RNA–Protein interactions for RNA: ENST00000371539.7

SALL4-202, Transcript of spalt like transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene SALL4, Length 1,151 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4-202ENST00000371539 CHIC1Q5VXU3 224 aa17.43■□□□□ 0.38
SALL4-202ENST00000371539 EHMT2Q96KQ7 1210 aa17.42■□□□□ 0.38
SALL4-202ENST00000371539 KIF14Q15058 1648 aa17.41■□□□□ 0.38
SALL4-202ENST00000371539 TROQ12816 1431 aaPredicted RBP17.39■□□□□ 0.38
SALL4-202ENST00000371539 MYO5CQ9NQX4 1742 aa17.38■□□□□ 0.37
SALL4-202ENST00000371539 EFCAB2Q5VUJ9 269 aa17.38■□□□□ 0.37
SALL4-202ENST00000371539 FBXO41Q8TF61 875 aa17.38■□□□□ 0.37
SALL4-202ENST00000371539 ATP1B4Q9UN42 357 aaPredicted RBP17.37■□□□□ 0.37
SALL4-202ENST00000371539 ATP10AO60312 1499 aa17.37■□□□□ 0.37
SALL4-202ENST00000371539 LRRIQ1Q96JM4 1722 aa17.36■□□□□ 0.37
SALL4-202ENST00000371539 CDK11AQ9UQ88 783 aaPredicted RBP17.36■□□□□ 0.37
SALL4-202ENST00000371539 ARHGEF12Q9NZN5 1544 aa17.36■□□□□ 0.37
SALL4-202ENST00000371539 C9orf84Q5VXU9 1444 aa17.35■□□□□ 0.37
SALL4-202ENST00000371539 KDM5CP41229 1560 aa17.34■□□□□ 0.37
SALL4-202ENST00000371539 HSPA2P54652 639 aa17.34■□□□□ 0.37
SALL4-202ENST00000371539 MLECQ14165 292 aa17.34■□□□□ 0.37
SALL4-202ENST00000371539 FER1L4A9Z1Z3 1794 aa17.33■□□□□ 0.37
SALL4-202ENST00000371539 ZNF518AQ6AHZ1 1483 aa17.33■□□□□ 0.37
SALL4-202ENST00000371539 ARHGAP5Q13017 1502 aa17.32■□□□□ 0.36
SALL4-202ENST00000371539 CLIP1P30622 1438 aa17.31■□□□□ 0.36
SALL4-202ENST00000371539 PLPPR3Q6T4P5 718 aa17.3■□□□□ 0.36
SALL4-202ENST00000371539 AFAP1Q8N556 730 aa17.3■□□□□ 0.36
SALL4-202ENST00000371539 CASKIN1Q8WXD9 1431 aa17.3■□□□□ 0.36
SALL4-202ENST00000371539 DIP2CQ9Y2E4 1556 aa17.28■□□□□ 0.36
SALL4-202ENST00000371539 CDC42BPBQ9Y5S2 1711 aa17.28■□□□□ 0.36
SALL4-202ENST00000371539 REREQ9P2R6 1566 aa17.27■□□□□ 0.35
SALL4-202ENST00000371539 CCDC18Q5T9S5 1454 aa17.26■□□□□ 0.35
SALL4-202ENST00000371539 MLH3Q9UHC1 1453 aa17.26■□□□□ 0.35
SALL4-202ENST00000371539 PREX2Q70Z35 1606 aa17.26■□□□□ 0.35
SALL4-202ENST00000371539 ABCC1P33527 1531 aa17.26■□□□□ 0.35
SALL4-202ENST00000371539 TRAPPC8Q9Y2L5 1435 aa17.25■□□□□ 0.35
SALL4-202ENST00000371539 ABCA6Q8N139 1617 aa17.25■□□□□ 0.35
SALL4-202ENST00000371539 CEBPAP49715 358 aaPredicted RBP17.23■□□□□ 0.35
SALL4-202ENST00000371539 PREX1Q8TCU6 1659 aa17.22■□□□□ 0.35
SALL4-202ENST00000371539 AGLP35573 1532 aa17.21■□□□□ 0.35
SALL4-202ENST00000371539 ITSN2Q9NZM3 1697 aa17.21■□□□□ 0.35
SALL4-202ENST00000371539 FYCO1Q9BQS8 1478 aa17.21■□□□□ 0.35
SALL4-202ENST00000371539 CDC42BPAQ5VT25 1732 aa17.18■□□□□ 0.34
SALL4-202ENST00000371539 KIDINS220Q9ULH0 1771 aa17.17■□□□□ 0.34
SALL4-202ENST00000371539 CERKQ8TCT0 537 aa17.16■□□□□ 0.34
SALL4-202ENST00000371539 UHRF1BP1Q6BDS2 1440 aa17.15■□□□□ 0.34
SALL4-202ENST00000371539 MYT1LQ9UL68 1186 aa17.15■□□□□ 0.34
SALL4-202ENST00000371539 GPATCH8Q9UKJ3 1502 aaKnown RBP17.15■□□□□ 0.34
SALL4-202ENST00000371539 STRCQ7RTU9 1775 aa17.15■□□□□ 0.34
SALL4-202ENST00000371539 SAMD9LQ8IVG5 1584 aa17.15■□□□□ 0.34
SALL4-202ENST00000371539 C3P01024 1663 aa17.14■□□□□ 0.33
SALL4-202ENST00000371539 SETD1BQ9UPS6 1966 aaKnown RBP17.13■□□□□ 0.33
SALL4-202ENST00000371539 SYCP2Q9BX26 1530 aa17.12■□□□□ 0.33
SALL4-202ENST00000371539 CNTLNQ9NXG0 1405 aa17.09■□□□□ 0.33
SALL4-202ENST00000371539 KIAA1107Q9UPP5 1409 aa17.09■□□□□ 0.33
SALL4-202ENST00000371539 ZNF777Q9ULD5 760 aaPredicted RBP17.08■□□□□ 0.32
SALL4-202ENST00000371539 HNRNPMP52272 730 aaKnown RBP eCLIP17.07■□□□□ 0.32
SALL4-202ENST00000371539 PLXNC1O60486 1568 aa17.06■□□□□ 0.32
SALL4-202ENST00000371539 SPAG9O60271 1321 aaKnown RBP17.06■□□□□ 0.32
SALL4-202ENST00000371539 DMRT2Q9Y5R5 561 aa17.06■□□□□ 0.32
SALL4-202ENST00000371539 INO80Q9ULG1 1556 aaPredicted RBP17.06■□□□□ 0.32
SALL4-202ENST00000371539 ATP7AQ04656 1500 aa17.06■□□□□ 0.32
SALL4-202ENST00000371539 PTPRTO14522 1441 aa17.05■□□□□ 0.32
SALL4-202ENST00000371539 PLEKHH2Q8IVE3 1493 aa17.05■□□□□ 0.32
SALL4-202ENST00000371539 ESF1Q9H501 851 aaKnown RBP17.04■□□□□ 0.32
SALL4-202ENST00000371539 NPATQ14207 1427 aa17.04■□□□□ 0.32
SALL4-202ENST00000371539 MROH2AA6NES4 1674 aa17.04■□□□□ 0.32
SALL4-202ENST00000371539 CFDP1Q9UEE9 299 aaPredicted RBP17.03■□□□□ 0.32
SALL4-202ENST00000371539 NCOA1Q15788 1441 aa17.03■□□□□ 0.32
SALL4-202ENST00000371539 CCNB3Q8WWL7 1395 aa17.02■□□□□ 0.32
SALL4-202ENST00000371539 ZMYM3Q14202 1370 aa17.02■□□□□ 0.31
SALL4-202ENST00000371539 MTUS2Q5JR59 1369 aa17.02■□□□□ 0.31
SALL4-202ENST00000371539 A2MP01023 1474 aa17.01■□□□□ 0.31
SALL4-202ENST00000371539 SUPT6HQ7KZ85 1726 aaKnown RBP17.01■□□□□ 0.31
SALL4-202ENST00000371539 TIAM1Q13009 1591 aa17■□□□□ 0.31
SALL4-202ENST00000371539 LTBP4Q8N2S1 1624 aa16.99■□□□□ 0.31
SALL4-202ENST00000371539 MBD5Q9P267 1494 aa16.99■□□□□ 0.31
SALL4-202ENST00000371539 ZNF644Q9H582 1327 aaPredicted RBP16.98■□□□□ 0.31
SALL4-202ENST00000371539 EHBP1L1Q8N3D4 1523 aa16.98■□□□□ 0.31
SALL4-202ENST00000371539 CLTCQ00610 1675 aaKnown RBP16.97■□□□□ 0.31
SALL4-202ENST00000371539 PTPRKQ15262 1439 aa16.96■□□□□ 0.31
SALL4-202ENST00000371539 CEP162Q5TB80 1403 aa16.96■□□□□ 0.31
SALL4-202ENST00000371539 CAMSAP1Q5T5Y3 1602 aa16.96■□□□□ 0.31
SALL4-202ENST00000371539 ADGBQ8N7X0 1667 aa16.94■□□□□ 0.3
SALL4-202ENST00000371539 MYO3AQ8NEV4 1616 aa16.93■□□□□ 0.3
SALL4-202ENST00000371539 ZNF142P52746 1687 aaPredicted RBP16.93■□□□□ 0.3
SALL4-202ENST00000371539 RTEL1-TNFRSF6BF6WH68 1400 aa16.93■□□□□ 0.3
SALL4-202ENST00000371539 GGT6Q6P531 493 aa16.92■□□□□ 0.3
SALL4-202ENST00000371539 PLA2R1Q13018 1463 aa16.92■□□□□ 0.3
SALL4-202ENST00000371539 IQSEC2Q5JU85 1478 aa16.92■□□□□ 0.3
SALL4-202ENST00000371539 CEP170BQ9Y4F5 1589 aaPredicted RBP16.91■□□□□ 0.3
SALL4-202ENST00000371539 PPP6R1Q9UPN7 881 aa16.91■□□□□ 0.3
SALL4-202ENST00000371539 TCOF1Q13428 1488 aaKnown RBP16.9■□□□□ 0.3
SALL4-202ENST00000371539 NCKAP5LQ9HCH0 1330 aa16.9■□□□□ 0.3
SALL4-202ENST00000371539 DHX29Q7Z478 1369 aaKnown RBP16.89■□□□□ 0.29
SALL4-202ENST00000371539 NCOA2Q15596 1464 aa16.88■□□□□ 0.29
SALL4-202ENST00000371539 CAMSAP2Q08AD1 1489 aa16.86■□□□□ 0.29
SALL4-202ENST00000371539 CCDC141Q6ZP82 1450 aa16.86■□□□□ 0.29
SALL4-202ENST00000371539 PKD2Q13563 968 aa16.85■□□□□ 0.29
SALL4-202ENST00000371539 ZNF335Q9H4Z2 1342 aaPredicted RBP16.85■□□□□ 0.29
SALL4-202ENST00000371539 A2ML1A8K2U0 1454 aa16.84■□□□□ 0.29
SALL4-202ENST00000371539 DNMT1P26358 1616 aaKnown RBP16.82■□□□□ 0.28
SALL4-202ENST00000371539 FAM135AQ9P2D6 1515 aa16.82■□□□□ 0.28
SALL4-202ENST00000371539 ARHGEF5Q12774 1597 aa16.81■□□□□ 0.28
SALL4-202ENST00000371539 KDM5DQ9BY66 1539 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms