RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 MAPK8IP3Q9UPT6 1336 aa19.24■□□□□ 0.67
GTF3C4-201ENST00000372146 MAP7D2Q96T17 732 aa19.24■□□□□ 0.67
GTF3C4-201ENST00000372146 CALD1Q05682 793 aaKnown RBP19.23■□□□□ 0.67
GTF3C4-201ENST00000372146 CFAP44Q96MT7 982 aa19.23■□□□□ 0.67
GTF3C4-201ENST00000372146 NPHP1O15259 732 aa19.22■□□□□ 0.67
GTF3C4-201ENST00000372146 KIAA1211Q6ZU35 1233 aa19.22■□□□□ 0.67
GTF3C4-201ENST00000372146 ANO8Q9HCE9 1232 aaPredicted RBP19.22■□□□□ 0.67
GTF3C4-201ENST00000372146 ISY1Q9ULR0 285 aaKnown RBP19.21■□□□□ 0.67
GTF3C4-201ENST00000372146 CCDC70Q6NSX1 233 aa19.2■□□□□ 0.66
GTF3C4-201ENST00000372146 ZNF592Q92610 1267 aa19.19■□□□□ 0.66
GTF3C4-201ENST00000372146 CSPP1Q1MSJ5 1256 aa19.19■□□□□ 0.66
GTF3C4-201ENST00000372146 CEP89Q96ST8 783 aa19.17■□□□□ 0.66
GTF3C4-201ENST00000372146 GSE1Q14687 1217 aa19.15■□□□□ 0.66
GTF3C4-201ENST00000372146 DDX11L8A8MPP1 907 aa19.14■□□□□ 0.65
GTF3C4-201ENST00000372146 RDXP35241 583 aaKnown RBP19.14■□□□□ 0.65
GTF3C4-201ENST00000372146 CCDC34Q96HJ3 373 aa19.12■□□□□ 0.65
GTF3C4-201ENST00000372146 FOXD4L1Q9NU39 408 aa19.12■□□□□ 0.65
GTF3C4-201ENST00000372146 PES1O00541 588 aaKnown RBP19.11■□□□□ 0.65
GTF3C4-201ENST00000372146 TSHZ2Q9NRE2 1034 aa19.11■□□□□ 0.65
GTF3C4-201ENST00000372146 APBB1O00213 710 aa19.1■□□□□ 0.65
GTF3C4-201ENST00000372146 CWC15Q9P013 229 aaKnown RBP19.1■□□□□ 0.65
GTF3C4-201ENST00000372146 MFAP1P55081 439 aaKnown RBP19.09■□□□□ 0.65
GTF3C4-201ENST00000372146 TSR1Q2NL82 804 aaKnown RBP19.08■□□□□ 0.65
GTF3C4-201ENST00000372146 CC2D1BQ5T0F9 858 aaKnown RBP19.08■□□□□ 0.65
GTF3C4-201ENST00000372146 ZCCHC6Q5VYS8 1495 aaKnown RBP19.08■□□□□ 0.64
GTF3C4-201ENST00000372146 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.08■□□□□ 0.64
GTF3C4-201ENST00000372146 CCDC191Q8NCU4 936 aa19.07■□□□□ 0.64
GTF3C4-201ENST00000372146 RASSF8Q8NHQ8 419 aa19.07■□□□□ 0.64
GTF3C4-201ENST00000372146 GOLGA6L19H0YKK7 550 aa19.06■□□□□ 0.64
GTF3C4-201ENST00000372146 STK11IPQ8N1F8 1099 aa19.06■□□□□ 0.64
GTF3C4-201ENST00000372146 PLCD4Q9BRC7 762 aa19.06■□□□□ 0.64
GTF3C4-201ENST00000372146 H0YHG0 523 aa19.06■□□□□ 0.64
GTF3C4-201ENST00000372146 TCERG1O14776 1098 aaKnown RBP19.06■□□□□ 0.64
GTF3C4-201ENST00000372146 PRKCSHP14314 528 aaPredicted RBP19.06■□□□□ 0.64
GTF3C4-201ENST00000372146 FOXD4L5Q5VV16 416 aaPredicted RBP19.06■□□□□ 0.64
GTF3C4-201ENST00000372146 FOXD4L4Q8WXT5 416 aaPredicted RBP19.06■□□□□ 0.64
GTF3C4-201ENST00000372146 AK7Q96M32 723 aa19.05■□□□□ 0.64
GTF3C4-201ENST00000372146 HSP90AB3PQ58FF7 597 aa19.04■□□□□ 0.64
GTF3C4-201ENST00000372146 RUFY1Q96T51 708 aa19.04■□□□□ 0.64
GTF3C4-201ENST00000372146 CDCA8Q53HL2 280 aa19.04■□□□□ 0.64
GTF3C4-201ENST00000372146 HMMRO75330 724 aa19.04■□□□□ 0.64
GTF3C4-201ENST00000372146 KIF16BQ96L93 1317 aa19.03■□□□□ 0.64
GTF3C4-201ENST00000372146 CCDC66A2RUB6 948 aa19.03■□□□□ 0.64
GTF3C4-201ENST00000372146 TPD52L1Q16890 204 aaPredicted RBP19.03■□□□□ 0.64
GTF3C4-201ENST00000372146 NOL8Q76FK4 1167 aaKnown RBP19.03■□□□□ 0.64
GTF3C4-201ENST00000372146 NUDCQ9Y266 331 aa19.03■□□□□ 0.64
GTF3C4-201ENST00000372146 MEX3CQ5U5Q3 659 aaKnown RBP19.02■□□□□ 0.64
GTF3C4-201ENST00000372146 FAM43AQ8N2R8 423 aa18.99■□□□□ 0.63
GTF3C4-201ENST00000372146 U2SURPO15042 1029 aaKnown RBP18.99■□□□□ 0.63
GTF3C4-201ENST00000372146 TPM1P09493 284 aa18.99■□□□□ 0.63
GTF3C4-201ENST00000372146 HAP1P54257 671 aaPredicted RBP18.99■□□□□ 0.63
GTF3C4-201ENST00000372146 BCL11BQ9C0K0 894 aaPredicted RBP18.99■□□□□ 0.63
GTF3C4-201ENST00000372146 HOMER1Q86YM7 354 aa18.97■□□□□ 0.63
GTF3C4-201ENST00000372146 MAPK8IP2Q13387 824 aaPredicted RBP18.97■□□□□ 0.63
GTF3C4-201ENST00000372146 MTERF4Q7Z6M4 381 aaKnown RBP18.97■□□□□ 0.63
GTF3C4-201ENST00000372146 ARGLU1Q9NWB6 273 aaPredicted RBP18.96■□□□□ 0.63
GTF3C4-201ENST00000372146 TRIM6-TRIM34B2RNG4 842 aa18.96■□□□□ 0.63
GTF3C4-201ENST00000372146 HSP90B2PQ58FF3 399 aa18.95■□□□□ 0.62
GTF3C4-201ENST00000372146 PPP1R15AO75807 674 aaPredicted RBP18.95■□□□□ 0.62
GTF3C4-201ENST00000372146 ITPRIPQ8IWB1 547 aa18.95■□□□□ 0.62
GTF3C4-201ENST00000372146 DDX49Q9Y6V7 483 aaKnown RBP18.95■□□□□ 0.62
GTF3C4-201ENST00000372146 ST18O60284 1047 aa18.95■□□□□ 0.62
GTF3C4-201ENST00000372146 SKOR2Q2VWA4 1001 aaPredicted RBP18.95■□□□□ 0.62
GTF3C4-201ENST00000372146 CARD11Q9BXL7 1154 aa18.95■□□□□ 0.62
GTF3C4-201ENST00000372146 BECN2A8MW95 431 aa18.94■□□□□ 0.62
GTF3C4-201ENST00000372146 RRP7BPQ9NSQ0 103 aa18.94■□□□□ 0.62
GTF3C4-201ENST00000372146 ACBD3Q9H3P7 528 aa18.93■□□□□ 0.62
GTF3C4-201ENST00000372146 DCTN1Q14203 1278 aa18.93■□□□□ 0.62
GTF3C4-201ENST00000372146 RGL3Q3MIN7 710 aa18.93■□□□□ 0.62
GTF3C4-201ENST00000372146 TPM2P07951 284 aa18.92■□□□□ 0.62
GTF3C4-201ENST00000372146 RWDD1Q9H446 243 aaPredicted RBP18.92■□□□□ 0.62
GTF3C4-201ENST00000372146 FOXD4L6Q3SYB3 417 aaPredicted RBP18.92■□□□□ 0.62
GTF3C4-201ENST00000372146 FOXD4L3Q6VB84 417 aaPredicted RBP18.92■□□□□ 0.62
GTF3C4-201ENST00000372146 MTUS2Q5JR59 1369 aa18.92■□□□□ 0.62
GTF3C4-201ENST00000372146 GPATCH3Q96I76 525 aa18.91■□□□□ 0.62
GTF3C4-201ENST00000372146 SF3A1Q15459 793 aaKnown RBP18.91■□□□□ 0.62
GTF3C4-201ENST00000372146 CDR1P51861 262 aa18.9■□□□□ 0.62
GTF3C4-201ENST00000372146 RCAN3Q9UKA8 241 aa18.9■□□□□ 0.62
GTF3C4-201ENST00000372146 TSPY4P0CV99 314 aa18.89■□□□□ 0.61
GTF3C4-201ENST00000372146 TSPY10P0CW01 314 aa18.89■□□□□ 0.61
GTF3C4-201ENST00000372146 H3BQV1 296 aa18.89■□□□□ 0.61
GTF3C4-201ENST00000372146 IFFO2Q5TF58 517 aa18.89■□□□□ 0.61
GTF3C4-201ENST00000372146 DYDC1Q8WWB3 177 aa18.88■□□□□ 0.61
GTF3C4-201ENST00000372146 WWC1Q8IX03 1113 aa18.87■□□□□ 0.61
GTF3C4-201ENST00000372146 LEKR1Q6ZMV7 388 aa18.87■□□□□ 0.61
GTF3C4-201ENST00000372146 IPO8O15397 1037 aaKnown RBP18.87■□□□□ 0.61
GTF3C4-201ENST00000372146 IFT57Q9NWB7 429 aa18.87■□□□□ 0.61
GTF3C4-201ENST00000372146 PMFBP1Q8TBY8 1022 aa18.87■□□□□ 0.61
GTF3C4-201ENST00000372146 IPO7O95373 1038 aaKnown RBP18.86■□□□□ 0.61
GTF3C4-201ENST00000372146 KIF3AQ9Y496 699 aa18.85■□□□□ 0.61
GTF3C4-201ENST00000372146 R3HCC1Q9Y3T6 440 aaKnown RBP18.85■□□□□ 0.61
GTF3C4-201ENST00000372146 MNS1Q8NEH6 495 aa18.84■□□□□ 0.61
GTF3C4-201ENST00000372146 VPS53Q5VIR6 699 aa18.84■□□□□ 0.61
GTF3C4-201ENST00000372146 PCMTD1Q96MG8 357 aaPredicted RBP18.84■□□□□ 0.61
GTF3C4-201ENST00000372146 SLC4A3P48751 1232 aa18.83■□□□□ 0.6
GTF3C4-201ENST00000372146 SKIDA1Q1XH10 827 aa18.82■□□□□ 0.6
GTF3C4-201ENST00000372146 ATP6V1DQ9Y5K8 247 aa18.81■□□□□ 0.6
GTF3C4-201ENST00000372146 TSPYL1Q9H0U9 437 aa18.81■□□□□ 0.6
GTF3C4-201ENST00000372146 MYO15BQ96JP2 1530 aa18.79■□□□□ 0.6
GTF3C4-201ENST00000372146 DIAPH3Q9NSV4 1193 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms