF1-203ENST00000372195 L3MBTL2Q969R5 705 aa30.09■■■□□ 2.41
RAPGEF1-203ENST00000372195 SLC4A3P48751 1232 aa30.09■■■□□ 2.41
RAPGEF1-203ENST00000372195 CHMP3Q9Y3E7 222 aa30.09■■■□□ 2.41
RAPGEF1-203ENST00000372195 RRP7AQ9Y3A4 280 aaKnown RBP30.09■■■□□ 2.41
RAPGEF1-203ENST00000372195 PMFBP1Q8TBY8 1022 aa30.08■■■□□ 2.41
RAPGEF1-203ENST00000372195 GOLGA6L3A6NEY3 463 aa30.08■■■□□ 2.41
RAPGEF1-203ENST00000372195 HNRNPMP52272 730 aaKnown RBP eCLIP30.07■■■□□ 2.45e-6■■■□□ 17.8
RAPGEF1-203ENST00000372195 CSB-PGBD3P0DP91 1061 aa30.06■■■□□ 2.4
RAPGEF1-203ENST00000372195 HDGFP51858 240 aaKnown RBP30.06■■■□□ 2.4
RAPGEF1-203ENST00000372195 PLIN1O60240 522 aa30.06■■■□□ 2.4
RAPGEF1-203ENST00000372195 KIAA2012Q0VF49 1180 aa30.04■■■□□ 2.4
RAPGEF1-203ENST00000372195 CFAP44Q96MT7 982 aa30.03■■■□□ 2.4
RAPGEF1-203ENST00000372195 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30■■■□□ 2.39
RAPGEF1-203ENST00000372195 NUTM2FA1L443 756 aa29.99■■■□□ 2.39
RAPGEF1-203ENST00000372195 CENPJQ9HC77 1338 aaPredicted RBP29.98■■■□□ 2.39
RAPGEF1-203ENST00000372195 BCL2L13Q9BXK5 485 aa29.97■■■□□ 2.39
RAPGEF1-203ENST00000372195 CALD1Q05682 793 aaKnown RBP29.97■■■□□ 2.39
RAPGEF1-203ENST00000372195 STK31Q9BXU1 1019 aa29.95■■■□□ 2.39
RAPGEF1-203ENST00000372195 PTMSP20962 102 aa29.95■■■□□ 2.38
RAPGEF1-203ENST00000372195 LTV1Q96GA3 475 aaPredicted RBP29.95■■■□□ 2.38
RAPGEF1-203ENST00000372195 GORABQ5T7V8 394 aa29.94■■■□□ 2.38
RAPGEF1-203ENST00000372195 CREBRFQ8IUR6 639 aa29.94■■■□□ 2.38
RAPGEF1-203ENST00000372195 MROH2BQ7Z745 1585 aa29.93■■■□□ 2.38
RAPGEF1-203ENST00000372195 CCDC9Q9Y3X0 531 aaKnown RBP29.93■■■□□ 2.38
RAPGEF1-203ENST00000372195 KIF3BO15066 747 aa29.92■■■□□ 2.38
RAPGEF1-203ENST00000372195 TDRD9Q8NDG6 1382 aaKnown RBP29.92■■■□□ 2.38
RAPGEF1-203ENST00000372195 ANKRD30AQ9BXX3 1397 aa29.92■■■□□ 2.38
RAPGEF1-203ENST00000372195 PDE4CQ08493 712 aa29.92■■■□□ 2.38
RAPGEF1-203ENST00000372195 FOXD4L6Q3SYB3 417 aaPredicted RBP29.92■■■□□ 2.38
RAPGEF1-203ENST00000372195 FOXD4L3Q6VB84 417 aaPredicted RBP29.92■■■□□ 2.38
RAPGEF1-203ENST00000372195 SYAP1Q96A49 352 aaPredicted RBP29.9■■■□□ 2.38
RAPGEF1-203ENST00000372195 SPAG9O60271 1321 aaKnown RBP29.9■■■□□ 2.38
RAPGEF1-203ENST00000372195 ELL2O00472 640 aaPredicted RBP29.89■■■□□ 2.38
RAPGEF1-203ENST00000372195 FHOD3Q2V2M9 1422 aa29.89■■■□□ 2.38
RAPGEF1-203ENST00000372195 FMN1Q68DA7 1419 aa29.89■■■□□ 2.37
RAPGEF1-203ENST00000372195 EIF3AQ14152 1382 aaKnown RBP29.88■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms