RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 MAGI2Q86UL8 1455 aa16.16■□□□□ 0.18
TPM3-210ENST00000368530 SCAPERQ9BY12 1400 aa16.15■□□□□ 0.18
TPM3-210ENST00000368530 ARHGAP35Q9NRY4 1499 aa16.15■□□□□ 0.18
TPM3-210ENST00000368530 HECW1Q76N89 1606 aa16.14■□□□□ 0.17
TPM3-210ENST00000368530 ZFYVE16Q7Z3T8 1539 aa16.13■□□□□ 0.17
TPM3-210ENST00000368530 POGZQ7Z3K3 1410 aa16.13■□□□□ 0.17
TPM3-210ENST00000368530 UBTFP17480 764 aaKnown RBP16.13■□□□□ 0.17
TPM3-210ENST00000368530 RIMS1Q86UR5 1692 aaKnown RBP16.13■□□□□ 0.17
TPM3-210ENST00000368530 FMN1Q68DA7 1419 aa16.12■□□□□ 0.17
TPM3-210ENST00000368530 EHMT2Q96KQ7 1210 aa16.12■□□□□ 0.17
TPM3-210ENST00000368530 HSPA2P54652 639 aa16.1■□□□□ 0.17
TPM3-210ENST00000368530 LOC105371045A0A1W2PR82 267 aa16.09■□□□□ 0.17
TPM3-210ENST00000368530 EFCAB2Q5VUJ9 269 aa16.09■□□□□ 0.17
TPM3-210ENST00000368530 ATP1B4Q9UN42 357 aaPredicted RBP16.09■□□□□ 0.17
TPM3-210ENST00000368530 ATP10AO60312 1499 aa16.08■□□□□ 0.16
TPM3-210ENST00000368530 MLECQ14165 292 aa16.08■□□□□ 0.16
TPM3-210ENST00000368530 CDK11AQ9UQ88 783 aaPredicted RBP16.07■□□□□ 0.16
TPM3-210ENST00000368530 TROQ12816 1431 aaPredicted RBP16.06■□□□□ 0.16
TPM3-210ENST00000368530 KIF14Q15058 1648 aa16.06■□□□□ 0.16
TPM3-210ENST00000368530 ARHGEF12Q9NZN5 1544 aa16.06■□□□□ 0.16
TPM3-210ENST00000368530 AFAP1Q8N556 730 aa16.05■□□□□ 0.16
TPM3-210ENST00000368530 C9orf84Q5VXU9 1444 aa16.03■□□□□ 0.16
TPM3-210ENST00000368530 MYO5CQ9NQX4 1742 aa16.02■□□□□ 0.16
TPM3-210ENST00000368530 ZNF518AQ6AHZ1 1483 aa16.02■□□□□ 0.15
TPM3-210ENST00000368530 KDM5CP41229 1560 aa16.01■□□□□ 0.15
TPM3-210ENST00000368530 LRRIQ1Q96JM4 1722 aa16.01■□□□□ 0.15
TPM3-210ENST00000368530 MSH5O43196 834 aa16.01■□□□□ 0.15
TPM3-210ENST00000368530 CEBPAP49715 358 aaPredicted RBP16.01■□□□□ 0.15
TPM3-210ENST00000368530 FER1L4A9Z1Z3 1794 aa15.99■□□□□ 0.15
TPM3-210ENST00000368530 ARHGAP5Q13017 1502 aa15.99■□□□□ 0.15
TPM3-210ENST00000368530 CLIP1P30622 1438 aa15.98■□□□□ 0.15
TPM3-210ENST00000368530 MLH3Q9UHC1 1453 aa15.96■□□□□ 0.15
TPM3-210ENST00000368530 CASKIN1Q8WXD9 1431 aa15.96■□□□□ 0.15
TPM3-210ENST00000368530 TRAPPC8Q9Y2L5 1435 aa15.96■□□□□ 0.14
TPM3-210ENST00000368530 CDC42BPBQ9Y5S2 1711 aa15.96■□□□□ 0.14
TPM3-210ENST00000368530 DIP2CQ9Y2E4 1556 aa15.95■□□□□ 0.14
TPM3-210ENST00000368530 CERKQ8TCT0 537 aa15.95■□□□□ 0.14
TPM3-210ENST00000368530 REREQ9P2R6 1566 aa15.95■□□□□ 0.14
TPM3-210ENST00000368530 ABCC1P33527 1531 aa15.92■□□□□ 0.14
TPM3-210ENST00000368530 ABCA6Q8N139 1617 aa15.91■□□□□ 0.14
TPM3-210ENST00000368530 PREX1Q8TCU6 1659 aa15.91■□□□□ 0.14
TPM3-210ENST00000368530 AGLP35573 1532 aa15.91■□□□□ 0.14
TPM3-210ENST00000368530 PREX2Q70Z35 1606 aa15.91■□□□□ 0.14
TPM3-210ENST00000368530 CCDC18Q5T9S5 1454 aa15.91■□□□□ 0.14
TPM3-210ENST00000368530 MYT1LQ9UL68 1186 aa15.89■□□□□ 0.13
TPM3-210ENST00000368530 STRCQ7RTU9 1775 aa15.88■□□□□ 0.13
TPM3-210ENST00000368530 KIDINS220Q9ULH0 1771 aa15.87■□□□□ 0.13
TPM3-210ENST00000368530 UHRF1BP1Q6BDS2 1440 aa15.87■□□□□ 0.13
TPM3-210ENST00000368530 ITSN2Q9NZM3 1697 aa15.86■□□□□ 0.13
TPM3-210ENST00000368530 FYCO1Q9BQS8 1478 aa15.86■□□□□ 0.13
TPM3-210ENST00000368530 GPATCH8Q9UKJ3 1502 aaKnown RBP15.85■□□□□ 0.13
TPM3-210ENST00000368530 DMRT2Q9Y5R5 561 aa15.85■□□□□ 0.13
TPM3-210ENST00000368530 CDC42BPAQ5VT25 1732 aa15.85■□□□□ 0.13
TPM3-210ENST00000368530 SETD1BQ9UPS6 1966 aaKnown RBP15.85■□□□□ 0.13
TPM3-210ENST00000368530 C3P01024 1663 aa15.84■□□□□ 0.13
TPM3-210ENST00000368530 SAMD9LQ8IVG5 1584 aa15.83■□□□□ 0.12
TPM3-210ENST00000368530 HNRNPMP52272 730 aaKnown RBP eCLIP15.83■□□□□ 0.127e-7■■■□□ 16.5
TPM3-210ENST00000368530 PTPRTO14522 1441 aa15.81■□□□□ 0.12
TPM3-210ENST00000368530 ZNF777Q9ULD5 760 aaPredicted RBP15.81■□□□□ 0.12
TPM3-210ENST00000368530 CNTLNQ9NXG0 1405 aa15.8■□□□□ 0.12
TPM3-210ENST00000368530 KIAA1107Q9UPP5 1409 aa15.79■□□□□ 0.12
TPM3-210ENST00000368530 SYCP2Q9BX26 1530 aa15.79■□□□□ 0.12
TPM3-210ENST00000368530 ESF1Q9H501 851 aaKnown RBP15.78■□□□□ 0.12
TPM3-210ENST00000368530 SPAG9O60271 1321 aaKnown RBP15.78■□□□□ 0.12
TPM3-210ENST00000368530 ZMYM3Q14202 1370 aa15.78■□□□□ 0.12
TPM3-210ENST00000368530 CFDP1Q9UEE9 299 aaPredicted RBP15.77■□□□□ 0.11
TPM3-210ENST00000368530 NPATQ14207 1427 aa15.76■□□□□ 0.11
TPM3-210ENST00000368530 NCOA1Q15788 1441 aa15.76■□□□□ 0.11
TPM3-210ENST00000368530 LTBP4Q8N2S1 1624 aa15.75■□□□□ 0.11
TPM3-210ENST00000368530 PLXNC1O60486 1568 aa15.74■□□□□ 0.11
TPM3-210ENST00000368530 ZNF644Q9H582 1327 aaPredicted RBP15.74■□□□□ 0.11
TPM3-210ENST00000368530 ATP7AQ04656 1500 aa15.73■□□□□ 0.11
TPM3-210ENST00000368530 PLEKHH2Q8IVE3 1493 aa15.73■□□□□ 0.11
TPM3-210ENST00000368530 CCNB3Q8WWL7 1395 aa15.73■□□□□ 0.11
TPM3-210ENST00000368530 INO80Q9ULG1 1556 aaPredicted RBP15.73■□□□□ 0.11
TPM3-210ENST00000368530 A2MP01023 1474 aa15.73■□□□□ 0.11
TPM3-210ENST00000368530 MROH2AA6NES4 1674 aa15.73■□□□□ 0.11
TPM3-210ENST00000368530 MBD5Q9P267 1494 aa15.71■□□□□ 0.11
TPM3-210ENST00000368530 SUPT6HQ7KZ85 1726 aaKnown RBP15.7■□□□□ 0.1
TPM3-210ENST00000368530 PTPRKQ15262 1439 aa15.7■□□□□ 0.1
TPM3-210ENST00000368530 MTUS2Q5JR59 1369 aa15.7■□□□□ 0.1
TPM3-210ENST00000368530 CAMSAP1Q5T5Y3 1602 aa15.69■□□□□ 0.1
TPM3-210ENST00000368530 NCKAP5LQ9HCH0 1330 aa15.69■□□□□ 0.1
TPM3-210ENST00000368530 GGT6Q6P531 493 aa15.68■□□□□ 0.1
TPM3-210ENST00000368530 TIAM1Q13009 1591 aa15.67■□□□□ 0.1
TPM3-210ENST00000368530 CLTCQ00610 1675 aaKnown RBP15.66■□□□□ 0.1
TPM3-210ENST00000368530 IQSEC2Q5JU85 1478 aa15.66■□□□□ 0.1
TPM3-210ENST00000368530 PPP4R3CPQ6ZMV5 832 aa15.66■□□□□ 0.1
TPM3-210ENST00000368530 ILDR2Q71H61 639 aa15.66■□□□□ 0.1
TPM3-210ENST00000368530 RTEL1-TNFRSF6BF6WH68 1400 aa15.66■□□□□ 0.1
TPM3-210ENST00000368530 CEP162Q5TB80 1403 aa15.66■□□□□ 0.1
TPM3-210ENST00000368530 PLA2R1Q13018 1463 aa15.64■□□□□ 0.09
TPM3-210ENST00000368530 TCOF1Q13428 1488 aaKnown RBP15.64■□□□□ 0.09
TPM3-210ENST00000368530 DHX29Q7Z478 1369 aaKnown RBP15.64■□□□□ 0.09
TPM3-210ENST00000368530 ZNF335Q9H4Z2 1342 aaPredicted RBP15.63■□□□□ 0.09
TPM3-210ENST00000368530 EHBP1L1Q8N3D4 1523 aa15.63■□□□□ 0.09
TPM3-210ENST00000368530 PKD2Q13563 968 aa15.63■□□□□ 0.09
TPM3-210ENST00000368530 ZNF142P52746 1687 aaPredicted RBP15.62■□□□□ 0.09
TPM3-210ENST00000368530 DISP3Q9P2K9 1392 aa15.62■□□□□ 0.09
TPM3-210ENST00000368530 MYO3AQ8NEV4 1616 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms