RNA–Protein interactions for RNA: ENST00000370096.7

COL11A1-203, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene COL11A1, Length 7,286 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-203ENST00000370096 FOXD4L4Q8WXT5 416 aaPredicted RBP14.03□□□□□ -0.16
COL11A1-203ENST00000370096 MFAP1P55081 439 aaKnown RBP14.02□□□□□ -0.16
COL11A1-203ENST00000370096 TPM4P67936 248 aa14.02□□□□□ -0.16
COL11A1-203ENST00000370096 HSP90AA2PQ14568 343 aaPredicted RBP14.02□□□□□ -0.17
COL11A1-203ENST00000370096 VSIG10Q8N0Z9 540 aa14□□□□□ -0.17
COL11A1-203ENST00000370096 PTMSP20962 102 aa13.99□□□□□ -0.17
COL11A1-203ENST00000370096 SYAP1Q96A49 352 aaPredicted RBP13.99□□□□□ -0.17
COL11A1-203ENST00000370096 SETQ01105 290 aaPredicted RBP13.99□□□□□ -0.17
COL11A1-203ENST00000370096 ITPRIPQ8IWB1 547 aa13.99□□□□□ -0.17
COL11A1-203ENST00000370096 CHMP7Q8WUX9 453 aaPredicted RBP13.99□□□□□ -0.17
COL11A1-203ENST00000370096 ZNF330Q9Y3S2 320 aaPredicted RBP13.99□□□□□ -0.17
COL11A1-203ENST00000370096 SAFB2Q14151 953 aaKnown RBP eCLIP13.98□□□□□ -0.17
COL11A1-203ENST00000370096 CLIP1P30622 1438 aa13.97□□□□□ -0.17
COL11A1-203ENST00000370096 CCAR2Q8N163 923 aaKnown RBP13.96□□□□□ -0.17
COL11A1-203ENST00000370096 ZCCHC6Q5VYS8 1495 aaKnown RBP13.96□□□□□ -0.18
COL11A1-203ENST00000370096 RASSF8Q8NHQ8 419 aa13.96□□□□□ -0.18
COL11A1-203ENST00000370096 TRIM6-TRIM34B2RNG4 842 aa13.95□□□□□ -0.18
COL11A1-203ENST00000370096 CALD1Q05682 793 aaKnown RBP13.95□□□□□ -0.18
COL11A1-203ENST00000370096 RTF1Q92541 710 aaKnown RBP13.95□□□□□ -0.18
COL11A1-203ENST00000370096 WWC1Q8IX03 1113 aa13.94□□□□□ -0.18
COL11A1-203ENST00000370096 HTATSF1O43719 755 aaKnown RBP13.94□□□□□ -0.18
COL11A1-203ENST00000370096 PES1O00541 588 aaKnown RBP13.94□□□□□ -0.18
COL11A1-203ENST00000370096 MORC1Q86VD1 984 aa13.94□□□□□ -0.18
COL11A1-203ENST00000370096 ZNF771Q7L3S4 317 aaPredicted RBP13.93□□□□□ -0.18
COL11A1-203ENST00000370096 SRPK2P78362 688 aaKnown RBP13.93□□□□□ -0.18
COL11A1-203ENST00000370096 CHMP3Q9Y3E7 222 aa13.93□□□□□ -0.18
COL11A1-203ENST00000370096 SCRIBQ14160 1630 aa13.93□□□□□ -0.18
COL11A1-203ENST00000370096 FOXD4L6Q3SYB3 417 aaPredicted RBP13.92□□□□□ -0.18
COL11A1-203ENST00000370096 FOXD4L3Q6VB84 417 aaPredicted RBP13.92□□□□□ -0.18
COL11A1-203ENST00000370096 TIMELESSQ9UNS1 1208 aa13.92□□□□□ -0.18
COL11A1-203ENST00000370096 CFAP44Q96MT7 982 aa13.92□□□□□ -0.18
COL11A1-203ENST00000370096 CALRP27797 417 aaKnown RBP13.91□□□□□ -0.18
COL11A1-203ENST00000370096 TMF1P82094 1093 aa13.91□□□□□ -0.18
COL11A1-203ENST00000370096 DCAF11Q8TEB1 546 aa13.91□□□□□ -0.18
COL11A1-203ENST00000370096 TPM3P06753 285 aa13.91□□□□□ -0.18
COL11A1-203ENST00000370096 PLEKHD1A6NEE1 506 aa13.9□□□□□ -0.18
COL11A1-203ENST00000370096 CEP89Q96ST8 783 aa13.9□□□□□ -0.18
COL11A1-203ENST00000370096 IPO9Q96P70 1041 aaKnown RBP13.89□□□□□ -0.19
COL11A1-203ENST00000370096 CFDP1Q9UEE9 299 aaPredicted RBP13.89□□□□□ -0.19
COL11A1-203ENST00000370096 RCAN3Q9UKA8 241 aa13.89□□□□□ -0.19
COL11A1-203ENST00000370096 ZNF592Q92610 1267 aa13.89□□□□□ -0.19
COL11A1-203ENST00000370096 VPS53Q5VIR6 699 aa13.89□□□□□ -0.19
COL11A1-203ENST00000370096 RWDD1Q9H446 243 aaPredicted RBP13.89□□□□□ -0.19
COL11A1-203ENST00000370096 GORABQ5T7V8 394 aa13.88□□□□□ -0.19
COL11A1-203ENST00000370096 BCL11BQ9C0K0 894 aaPredicted RBP13.88□□□□□ -0.19
COL11A1-203ENST00000370096 TSHZ2Q9NRE2 1034 aa13.88□□□□□ -0.19
COL11A1-203ENST00000370096 SLC4A3P48751 1232 aa13.87□□□□□ -0.19
COL11A1-203ENST00000370096 RSF1Q96T23 1441 aaPredicted RBP13.87□□□□□ -0.19
COL11A1-203ENST00000370096 IPO8O15397 1037 aaKnown RBP13.87□□□□□ -0.19
COL11A1-203ENST00000370096 CCDC180Q9P1Z9 1646 aa13.87□□□□□ -0.19
COL11A1-203ENST00000370096 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.86□□□□□ -0.19
COL11A1-203ENST00000370096 STK26Q9P289 416 aa13.86□□□□□ -0.19
COL11A1-203ENST00000370096 TPD52L1Q16890 204 aaPredicted RBP13.86□□□□□ -0.19
COL11A1-203ENST00000370096 TCERG1O14776 1098 aaKnown RBP13.85□□□□□ -0.19
COL11A1-203ENST00000370096 CSPP1Q1MSJ5 1256 aa13.85□□□□□ -0.19
COL11A1-203ENST00000370096 TAF7LQ5H9L4 462 aa13.85□□□□□ -0.19
COL11A1-203ENST00000370096 MYO15BQ96JP2 1530 aa13.85□□□□□ -0.19
COL11A1-203ENST00000370096 CCDC9Q9Y3X0 531 aaKnown RBP13.85□□□□□ -0.19
COL11A1-203ENST00000370096 PAK3O75914 559 aaPredicted RBP13.84□□□□□ -0.19
COL11A1-203ENST00000370096 SLC4A10Q6U841 1118 aa13.84□□□□□ -0.19
COL11A1-203ENST00000370096 RSPH6AQ9H0K4 717 aa13.84□□□□□ -0.19
COL11A1-203ENST00000370096 TOMM22Q9NS69 142 aa13.84□□□□□ -0.19
COL11A1-203ENST00000370096 SF3A1Q15459 793 aaKnown RBP13.83□□□□□ -0.19
COL11A1-203ENST00000370096 PHF14O94880 888 aa13.83□□□□□ -0.2
COL11A1-203ENST00000370096 CLUAP1Q96AJ1 413 aa13.83□□□□□ -0.2
COL11A1-203ENST00000370096 USP35Q9P2H5 1018 aa13.83□□□□□ -0.2
COL11A1-203ENST00000370096 MARCH6O60337 910 aa13.82□□□□□ -0.2
COL11A1-203ENST00000370096 CEP162Q5TB80 1403 aa13.82□□□□□ -0.2
COL11A1-203ENST00000370096 PMFBP1Q8TBY8 1022 aa13.82□□□□□ -0.2
COL11A1-203ENST00000370096 GPATCH3Q96I76 525 aa13.82□□□□□ -0.2
COL11A1-203ENST00000370096 U2AF1L5P0DN76 240 aaPredicted RBP13.82□□□□□ -0.2
COL11A1-203ENST00000370096 U2AF1Q01081 240 aaKnown RBP eCLIP13.82□□□□□ -0.2
COL11A1-203ENST00000370096 HSPA5P11021 654 aaKnown RBP13.81□□□□□ -0.2
COL11A1-203ENST00000370096 CCDC34Q96HJ3 373 aa13.81□□□□□ -0.2
COL11A1-203ENST00000370096 CCDC146Q8IYE0 955 aa13.81□□□□□ -0.2
COL11A1-203ENST00000370096 MLECQ14165 292 aa13.81□□□□□ -0.2
COL11A1-203ENST00000370096 TRHP20396 242 aaPredicted RBP13.81□□□□□ -0.2
COL11A1-203ENST00000370096 SMC4Q9NTJ3 1288 aa13.8□□□□□ -0.2
COL11A1-203ENST00000370096 FAM13BQ9NYF5 915 aa13.8□□□□□ -0.2
COL11A1-203ENST00000370096 KIF16BQ96L93 1317 aa13.8□□□□□ -0.2
COL11A1-203ENST00000370096 H3BQV1 296 aa13.79□□□□□ -0.2
COL11A1-203ENST00000370096 IFFO2Q5TF58 517 aa13.79□□□□□ -0.2
COL11A1-203ENST00000370096 KTN1Q86UP2 1357 aaKnown RBP13.79□□□□□ -0.2
COL11A1-203ENST00000370096 GOLGA6L19H0YKK7 550 aa13.79□□□□□ -0.2
COL11A1-203ENST00000370096 TSR1Q2NL82 804 aaKnown RBP13.79□□□□□ -0.2
COL11A1-203ENST00000370096 CSB-PGBD3P0DP91 1061 aa13.78□□□□□ -0.2
COL11A1-203ENST00000370096 DDX49Q9Y6V7 483 aaKnown RBP13.77□□□□□ -0.2
COL11A1-203ENST00000370096 FOXD1Q16676 465 aa13.77□□□□□ -0.2
COL11A1-203ENST00000370096 ST18O60284 1047 aa13.77□□□□□ -0.21
COL11A1-203ENST00000370096 CCER2I3L3R5 266 aa13.76□□□□□ -0.21
COL11A1-203ENST00000370096 G3V3G9 751 aa13.76□□□□□ -0.21
COL11A1-203ENST00000370096 DCAF8Q5TAQ9 597 aa13.76□□□□□ -0.21
COL11A1-203ENST00000370096 FBXW7Q969H0 707 aa13.76□□□□□ -0.21
COL11A1-203ENST00000370096 RILPL2Q969X0 211 aa13.76□□□□□ -0.21
COL11A1-203ENST00000370096 DDX11L8A8MPP1 907 aa13.76□□□□□ -0.21
COL11A1-203ENST00000370096 GPS2Q13227 327 aa13.76□□□□□ -0.21
COL11A1-203ENST00000370096 PCMTD1Q96MG8 357 aaPredicted RBP13.76□□□□□ -0.21
COL11A1-203ENST00000370096 BECN2A8MW95 431 aa13.75□□□□□ -0.21
COL11A1-203ENST00000370096 TMX4Q9H1E5 349 aaPredicted RBP13.75□□□□□ -0.21
COL11A1-203ENST00000370096 RRP12Q5JTH9 1297 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms