RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 C14orf37Q86TY3 774 aa7.99□□□□□ -1.13
UBE3D-202ENST00000369746 KIAA0556O60303 1618 aa7.98□□□□□ -1.13
UBE3D-202ENST00000369746 YEATS2Q9ULM3 1422 aa7.98□□□□□ -1.13
UBE3D-202ENST00000369746 ARHGEF12Q9NZN5 1544 aa7.97□□□□□ -1.13
UBE3D-202ENST00000369746 MADDQ8WXG6 1647 aa7.97□□□□□ -1.13
UBE3D-202ENST00000369746 FER1L4A9Z1Z3 1794 aa7.97□□□□□ -1.13
UBE3D-202ENST00000369746 LTBP4Q8N2S1 1624 aa7.96□□□□□ -1.14
UBE3D-202ENST00000369746 DISP1Q96F81 1524 aa7.96□□□□□ -1.14
UBE3D-202ENST00000369746 FAM135AQ9P2D6 1515 aa7.96□□□□□ -1.14
UBE3D-202ENST00000369746 FRMPD1Q5SYB0 1578 aa7.95□□□□□ -1.14
UBE3D-202ENST00000369746 CD109Q6YHK3 1445 aa7.95□□□□□ -1.14
UBE3D-202ENST00000369746 MROH2AA6NES4 1674 aa7.94□□□□□ -1.14
UBE3D-202ENST00000369746 PLCB2Q00722 1185 aa7.94□□□□□ -1.14
UBE3D-202ENST00000369746 DISP3Q9P2K9 1392 aa7.94□□□□□ -1.14
UBE3D-202ENST00000369746 RICTORQ6R327 1708 aa7.93□□□□□ -1.14
UBE3D-202ENST00000369746 AGLP35573 1532 aa7.93□□□□□ -1.14
UBE3D-202ENST00000369746 AKNAQ7Z591 1439 aa7.93□□□□□ -1.14
UBE3D-202ENST00000369746 HAP1P54257 671 aaPredicted RBP7.93□□□□□ -1.14
UBE3D-202ENST00000369746 KIF27Q86VH2 1401 aa7.92□□□□□ -1.14
UBE3D-202ENST00000369746 LOC105371045A0A1W2PR82 267 aa7.92□□□□□ -1.14
UBE3D-202ENST00000369746 PLA2R1Q13018 1463 aa7.91□□□□□ -1.14
UBE3D-202ENST00000369746 RIMS1Q86UR5 1692 aaKnown RBP7.91□□□□□ -1.14
UBE3D-202ENST00000369746 STRCQ7RTU9 1775 aa7.9□□□□□ -1.14
UBE3D-202ENST00000369746 ZNF142P52746 1687 aaPredicted RBP7.9□□□□□ -1.14
UBE3D-202ENST00000369746 SETD1BQ9UPS6 1966 aaKnown RBP7.9□□□□□ -1.14
UBE3D-202ENST00000369746 NPATQ14207 1427 aa7.9□□□□□ -1.15
UBE3D-202ENST00000369746 TRIM26Q12899 539 aaPredicted RBP7.89□□□□□ -1.15
UBE3D-202ENST00000369746 CNTLNQ9NXG0 1405 aa7.88□□□□□ -1.15
UBE3D-202ENST00000369746 CPS1P31327 1500 aa7.88□□□□□ -1.15
UBE3D-202ENST00000369746 IGF1RP08069 1367 aa7.88□□□□□ -1.15
UBE3D-202ENST00000369746 CTTNBP2Q8WZ74 1663 aa7.88□□□□□ -1.15
UBE3D-202ENST00000369746 ZFYVE16Q7Z3T8 1539 aa7.87□□□□□ -1.15
UBE3D-202ENST00000369746 TMEM132AQ24JP5 1023 aa7.86□□□□□ -1.15
UBE3D-202ENST00000369746 ILDR2Q71H61 639 aa7.86□□□□□ -1.15
UBE3D-202ENST00000369746 MED1Q15648 1581 aaPredicted RBP7.85□□□□□ -1.15
UBE3D-202ENST00000369746 DENND4BO75064 1496 aaPredicted RBP7.84□□□□□ -1.15
UBE3D-202ENST00000369746 PDIA4P13667 645 aaKnown RBP7.84□□□□□ -1.15
UBE3D-202ENST00000369746 SUPT5HO00267 1087 aaKnown RBP7.83□□□□□ -1.16
UBE3D-202ENST00000369746 C9orf84Q5VXU9 1444 aa7.83□□□□□ -1.16
UBE3D-202ENST00000369746 NCOA1Q15788 1441 aa7.82□□□□□ -1.16
UBE3D-202ENST00000369746 UHRF1BP1Q6BDS2 1440 aa7.82□□□□□ -1.16
UBE3D-202ENST00000369746 SLC4A1APQ9BWU0 796 aaKnown RBP7.81□□□□□ -1.16
UBE3D-202ENST00000369746 SYNMO15061 1565 aa7.81□□□□□ -1.16
UBE3D-202ENST00000369746 KDM5CP41229 1560 aa7.8□□□□□ -1.16
UBE3D-202ENST00000369746 ATP10AO60312 1499 aa7.8□□□□□ -1.16
UBE3D-202ENST00000369746 RAPGEF2Q9Y4G8 1499 aa7.8□□□□□ -1.16
UBE3D-202ENST00000369746 CARMIL1Q5VZK9 1371 aa7.8□□□□□ -1.16
UBE3D-202ENST00000369746 UBTFP17480 764 aaKnown RBP7.78□□□□□ -1.16
UBE3D-202ENST00000369746 PTPRKQ15262 1439 aa7.78□□□□□ -1.16
UBE3D-202ENST00000369746 CHMP4AQ9BY43 222 aa7.78□□□□□ -1.16
UBE3D-202ENST00000369746 SAMD9Q5K651 1589 aa7.77□□□□□ -1.17
UBE3D-202ENST00000369746 TCOF1Q13428 1488 aaKnown RBP7.77□□□□□ -1.17
UBE3D-202ENST00000369746 PKD2Q13563 968 aa7.76□□□□□ -1.17
UBE3D-202ENST00000369746 PPP6R1Q9UPN7 881 aa7.76□□□□□ -1.17
UBE3D-202ENST00000369746 TRAPPC8Q9Y2L5 1435 aa7.76□□□□□ -1.17
UBE3D-202ENST00000369746 SCAF1Q9H7N4 1312 aaKnown RBP7.76□□□□□ -1.17
UBE3D-202ENST00000369746 DEPDC5O75140 1603 aa7.75□□□□□ -1.17
UBE3D-202ENST00000369746 FBXO3Q9UK99 471 aa7.74□□□□□ -1.17
UBE3D-202ENST00000369746 RAPGEF6Q8TEU7 1601 aa7.74□□□□□ -1.17
UBE3D-202ENST00000369746 MLH3Q9UHC1 1453 aa7.74□□□□□ -1.17
UBE3D-202ENST00000369746 DHX37Q8IY37 1157 aaKnown RBP7.73□□□□□ -1.17
UBE3D-202ENST00000369746 UBE2Q2Q8WVN8 375 aa7.73□□□□□ -1.17
UBE3D-202ENST00000369746 C3P01024 1663 aa7.73□□□□□ -1.17
UBE3D-202ENST00000369746 ATP10BO94823 1461 aa7.72□□□□□ -1.17
UBE3D-202ENST00000369746 CDK12Q9NYV4 1490 aaPredicted RBP7.72□□□□□ -1.17
UBE3D-202ENST00000369746 HECW1Q76N89 1606 aa7.72□□□□□ -1.17
UBE3D-202ENST00000369746 KIF14Q15058 1648 aa7.71□□□□□ -1.17
UBE3D-202ENST00000369746 RNF17Q9BXT8 1623 aaKnown RBP7.71□□□□□ -1.17
UBE3D-202ENST00000369746 ZNF518AQ6AHZ1 1483 aa7.7□□□□□ -1.18
UBE3D-202ENST00000369746 PDE4CQ08493 712 aa7.7□□□□□ -1.18
UBE3D-202ENST00000369746 MED14O60244 1454 aa7.7□□□□□ -1.18
UBE3D-202ENST00000369746 POLR1AO95602 1720 aaPredicted RBP7.69□□□□□ -1.18
UBE3D-202ENST00000369746 SAMD1Q6SPF0 538 aaPredicted RBP7.69□□□□□ -1.18
UBE3D-202ENST00000369746 CENPBP07199 599 aaPredicted RBP7.69□□□□□ -1.18
UBE3D-202ENST00000369746 KDM2AQ9Y2K7 1162 aa7.68□□□□□ -1.18
UBE3D-202ENST00000369746 PLCH2O75038 1416 aa7.67□□□□□ -1.18
UBE3D-202ENST00000369746 FOXD1Q16676 465 aa7.67□□□□□ -1.18
UBE3D-202ENST00000369746 LRRC9Q6ZRR7 1453 aa7.67□□□□□ -1.18
UBE3D-202ENST00000369746 SIGLEC1Q9BZZ2 1709 aa7.67□□□□□ -1.18
UBE3D-202ENST00000369746 DIP2CQ9Y2E4 1556 aa7.67□□□□□ -1.18
UBE3D-202ENST00000369746 MYO3AQ8NEV4 1616 aa7.66□□□□□ -1.18
UBE3D-202ENST00000369746 ZBTB22O15209 634 aa7.66□□□□□ -1.18
UBE3D-202ENST00000369746 MYO5CQ9NQX4 1742 aa7.66□□□□□ -1.18
UBE3D-202ENST00000369746 CDK13Q14004 1512 aaKnown RBP7.65□□□□□ -1.19
UBE3D-202ENST00000369746 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.65□□□□□ -1.19
UBE3D-202ENST00000369746 CAMSAP1Q5T5Y3 1602 aa7.64□□□□□ -1.19
UBE3D-202ENST00000369746 A2ML1A8K2U0 1454 aa7.64□□□□□ -1.19
UBE3D-202ENST00000369746 KDM5DQ9BY66 1539 aa7.64□□□□□ -1.19
UBE3D-202ENST00000369746 CEP170BQ9Y4F5 1589 aaPredicted RBP7.64□□□□□ -1.19
UBE3D-202ENST00000369746 PRXQ9BXM0 1461 aa7.63□□□□□ -1.19
UBE3D-202ENST00000369746 KDM5AP29375 1690 aaKnown RBP7.63□□□□□ -1.19
UBE3D-202ENST00000369746 PLXNC1O60486 1568 aa7.62□□□□□ -1.19
UBE3D-202ENST00000369746 VWDEQ8N2E2 1590 aa7.61□□□□□ -1.19
UBE3D-202ENST00000369746 TOM1O60784 492 aa7.61□□□□□ -1.19
UBE3D-202ENST00000369746 ABCC3O15438 1527 aa7.61□□□□□ -1.19
UBE3D-202ENST00000369746 ITSN2Q9NZM3 1697 aa7.6□□□□□ -1.19
UBE3D-202ENST00000369746 IGSF3O75054 1194 aa7.6□□□□□ -1.19
UBE3D-202ENST00000369746 ALKQ9UM73 1620 aa7.59□□□□□ -1.19
UBE3D-202ENST00000369746 CAMSAP2Q08AD1 1489 aa7.59□□□□□ -1.19
UBE3D-202ENST00000369746 SHANK2Q9UPX8 1470 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms