RNA–Protein interactions for RNA: ENST00000371941.3

PREX1-201, Transcript of phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PREX1, Length 6,636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREX1-201ENST00000371941 NUP155O75694 1391 aa17.5■□□□□ 0.39
PREX1-201ENST00000371941 PLIN1O60240 522 aa17.49■□□□□ 0.39
PREX1-201ENST00000371941 SRPK2P78362 688 aaKnown RBP17.49■□□□□ 0.39
PREX1-201ENST00000371941 CDCA8Q53HL2 280 aa17.48■□□□□ 0.39
PREX1-201ENST00000371941 SMARCA2P51531 1590 aa17.47■□□□□ 0.39
PREX1-201ENST00000371941 RCAN3Q9UKA8 241 aa17.47■□□□□ 0.39
PREX1-201ENST00000371941 MORC1Q86VD1 984 aa17.46■□□□□ 0.39
PREX1-201ENST00000371941 TRIM44Q96DX7 344 aaPredicted RBP17.44■□□□□ 0.38
PREX1-201ENST00000371941 KTN1Q86UP2 1357 aaKnown RBP17.42■□□□□ 0.38
PREX1-201ENST00000371941 SLC4A3P48751 1232 aa17.42■□□□□ 0.38
PREX1-201ENST00000371941 SLKQ9H2G2 1235 aaPredicted RBP17.42■□□□□ 0.38
PREX1-201ENST00000371941 GZF1Q9H116 711 aaPredicted RBP17.41■□□□□ 0.38
PREX1-201ENST00000371941 CLUAP1Q96AJ1 413 aa17.41■□□□□ 0.38
PREX1-201ENST00000371941 HSP90AB1P08238 724 aaKnown RBP17.4■□□□□ 0.38
PREX1-201ENST00000371941 RRP7AQ9Y3A4 280 aaKnown RBP17.4■□□□□ 0.38
PREX1-201ENST00000371941 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.4■□□□□ 0.38
PREX1-201ENST00000371941 ATAD2BQ9ULI0 1458 aa17.4■□□□□ 0.38
PREX1-201ENST00000371941 PLCB2Q00722 1185 aa17.4■□□□□ 0.38
PREX1-201ENST00000371941 NAP1L5Q96NT1 182 aaPredicted RBP17.38■□□□□ 0.37
PREX1-201ENST00000371941 NUDCQ9Y266 331 aa17.38■□□□□ 0.37
PREX1-201ENST00000371941 ST20-MTHFSA0A0A6YYL1 179 aa17.38■□□□□ 0.37
PREX1-201ENST00000371941 TIMELESSQ9UNS1 1208 aa17.38■□□□□ 0.37
PREX1-201ENST00000371941 FMN1Q68DA7 1419 aa17.37■□□□□ 0.37
PREX1-201ENST00000371941 ZNF644Q9H582 1327 aaPredicted RBP17.35■□□□□ 0.37
PREX1-201ENST00000371941 U2AF1L5P0DN76 240 aaPredicted RBP17.35■□□□□ 0.37
PREX1-201ENST00000371941 U2AF1Q01081 240 aaKnown RBP eCLIP17.35■□□□□ 0.37
PREX1-201ENST00000371941 BCL2L13Q9BXK5 485 aa17.34■□□□□ 0.37
PREX1-201ENST00000371941 FOXD4L1Q9NU39 408 aa17.34■□□□□ 0.37
PREX1-201ENST00000371941 NUTM2FA1L443 756 aa17.33■□□□□ 0.37
PREX1-201ENST00000371941 PTMAP06454 111 aaKnown RBP17.33■□□□□ 0.36
PREX1-201ENST00000371941 RAD54L2Q9Y4B4 1467 aa17.32■□□□□ 0.36
PREX1-201ENST00000371941 EXOC6Q8TAG9 804 aa17.32■□□□□ 0.36
PREX1-201ENST00000371941 ITPRIPQ8IWB1 547 aa17.31■□□□□ 0.36
PREX1-201ENST00000371941 GOLGA6L22H0YM25 854 aa17.31■□□□□ 0.36
PREX1-201ENST00000371941 KIF3BO15066 747 aa17.31■□□□□ 0.36
PREX1-201ENST00000371941 PANK3Q9H999 370 aa17.3■□□□□ 0.36
PREX1-201ENST00000371941 CCDC18Q5T9S5 1454 aa17.29■□□□□ 0.36
PREX1-201ENST00000371941 DNTTIP2Q5QJE6 756 aaKnown RBP17.29■□□□□ 0.36
PREX1-201ENST00000371941 KIF21BO75037 1637 aa17.29■□□□□ 0.36
PREX1-201ENST00000371941 HAP1P54257 671 aaPredicted RBP17.29■□□□□ 0.36
PREX1-201ENST00000371941 TRAK1Q9UPV9 953 aa17.29■□□□□ 0.36
PREX1-201ENST00000371941 CADPSQ9ULU8 1353 aa17.29■□□□□ 0.36
PREX1-201ENST00000371941 OS9Q13438 667 aaPredicted RBP17.29■□□□□ 0.36
PREX1-201ENST00000371941 CASC1Q6TDU7 716 aa17.28■□□□□ 0.36
PREX1-201ENST00000371941 KANK1Q14678 1352 aa17.28■□□□□ 0.36
PREX1-201ENST00000371941 NAP1L2Q9ULW6 460 aaPredicted RBP17.28■□□□□ 0.36
PREX1-201ENST00000371941 ANKRD30AQ9BXX3 1397 aa17.28■□□□□ 0.36
PREX1-201ENST00000371941 MFAP1P55081 439 aaKnown RBP17.27■□□□□ 0.36
PREX1-201ENST00000371941 ARID3AQ99856 593 aa17.27■□□□□ 0.36
PREX1-201ENST00000371941 PHLDB1Q86UU1 1377 aa17.27■□□□□ 0.36
PREX1-201ENST00000371941 PRKRIP1Q9H875 184 aaPredicted RBP17.27■□□□□ 0.36
PREX1-201ENST00000371941 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.25■□□□□ 0.35
PREX1-201ENST00000371941 RALBP1Q15311 655 aa17.25■□□□□ 0.35
PREX1-201ENST00000371941 HSCBQ8IWL3 235 aa17.24■□□□□ 0.35
PREX1-201ENST00000371941 TULP1O00294 542 aaPredicted RBP17.24■□□□□ 0.35
PREX1-201ENST00000371941 CRBNQ96SW2 442 aa17.24■□□□□ 0.35
PREX1-201ENST00000371941 PRDM2Q13029 1718 aa17.24■□□□□ 0.35
PREX1-201ENST00000371941 GLIPR1L2Q4G1C9 344 aa17.23■□□□□ 0.35
PREX1-201ENST00000371941 PAK3O75914 559 aaPredicted RBP17.23■□□□□ 0.35
PREX1-201ENST00000371941 FANCD2Q9BXW9 1451 aa17.22■□□□□ 0.35
PREX1-201ENST00000371941 IPO9Q96P70 1041 aaKnown RBP17.22■□□□□ 0.35
PREX1-201ENST00000371941 PDS5BQ9NTI5 1447 aa17.22■□□□□ 0.35
PREX1-201ENST00000371941 ELL2O00472 640 aaPredicted RBP17.21■□□□□ 0.35
PREX1-201ENST00000371941 JPH4Q96JJ6 628 aa17.21■□□□□ 0.35
PREX1-201ENST00000371941 SYNJ1O43426 1573 aa17.21■□□□□ 0.35
PREX1-201ENST00000371941 NOL8Q76FK4 1167 aaKnown RBP17.21■□□□□ 0.35
PREX1-201ENST00000371941 FGD5Q6ZNL6 1462 aa17.21■□□□□ 0.35
PREX1-201ENST00000371941 CARMIL2Q6F5E8 1435 aa17.2■□□□□ 0.34
PREX1-201ENST00000371941 GOLGA2Q08379 1002 aa17.2■□□□□ 0.34
PREX1-201ENST00000371941 SMC4Q9NTJ3 1288 aa17.2■□□□□ 0.34
PREX1-201ENST00000371941 USP47Q96K76 1375 aa17.19■□□□□ 0.34
PREX1-201ENST00000371941 IGF1RP08069 1367 aa17.19■□□□□ 0.34
PREX1-201ENST00000371941 KCNJ4P48050 445 aa17.18■□□□□ 0.34
PREX1-201ENST00000371941 FOXD4L5Q5VV16 416 aaPredicted RBP17.18■□□□□ 0.34
PREX1-201ENST00000371941 FOXD4L4Q8WXT5 416 aaPredicted RBP17.18■□□□□ 0.34
PREX1-201ENST00000371941 TCERG1O14776 1098 aaKnown RBP17.17■□□□□ 0.34
PREX1-201ENST00000371941 NLRP13Q86W25 1043 aa17.16■□□□□ 0.34
PREX1-201ENST00000371941 AMER1Q5JTC6 1135 aaPredicted RBP17.16■□□□□ 0.34
PREX1-201ENST00000371941 ARAP1Q96P48 1450 aa17.15■□□□□ 0.34
PREX1-201ENST00000371941 TRHP20396 242 aaPredicted RBP17.15■□□□□ 0.34
PREX1-201ENST00000371941 MYBBP1AQ9BQG0 1328 aaKnown RBP17.14■□□□□ 0.33
PREX1-201ENST00000371941 ERICH6BQ5W0A0 696 aa17.14■□□□□ 0.33
PREX1-201ENST00000371941 WASHC2AQ641Q2 1341 aa17.14■□□□□ 0.33
PREX1-201ENST00000371941 SLC4A10Q6U841 1118 aa17.14■□□□□ 0.33
PREX1-201ENST00000371941 CCDC184Q52MB2 194 aa17.14■□□□□ 0.33
PREX1-201ENST00000371941 EFCAB2Q5VUJ9 269 aa17.14■□□□□ 0.33
PREX1-201ENST00000371941 RRP1P56182 461 aaKnown RBP17.13■□□□□ 0.33
PREX1-201ENST00000371941 KIF15Q9NS87 1388 aa17.13■□□□□ 0.33
PREX1-201ENST00000371941 LTV1Q96GA3 475 aaPredicted RBP17.13■□□□□ 0.33
PREX1-201ENST00000371941 PDE4AP27815 886 aa17.13■□□□□ 0.33
PREX1-201ENST00000371941 FGD1P98174 961 aa17.13■□□□□ 0.33
PREX1-201ENST00000371941 HDGFL2Q7Z4V5 671 aaPredicted RBP17.13■□□□□ 0.33
PREX1-201ENST00000371941 KIF7Q2M1P5 1343 aa17.12■□□□□ 0.33
PREX1-201ENST00000371941 COG6Q9Y2V7 657 aa17.12■□□□□ 0.33
PREX1-201ENST00000371941 SPAG9O60271 1321 aaKnown RBP17.12■□□□□ 0.33
PREX1-201ENST00000371941 APAF1O14727 1248 aa17.11■□□□□ 0.33
PREX1-201ENST00000371941 RTF1Q92541 710 aaKnown RBP17.11■□□□□ 0.33
PREX1-201ENST00000371941 CENPJQ9HC77 1338 aaPredicted RBP17.11■□□□□ 0.33
PREX1-201ENST00000371941 ZNF330Q9Y3S2 320 aaPredicted RBP17.1■□□□□ 0.33
PREX1-201ENST00000371941 LRRC9Q6ZRR7 1453 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms