RNA–Protein interactions for RNA: ENST00000369522.7

SYCP1-202, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-202ENST00000369522 FANCD2Q9BXW9 1451 aa10.62□□□□□ -0.71
SYCP1-202ENST00000369522 AKNAQ7Z591 1439 aa10.62□□□□□ -0.71
SYCP1-202ENST00000369522 CCDC136Q96JN2 1154 aa10.62□□□□□ -0.71
SYCP1-202ENST00000369522 MRS2Q9HD23 443 aa10.61□□□□□ -0.71
SYCP1-202ENST00000369522 SPATA31E1Q6ZUB1 1445 aa10.61□□□□□ -0.71
SYCP1-202ENST00000369522 TOPBP1Q92547 1522 aa10.61□□□□□ -0.71
SYCP1-202ENST00000369522 TEX14Q8IWB6 1497 aa10.61□□□□□ -0.71
SYCP1-202ENST00000369522 SMG6Q86US8 1419 aaKnown RBP10.61□□□□□ -0.71
SYCP1-202ENST00000369522 RRP7BPQ9NSQ0 103 aa10.6□□□□□ -0.71
SYCP1-202ENST00000369522 NPM2Q86SE8 214 aaKnown RBP10.59□□□□□ -0.71
SYCP1-202ENST00000369522 L3MBTL2Q969R5 705 aa10.59□□□□□ -0.71
SYCP1-202ENST00000369522 RNF123Q5XPI4 1314 aa10.59□□□□□ -0.71
SYCP1-202ENST00000369522 KIF7Q2M1P5 1343 aa10.58□□□□□ -0.72
SYCP1-202ENST00000369522 RPRD2Q5VT52 1461 aaKnown RBP10.58□□□□□ -0.72
SYCP1-202ENST00000369522 NBPF8Q3BBV2 869 aa10.58□□□□□ -0.72
SYCP1-202ENST00000369522 ANP32AP39687 249 aaKnown RBP10.57□□□□□ -0.72
SYCP1-202ENST00000369522 POLR3GLQ9BT43 218 aa10.57□□□□□ -0.72
SYCP1-202ENST00000369522 BCORL1Q5H9F3 1711 aa10.57□□□□□ -0.72
SYCP1-202ENST00000369522 MPHOSPH9Q99550 1183 aa10.57□□□□□ -0.72
SYCP1-202ENST00000369522 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.57□□□□□ -0.72
SYCP1-202ENST00000369522 CHIC2Q9UKJ5 165 aa10.56□□□□□ -0.72
SYCP1-202ENST00000369522 SALL2Q9Y467 1007 aaPredicted RBP10.56□□□□□ -0.72
SYCP1-202ENST00000369522 DHX29Q7Z478 1369 aaKnown RBP10.56□□□□□ -0.72
SYCP1-202ENST00000369522 FOXD1Q16676 465 aa10.56□□□□□ -0.72
SYCP1-202ENST00000369522 ANKRD30BQ9BXX2 1392 aa10.55□□□□□ -0.72
SYCP1-202ENST00000369522 IPO9Q96P70 1041 aaKnown RBP10.54□□□□□ -0.72
SYCP1-202ENST00000369522 ZBTB47Q9UFB7 747 aaPredicted RBP10.54□□□□□ -0.72
SYCP1-202ENST00000369522 LAMC3Q9Y6N6 1575 aa10.54□□□□□ -0.72
SYCP1-202ENST00000369522 NUDCQ9Y266 331 aa10.53□□□□□ -0.72
SYCP1-202ENST00000369522 NESP48681 1621 aa10.53□□□□□ -0.72
SYCP1-202ENST00000369522 IL27Q8NEV9 243 aa10.53□□□□□ -0.72
SYCP1-202ENST00000369522 MBD5Q9P267 1494 aa10.51□□□□□ -0.73
SYCP1-202ENST00000369522 MIA2Q96PC5 1412 aa10.51□□□□□ -0.73
SYCP1-202ENST00000369522 LAS1LQ9Y4W2 734 aaKnown RBP10.51□□□□□ -0.73
SYCP1-202ENST00000369522 DNMT1P26358 1616 aaKnown RBP10.51□□□□□ -0.73
SYCP1-202ENST00000369522 EPRSP07814 1512 aaKnown RBP10.5□□□□□ -0.73
SYCP1-202ENST00000369522 KDM5CP41229 1560 aa10.5□□□□□ -0.73
SYCP1-202ENST00000369522 CDK13Q14004 1512 aaKnown RBP10.5□□□□□ -0.73
SYCP1-202ENST00000369522 URB2Q14146 1524 aaKnown RBP10.49□□□□□ -0.73
SYCP1-202ENST00000369522 KIF14Q15058 1648 aa10.49□□□□□ -0.73
SYCP1-202ENST00000369522 EIF5BO60841 1220 aaKnown RBP10.49□□□□□ -0.73
SYCP1-202ENST00000369522 DAPK1P53355 1430 aa10.48□□□□□ -0.73
SYCP1-202ENST00000369522 WDR62O43379 1518 aa10.48□□□□□ -0.73
SYCP1-202ENST00000369522 ROCK1Q13464 1354 aa10.48□□□□□ -0.73
SYCP1-202ENST00000369522 GAPVD1Q14C86 1478 aa10.47□□□□□ -0.73
SYCP1-202ENST00000369522 PZPP20742 1482 aa10.46□□□□□ -0.73
SYCP1-202ENST00000369522 TDRD9Q8NDG6 1382 aaKnown RBP10.46□□□□□ -0.74
SYCP1-202ENST00000369522 E9PCH4 1651 aa10.46□□□□□ -0.74
SYCP1-202ENST00000369522 ABCC5O15440 1437 aa10.45□□□□□ -0.74
SYCP1-202ENST00000369522 PNISRQ8TF01 805 aaKnown RBP10.45□□□□□ -0.74
SYCP1-202ENST00000369522 NEFMP07197 916 aa10.45□□□□□ -0.74
SYCP1-202ENST00000369522 LRPPRCP42704 1394 aaKnown RBP10.44□□□□□ -0.74
SYCP1-202ENST00000369522 USP47Q96K76 1375 aa10.44□□□□□ -0.74
SYCP1-202ENST00000369522 PBRM1Q86U86 1689 aa10.43□□□□□ -0.74
SYCP1-202ENST00000369522 ADGBQ8N7X0 1667 aa10.43□□□□□ -0.74
SYCP1-202ENST00000369522 IQGAP2Q13576 1575 aa10.43□□□□□ -0.74
SYCP1-202ENST00000369522 TARBP1Q13395 1621 aaKnown RBP10.41□□□□□ -0.74
SYCP1-202ENST00000369522 CROCC2H7BZ55 1655 aa10.41□□□□□ -0.74
SYCP1-202ENST00000369522 SLC4A1APQ9BWU0 796 aaKnown RBP10.41□□□□□ -0.74
SYCP1-202ENST00000369522 RRP1P56182 461 aaKnown RBP10.4□□□□□ -0.74
SYCP1-202ENST00000369522 ARID4BQ4LE39 1312 aaPredicted RBP10.4□□□□□ -0.74
SYCP1-202ENST00000369522 ZNF326Q5BKZ1 582 aaKnown RBP10.4□□□□□ -0.74
SYCP1-202ENST00000369522 EXOC6Q8TAG9 804 aa10.4□□□□□ -0.75
SYCP1-202ENST00000369522 ZNF644Q9H582 1327 aaPredicted RBP10.39□□□□□ -0.75
SYCP1-202ENST00000369522 RALGAPBQ86X10 1494 aa10.39□□□□□ -0.75
SYCP1-202ENST00000369522 TCERG1O14776 1098 aaKnown RBP10.38□□□□□ -0.75
SYCP1-202ENST00000369522 UHRF1BP1Q6BDS2 1440 aa10.38□□□□□ -0.75
SYCP1-202ENST00000369522 KIAA1107Q9UPP5 1409 aa10.38□□□□□ -0.75
SYCP1-202ENST00000369522 PDE4AP27815 886 aa10.38□□□□□ -0.75
SYCP1-202ENST00000369522 BACH2Q9BYV9 841 aa10.38□□□□□ -0.75
SYCP1-202ENST00000369522 WASHC2CQ9Y4E1 1318 aa10.38□□□□□ -0.75
SYCP1-202ENST00000369522 ADAMTS12P58397 1594 aa10.37□□□□□ -0.75
SYCP1-202ENST00000369522 BRD4O60885 1362 aaPredicted RBP10.37□□□□□ -0.75
SYCP1-202ENST00000369522 ROCK2O75116 1388 aaKnown RBP10.37□□□□□ -0.75
SYCP1-202ENST00000369522 KIF15Q9NS87 1388 aa10.37□□□□□ -0.75
SYCP1-202ENST00000369522 TMC1Q8TDI8 760 aa10.37□□□□□ -0.75
SYCP1-202ENST00000369522 USP35Q9P2H5 1018 aa10.36□□□□□ -0.75
SYCP1-202ENST00000369522 ARID3CA6NKF2 412 aa10.36□□□□□ -0.75
SYCP1-202ENST00000369522 DAXXQ9UER7 740 aaPredicted RBP10.36□□□□□ -0.75
SYCP1-202ENST00000369522 CAMSAP2Q08AD1 1489 aa10.35□□□□□ -0.75
SYCP1-202ENST00000369522 NUP153P49790 1475 aaKnown RBP10.35□□□□□ -0.75
SYCP1-202ENST00000369522 MS4A1P11836 297 aa10.34□□□□□ -0.75
SYCP1-202ENST00000369522 MYBBP1AQ9BQG0 1328 aaKnown RBP10.34□□□□□ -0.75
SYCP1-202ENST00000369522 ITSN2Q9NZM3 1697 aa10.34□□□□□ -0.75
SYCP1-202ENST00000369522 ADGRL2O95490 1459 aa10.34□□□□□ -0.75
SYCP1-202ENST00000369522 RCAN3Q9UKA8 241 aa10.34□□□□□ -0.75
SYCP1-202ENST00000369522 ARHGEF12Q9NZN5 1544 aa10.34□□□□□ -0.75
SYCP1-202ENST00000369522 KIAA0556O60303 1618 aa10.34□□□□□ -0.75
SYCP1-202ENST00000369522 RAPGEF6Q8TEU7 1601 aa10.34□□□□□ -0.75
SYCP1-202ENST00000369522 BRPF3Q9ULD4 1205 aa10.33□□□□□ -0.76
SYCP1-202ENST00000369522 KTN1Q86UP2 1357 aaKnown RBP10.33□□□□□ -0.76
SYCP1-202ENST00000369522 KIAA0586Q9BVV6 1533 aa10.33□□□□□ -0.76
SYCP1-202ENST00000369522 DISP1Q96F81 1524 aa10.32□□□□□ -0.76
SYCP1-202ENST00000369522 ADCY10Q96PN6 1610 aa10.31□□□□□ -0.76
SYCP1-202ENST00000369522 CEP170Q5SW79 1584 aa10.31□□□□□ -0.76
SYCP1-202ENST00000369522 RALBP1Q15311 655 aa10.31□□□□□ -0.76
SYCP1-202ENST00000369522 SKAP1Q86WV1 359 aa10.31□□□□□ -0.76
SYCP1-202ENST00000369522 SLC4A3P48751 1232 aa10.3□□□□□ -0.76
SYCP1-202ENST00000369522 PARD3Q8TEW0 1356 aa10.3□□□□□ -0.76
SYCP1-202ENST00000369522 PKD2Q13563 968 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms