RNA–Protein interactions for RNA: ENST00000368519.5

C1orf43-205, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 2 BASIC

Gene C1orf43, Length 1,163 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-205ENST00000368519 RICTORQ6R327 1708 aa23.63■■□□□ 1.37
C1orf43-205ENST00000368519 CFAP74Q9C0B2 1584 aa23.63■■□□□ 1.37
C1orf43-205ENST00000368519 PLCH2O75038 1416 aa23.62■■□□□ 1.37
C1orf43-205ENST00000368519 MYO5CQ9NQX4 1742 aa23.6■■□□□ 1.37
C1orf43-205ENST00000368519 DENND4BO75064 1496 aaPredicted RBP23.57■■□□□ 1.36
C1orf43-205ENST00000368519 NCOA2Q15596 1464 aa23.55■■□□□ 1.36
C1orf43-205ENST00000368519 CDC42BPBQ9Y5S2 1711 aa23.53■■□□□ 1.36
C1orf43-205ENST00000368519 PPARGC1BQ86YN6 1023 aaKnown RBP23.52■■□□□ 1.36
C1orf43-205ENST00000368519 SUPT6HQ7KZ85 1726 aaKnown RBP23.52■■□□□ 1.36
C1orf43-205ENST00000368519 CCNB3Q8WWL7 1395 aa23.52■■□□□ 1.36
C1orf43-205ENST00000368519 ZMYM4Q5VZL5 1548 aa23.51■■□□□ 1.35
C1orf43-205ENST00000368519 ARHGEF40Q8TER5 1519 aa23.5■■□□□ 1.35
C1orf43-205ENST00000368519 POGZQ7Z3K3 1410 aa23.48■■□□□ 1.35
C1orf43-205ENST00000368519 SCAPERQ9BY12 1400 aa23.48■■□□□ 1.35
C1orf43-205ENST00000368519 GPATCH8Q9UKJ3 1502 aaKnown RBP23.48■■□□□ 1.35
C1orf43-205ENST00000368519 PREX2Q70Z35 1606 aa23.47■■□□□ 1.35
C1orf43-205ENST00000368519 ARHGAP5Q13017 1502 aa23.46■■□□□ 1.35
C1orf43-205ENST00000368519 CDC42BPAQ5VT25 1732 aa23.46■■□□□ 1.35
C1orf43-205ENST00000368519 EFCAB2Q5VUJ9 269 aa23.46■■□□□ 1.35
C1orf43-205ENST00000368519 SIGLEC1Q9BZZ2 1709 aa23.45■■□□□ 1.34
C1orf43-205ENST00000368519 YEATS2Q9ULM3 1422 aa23.44■■□□□ 1.34
C1orf43-205ENST00000368519 ADAMTSL3P82987 1691 aa23.44■■□□□ 1.34
C1orf43-205ENST00000368519 CFDP1Q9UEE9 299 aaPredicted RBP23.43■■□□□ 1.34
C1orf43-205ENST00000368519 MYOM3Q5VTT5 1437 aa23.42■■□□□ 1.34
C1orf43-205ENST00000368519 BCORL1Q5H9F3 1711 aa23.42■■□□□ 1.34
C1orf43-205ENST00000368519 ZFYVE16Q7Z3T8 1539 aa23.41■■□□□ 1.34
C1orf43-205ENST00000368519 MAGI2Q86UL8 1455 aa23.4■■□□□ 1.34
C1orf43-205ENST00000368519 MIA2Q96PC5 1412 aa23.4■■□□□ 1.34
C1orf43-205ENST00000368519 ARHGEF12Q9NZN5 1544 aa23.38■■□□□ 1.33
C1orf43-205ENST00000368519 KDM5CP41229 1560 aa23.38■■□□□ 1.33
C1orf43-205ENST00000368519 ABCC1P33527 1531 aa23.37■■□□□ 1.33
C1orf43-205ENST00000368519 ITSN2Q9NZM3 1697 aa23.35■■□□□ 1.33
C1orf43-205ENST00000368519 ZNF518AQ6AHZ1 1483 aa23.34■■□□□ 1.33
C1orf43-205ENST00000368519 FGD6Q6ZV73 1430 aa23.33■■□□□ 1.33
C1orf43-205ENST00000368519 AFAP1Q8N556 730 aa23.33■■□□□ 1.33
C1orf43-205ENST00000368519 ZNF777Q9ULD5 760 aaPredicted RBP23.33■■□□□ 1.33
C1orf43-205ENST00000368519 MADDQ8WXG6 1647 aa23.33■■□□□ 1.32
C1orf43-205ENST00000368519 SAMD9LQ8IVG5 1584 aa23.32■■□□□ 1.32
C1orf43-205ENST00000368519 TRAPPC8Q9Y2L5 1435 aa23.32■■□□□ 1.32
C1orf43-205ENST00000368519 HECW2Q9P2P5 1572 aa23.29■■□□□ 1.32
C1orf43-205ENST00000368519 PTPRMP28827 1452 aa23.29■■□□□ 1.32
C1orf43-205ENST00000368519 PLEKHH2Q8IVE3 1493 aa23.29■■□□□ 1.32
C1orf43-205ENST00000368519 ARID4BQ4LE39 1312 aaPredicted RBP23.29■■□□□ 1.32
C1orf43-205ENST00000368519 ZNF644Q9H582 1327 aaPredicted RBP23.29■■□□□ 1.32
C1orf43-205ENST00000368519 KIAA1107Q9UPP5 1409 aa23.28■■□□□ 1.32
C1orf43-205ENST00000368519 ATP10AO60312 1499 aa23.28■■□□□ 1.32
C1orf43-205ENST00000368519 RRBP1Q9P2E9 1410 aaKnown RBP23.27■■□□□ 1.32
C1orf43-205ENST00000368519 DIP2CQ9Y2E4 1556 aa23.27■■□□□ 1.32
C1orf43-205ENST00000368519 C9orf84Q5VXU9 1444 aa23.26■■□□□ 1.31
C1orf43-205ENST00000368519 TCOF1Q13428 1488 aaKnown RBP23.26■■□□□ 1.31
C1orf43-205ENST00000368519 RSPH4AQ5TD94 716 aa23.26■■□□□ 1.31
C1orf43-205ENST00000368519 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.26■■□□□ 1.31
C1orf43-205ENST00000368519 MLH3Q9UHC1 1453 aa23.25■■□□□ 1.31
C1orf43-205ENST00000368519 ABCA6Q8N139 1617 aa23.25■■□□□ 1.31
C1orf43-205ENST00000368519 SYCP2Q9BX26 1530 aa23.24■■□□□ 1.31
C1orf43-205ENST00000368519 RIMS1Q86UR5 1692 aaKnown RBP23.24■■□□□ 1.31
C1orf43-205ENST00000368519 KIDINS220Q9ULH0 1771 aa23.24■■□□□ 1.31
C1orf43-205ENST00000368519 CAMSAP2Q08AD1 1489 aa23.24■■□□□ 1.31
C1orf43-205ENST00000368519 PTPN23Q9H3S7 1636 aa23.22■■□□□ 1.31
C1orf43-205ENST00000368519 HNRNPMP52272 730 aaKnown RBP eCLIP23.21■■□□□ 1.31
C1orf43-205ENST00000368519 FAM50AQ14320 339 aaKnown RBP23.21■■□□□ 1.31
C1orf43-205ENST00000368519 REREQ9P2R6 1566 aa23.2■■□□□ 1.3
C1orf43-205ENST00000368519 MBD5Q9P267 1494 aa23.2■■□□□ 1.3
C1orf43-205ENST00000368519 FER1L4A9Z1Z3 1794 aa23.18■■□□□ 1.3
C1orf43-205ENST00000368519 MLECQ14165 292 aa23.15■■□□□ 1.3
C1orf43-205ENST00000368519 ARHGEF5Q12774 1597 aa23.13■■□□□ 1.29
C1orf43-205ENST00000368519 TSPY4P0CV99 314 aa23.12■■□□□ 1.29
C1orf43-205ENST00000368519 TSPY10P0CW01 314 aa23.12■■□□□ 1.29
C1orf43-205ENST00000368519 MYT1LQ9UL68 1186 aa23.12■■□□□ 1.29
C1orf43-205ENST00000368519 INO80Q9ULG1 1556 aaPredicted RBP23.12■■□□□ 1.29
C1orf43-205ENST00000368519 AGLP35573 1532 aa23.12■■□□□ 1.29
C1orf43-205ENST00000368519 CCDC141Q6ZP82 1450 aa23.11■■□□□ 1.29
C1orf43-205ENST00000368519 ABCC5O15440 1437 aa23.1■■□□□ 1.29
C1orf43-205ENST00000368519 DAPK1P53355 1430 aa23.09■■□□□ 1.29
C1orf43-205ENST00000368519 ATP7AQ04656 1500 aa23.09■■□□□ 1.29
C1orf43-205ENST00000368519 SPAG9O60271 1321 aaKnown RBP23.08■■□□□ 1.28
C1orf43-205ENST00000368519 TRIM26Q12899 539 aaPredicted RBP23.06■■□□□ 1.28
C1orf43-205ENST00000368519 DNMT1P26358 1616 aaKnown RBP23.05■■□□□ 1.28
C1orf43-205ENST00000368519 RTEL1-TNFRSF6BF6WH68 1400 aa23.05■■□□□ 1.28
C1orf43-205ENST00000368519 LMTK3Q96Q04 1460 aa23.05■■□□□ 1.28
C1orf43-205ENST00000368519 PLXNC1O60486 1568 aa23.04■■□□□ 1.28
C1orf43-205ENST00000368519 SHANK2Q9UPX8 1470 aa23.04■■□□□ 1.28
C1orf43-205ENST00000368519 ITGAEP38570 1179 aa23.02■■□□□ 1.28
C1orf43-205ENST00000368519 PTPRKQ15262 1439 aa23■■□□□ 1.27
C1orf43-205ENST00000368519 PLPPR3Q6T4P5 718 aa23■■□□□ 1.27
C1orf43-205ENST00000368519 MAST1Q9Y2H9 1570 aa22.99■■□□□ 1.27
C1orf43-205ENST00000368519 ADGBQ8N7X0 1667 aa22.98■■□□□ 1.27
C1orf43-205ENST00000368519 CHIC2Q9UKJ5 165 aa22.98■■□□□ 1.27
C1orf43-205ENST00000368519 ROCK1Q13464 1354 aa22.98■■□□□ 1.27
C1orf43-205ENST00000368519 A2MP01023 1474 aa22.98■■□□□ 1.27
C1orf43-205ENST00000368519 CEBPAP49715 358 aaPredicted RBP22.97■■□□□ 1.27
C1orf43-205ENST00000368519 ANKRD30AQ9BXX3 1397 aa22.97■■□□□ 1.27
C1orf43-205ENST00000368519 C3P01024 1663 aa22.97■■□□□ 1.27
C1orf43-205ENST00000368519 ADGRL2O95490 1459 aa22.95■■□□□ 1.26
C1orf43-205ENST00000368519 NCOA1Q15788 1441 aa22.95■■□□□ 1.26
C1orf43-205ENST00000368519 CROCC2H7BZ55 1655 aa22.93■■□□□ 1.26
C1orf43-205ENST00000368519 SETD1BQ9UPS6 1966 aaKnown RBP22.92■■□□□ 1.26
C1orf43-205ENST00000368519 PREX1Q8TCU6 1659 aa22.9■■□□□ 1.26
C1orf43-205ENST00000368519 RRP7BPQ9NSQ0 103 aa22.9■■□□□ 1.26
C1orf43-205ENST00000368519 KIF15Q9NS87 1388 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms