RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 NEFMP07197 916 aa7.17□□□□□ -1.26
SMNDC1-202ENST00000369603 DCAF11Q8TEB1 546 aa7.17□□□□□ -1.26
SMNDC1-202ENST00000369603 SUPT6HQ7KZ85 1726 aaKnown RBP7.17□□□□□ -1.26
SMNDC1-202ENST00000369603 FKBP8Q14318 412 aa7.17□□□□□ -1.26
SMNDC1-202ENST00000369603 HSPA5P11021 654 aaKnown RBP7.16□□□□□ -1.26
SMNDC1-202ENST00000369603 FOXD1Q16676 465 aa7.16□□□□□ -1.26
SMNDC1-202ENST00000369603 GRIN2AQ12879 1464 aa7.16□□□□□ -1.26
SMNDC1-202ENST00000369603 TROQ12816 1431 aaPredicted RBP7.16□□□□□ -1.26
SMNDC1-202ENST00000369603 PRG4Q92954 1404 aaPredicted RBP7.16□□□□□ -1.26
SMNDC1-202ENST00000369603 L3MBTL2Q969R5 705 aa7.15□□□□□ -1.26
SMNDC1-202ENST00000369603 DAXXQ9UER7 740 aaPredicted RBP7.15□□□□□ -1.26
SMNDC1-202ENST00000369603 SPAG9O60271 1321 aaKnown RBP7.15□□□□□ -1.26
SMNDC1-202ENST00000369603 EPRSP07814 1512 aaKnown RBP7.15□□□□□ -1.26
SMNDC1-202ENST00000369603 OSCARQ8IYS5 282 aa7.14□□□□□ -1.27
SMNDC1-202ENST00000369603 HFM1A2PYH4 1435 aa7.14□□□□□ -1.27
SMNDC1-202ENST00000369603 WDR43Q15061 677 aaKnown RBP eCLIP7.14□□□□□ -1.27
SMNDC1-202ENST00000369603 ANP32EQ9BTT0 268 aa7.14□□□□□ -1.27
SMNDC1-202ENST00000369603 THOC2Q8NI27 1593 aaKnown RBP7.13□□□□□ -1.27
SMNDC1-202ENST00000369603 TMF1P82094 1093 aa7.13□□□□□ -1.27
SMNDC1-202ENST00000369603 ZNF608Q9ULD9 1512 aaPredicted RBP7.12□□□□□ -1.27
SMNDC1-202ENST00000369603 ZNF644Q9H582 1327 aaPredicted RBP7.12□□□□□ -1.27
SMNDC1-202ENST00000369603 KNSTRNQ9Y448 316 aa7.12□□□□□ -1.27
SMNDC1-202ENST00000369603 SUPT16HQ9Y5B9 1047 aaKnown RBP7.12□□□□□ -1.27
SMNDC1-202ENST00000369603 CTTNBP2Q8WZ74 1663 aa7.12□□□□□ -1.27
SMNDC1-202ENST00000369603 ANKRD50Q9ULJ7 1429 aa7.11□□□□□ -1.27
SMNDC1-202ENST00000369603 CANXP27824 592 aaKnown RBP7.11□□□□□ -1.27
SMNDC1-202ENST00000369603 KIF15Q9NS87 1388 aa7.11□□□□□ -1.27
SMNDC1-202ENST00000369603 CCDC144AA2RUR9 1427 aa7.1□□□□□ -1.27
SMNDC1-202ENST00000369603 ROCK2O75116 1388 aaKnown RBP7.1□□□□□ -1.27
SMNDC1-202ENST00000369603 KIF3BO15066 747 aa7.1□□□□□ -1.27
SMNDC1-202ENST00000369603 PLEKHH2Q8IVE3 1493 aa7.1□□□□□ -1.27
SMNDC1-202ENST00000369603 ROCK1Q13464 1354 aa7.1□□□□□ -1.27
SMNDC1-202ENST00000369603 CDK13Q14004 1512 aaKnown RBP7.1□□□□□ -1.27
SMNDC1-202ENST00000369603 RTL5Q5HYW3 569 aaPredicted RBP7.09□□□□□ -1.27
SMNDC1-202ENST00000369603 KIF21AQ7Z4S6 1674 aa7.09□□□□□ -1.27
SMNDC1-202ENST00000369603 GGT6Q6P531 493 aa7.09□□□□□ -1.27
SMNDC1-202ENST00000369603 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.09□□□□□ -1.27
SMNDC1-202ENST00000369603 ADAMTS12P58397 1594 aa7.08□□□□□ -1.28
SMNDC1-202ENST00000369603 DAPK1P53355 1430 aa7.08□□□□□ -1.28
SMNDC1-202ENST00000369603 NAIPQ13075 1403 aa7.08□□□□□ -1.28
SMNDC1-202ENST00000369603 ARHGAP5Q13017 1502 aa7.08□□□□□ -1.28
SMNDC1-202ENST00000369603 PTPN23Q9H3S7 1636 aa7.08□□□□□ -1.28
SMNDC1-202ENST00000369603 WDR97A6NE52 1622 aa7.07□□□□□ -1.28
SMNDC1-202ENST00000369603 STAC3Q96MF2 364 aa7.07□□□□□ -1.28
SMNDC1-202ENST00000369603 EIF3AQ14152 1382 aaKnown RBP7.07□□□□□ -1.28
SMNDC1-202ENST00000369603 WDR62O43379 1518 aa7.07□□□□□ -1.28
SMNDC1-202ENST00000369603 ABCA5Q8WWZ7 1642 aa7.07□□□□□ -1.28
SMNDC1-202ENST00000369603 ARID4BQ4LE39 1312 aaPredicted RBP7.07□□□□□ -1.28
SMNDC1-202ENST00000369603 UGGT2Q9NYU1 1516 aa7.07□□□□□ -1.28
SMNDC1-202ENST00000369603 C9orf84Q5VXU9 1444 aa7.06□□□□□ -1.28
SMNDC1-202ENST00000369603 CFAP53Q96M91 514 aa7.06□□□□□ -1.28
SMNDC1-202ENST00000369603 SALL2Q9Y467 1007 aaPredicted RBP7.06□□□□□ -1.28
SMNDC1-202ENST00000369603 HDGFP51858 240 aaKnown RBP7.06□□□□□ -1.28
SMNDC1-202ENST00000369603 PLB1Q6P1J6 1458 aa7.06□□□□□ -1.28
SMNDC1-202ENST00000369603 RALBP1Q15311 655 aa7.06□□□□□ -1.28
SMNDC1-202ENST00000369603 KTN1Q86UP2 1357 aaKnown RBP7.05□□□□□ -1.28
SMNDC1-202ENST00000369603 CCDC136Q96JN2 1154 aa7.05□□□□□ -1.28
SMNDC1-202ENST00000369603 BCL11AQ9H165 835 aa7.05□□□□□ -1.28
SMNDC1-202ENST00000369603 CFAP43Q8NDM7 1665 aa7.05□□□□□ -1.28
SMNDC1-202ENST00000369603 AKNAQ7Z591 1439 aa7.05□□□□□ -1.28
SMNDC1-202ENST00000369603 POGKQ9P215 609 aa7.04□□□□□ -1.28
SMNDC1-202ENST00000369603 KIF14Q15058 1648 aa7.04□□□□□ -1.28
SMNDC1-202ENST00000369603 WASHC2CQ9Y4E1 1318 aa7.04□□□□□ -1.28
SMNDC1-202ENST00000369603 USP47Q96K76 1375 aa7.04□□□□□ -1.28
SMNDC1-202ENST00000369603 KIAA1107Q9UPP5 1409 aa7.04□□□□□ -1.28
SMNDC1-202ENST00000369603 ZBTB47Q9UFB7 747 aaPredicted RBP7.04□□□□□ -1.28
SMNDC1-202ENST00000369603 RAPGEF6Q8TEU7 1601 aa7.03□□□□□ -1.28
SMNDC1-202ENST00000369603 CAMSAP2Q08AD1 1489 aa7.03□□□□□ -1.28
SMNDC1-202ENST00000369603 TSHZ2Q9NRE2 1034 aa7.03□□□□□ -1.28
SMNDC1-202ENST00000369603 PBRM1Q86U86 1689 aa7.03□□□□□ -1.28
SMNDC1-202ENST00000369603 PLPPR3Q6T4P5 718 aa7.03□□□□□ -1.28
SMNDC1-202ENST00000369603 ABCC5O15440 1437 aa7.02□□□□□ -1.28
SMNDC1-202ENST00000369603 CC2D1BQ5T0F9 858 aaKnown RBP7.02□□□□□ -1.29
SMNDC1-202ENST00000369603 EIF4G3O43432 1585 aaKnown RBP7.02□□□□□ -1.29
SMNDC1-202ENST00000369603 KIAA0556O60303 1618 aa7.02□□□□□ -1.29
SMNDC1-202ENST00000369603 CCDC141Q6ZP82 1450 aa7.02□□□□□ -1.29
SMNDC1-202ENST00000369603 ST20-MTHFSA0A0A6YYL1 179 aa7.01□□□□□ -1.29
SMNDC1-202ENST00000369603 ANP32AP39687 249 aaKnown RBP7.01□□□□□ -1.29
SMNDC1-202ENST00000369603 ARHGEF11O15085 1522 aa7.01□□□□□ -1.29
SMNDC1-202ENST00000369603 TARBP1Q13395 1621 aaKnown RBP7.01□□□□□ -1.29
SMNDC1-202ENST00000369603 NUDCQ9Y266 331 aa7.01□□□□□ -1.29
SMNDC1-202ENST00000369603 NUP153P49790 1475 aaKnown RBP7.01□□□□□ -1.29
SMNDC1-202ENST00000369603 CYB5RLQ6IPT4 315 aa7□□□□□ -1.29
SMNDC1-202ENST00000369603 SAMD9Q5K651 1589 aa7□□□□□ -1.29
SMNDC1-202ENST00000369603 IRX6P78412 446 aaPredicted RBP7□□□□□ -1.29
SMNDC1-202ENST00000369603 ERICH6BQ5W0A0 696 aa7□□□□□ -1.29
SMNDC1-202ENST00000369603 CCDC7Q96M83 1385 aa7□□□□□ -1.29
SMNDC1-202ENST00000369603 NLRP13Q86W25 1043 aa7□□□□□ -1.29
SMNDC1-202ENST00000369603 PRKRIP1Q9H875 184 aaPredicted RBP7□□□□□ -1.29
SMNDC1-202ENST00000369603 NCOA1Q15788 1441 aa7□□□□□ -1.29
SMNDC1-202ENST00000369603 AFAP1Q8N556 730 aa6.99□□□□□ -1.29
SMNDC1-202ENST00000369603 PPP4R2Q9NY27 417 aa6.99□□□□□ -1.29
SMNDC1-202ENST00000369603 NUP160Q12769 1436 aa6.99□□□□□ -1.29
SMNDC1-202ENST00000369603 MLECQ14165 292 aa6.99□□□□□ -1.29
SMNDC1-202ENST00000369603 TCOF1Q13428 1488 aaKnown RBP6.99□□□□□ -1.29
SMNDC1-202ENST00000369603 ITSN2Q9NZM3 1697 aa6.99□□□□□ -1.29
SMNDC1-202ENST00000369603 GPATCH8Q9UKJ3 1502 aaKnown RBP6.98□□□□□ -1.29
SMNDC1-202ENST00000369603 VGFO15240 615 aaPredicted RBP6.98□□□□□ -1.29
SMNDC1-202ENST00000369603 SRPK2P78362 688 aaKnown RBP6.98□□□□□ -1.29
SMNDC1-202ENST00000369603 PNNQ9H307 717 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms