RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 KIF14Q15058 1648 aa20.38■□□□□ 0.85
USF1-202ENST00000368020 ACIN1Q9UKV3 1341 aaKnown RBP20.37■□□□□ 0.85
USF1-202ENST00000368020 GCC2Q8IWJ2 1684 aa20.36■□□□□ 0.85
USF1-202ENST00000368020 ABCC10Q5T3U5 1492 aa20.34■□□□□ 0.85
USF1-202ENST00000368020 KCNH8Q96L42 1107 aa20.32■□□□□ 0.84
USF1-202ENST00000368020 ITSN2Q9NZM3 1697 aa20.31■□□□□ 0.84
USF1-202ENST00000368020 NAIPQ13075 1403 aa20.31■□□□□ 0.84
USF1-202ENST00000368020 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.3■□□□□ 0.84
USF1-202ENST00000368020 PTPRKQ15262 1439 aa20.3■□□□□ 0.84
USF1-202ENST00000368020 GPATCH8Q9UKJ3 1502 aaKnown RBP20.28■□□□□ 0.84
USF1-202ENST00000368020 ABCA9Q8IUA7 1624 aa20.26■□□□□ 0.83
USF1-202ENST00000368020 TTC37Q6PGP7 1564 aa20.25■□□□□ 0.83
USF1-202ENST00000368020 DNMT1P26358 1616 aaKnown RBP20.25■□□□□ 0.83
USF1-202ENST00000368020 CENPBP07199 599 aaPredicted RBP20.24■□□□□ 0.83
USF1-202ENST00000368020 CDC42BPAQ5VT25 1732 aa20.24■□□□□ 0.83
USF1-202ENST00000368020 GLI2P10070 1586 aa20.23■□□□□ 0.83
USF1-202ENST00000368020 ARAP3Q8WWN8 1544 aa20.23■□□□□ 0.83
USF1-202ENST00000368020 ROCK1Q13464 1354 aa20.22■□□□□ 0.83
USF1-202ENST00000368020 PLCH2O75038 1416 aa20.22■□□□□ 0.83
USF1-202ENST00000368020 CFDP1Q9UEE9 299 aaPredicted RBP20.22■□□□□ 0.83
USF1-202ENST00000368020 MYO5CQ9NQX4 1742 aa20.21■□□□□ 0.83
USF1-202ENST00000368020 PREX2Q70Z35 1606 aa20.2■□□□□ 0.83
USF1-202ENST00000368020 CDC42BPBQ9Y5S2 1711 aa20.19■□□□□ 0.82
USF1-202ENST00000368020 DIP2BQ9P265 1576 aa20.18■□□□□ 0.82
USF1-202ENST00000368020 DAPK1P53355 1430 aa20.17■□□□□ 0.82
USF1-202ENST00000368020 CD109Q6YHK3 1445 aa20.16■□□□□ 0.82
USF1-202ENST00000368020 EFCAB2Q5VUJ9 269 aa20.15■□□□□ 0.82
USF1-202ENST00000368020 ADGBQ8N7X0 1667 aa20.14■□□□□ 0.81
USF1-202ENST00000368020 FAM69CQ0P6D2 419 aa20.14■□□□□ 0.81
USF1-202ENST00000368020 MAP3K4Q9Y6R4 1608 aa20.14■□□□□ 0.81
USF1-202ENST00000368020 ARHGAP5Q13017 1502 aa20.13■□□□□ 0.81
USF1-202ENST00000368020 TONSLQ96HA7 1378 aa20.12■□□□□ 0.81
USF1-202ENST00000368020 CROCC2H7BZ55 1655 aa20.11■□□□□ 0.81
USF1-202ENST00000368020 KIF13AQ9H1H9 1805 aa20.1■□□□□ 0.81
USF1-202ENST00000368020 CAMSAP2Q08AD1 1489 aa20.1■□□□□ 0.81
USF1-202ENST00000368020 PLEKHH2Q8IVE3 1493 aa20.1■□□□□ 0.81
USF1-202ENST00000368020 ABCC5O15440 1437 aa20.1■□□□□ 0.81
USF1-202ENST00000368020 NEUROD1Q13562 356 aa20.1■□□□□ 0.81
USF1-202ENST00000368020 SIN3AQ96ST3 1273 aa20.1■□□□□ 0.81
USF1-202ENST00000368020 ZNF644Q9H582 1327 aaPredicted RBP20.09■□□□□ 0.81
USF1-202ENST00000368020 KIAA1107Q9UPP5 1409 aa20.09■□□□□ 0.81
USF1-202ENST00000368020 ZNF777Q9ULD5 760 aaPredicted RBP20.09■□□□□ 0.81
USF1-202ENST00000368020 FANCAO15360 1455 aa20.09■□□□□ 0.81
USF1-202ENST00000368020 RSPH4AQ5TD94 716 aa20.07■□□□□ 0.8
USF1-202ENST00000368020 MIER1Q8N108 512 aa20.07■□□□□ 0.8
USF1-202ENST00000368020 SAMD9LQ8IVG5 1584 aa20.07■□□□□ 0.8
USF1-202ENST00000368020 PPP1R15AO75807 674 aaPredicted RBP20.07■□□□□ 0.8
USF1-202ENST00000368020 RRP7BPQ9NSQ0 103 aa20.07■□□□□ 0.8
USF1-202ENST00000368020 CFAP74Q9C0B2 1584 aa20.06■□□□□ 0.8
USF1-202ENST00000368020 NEO1Q92859 1461 aa20.06■□□□□ 0.8
USF1-202ENST00000368020 ADGRL2O95490 1459 aa20.05■□□□□ 0.8
USF1-202ENST00000368020 CHIC2Q9UKJ5 165 aa20.05■□□□□ 0.8
USF1-202ENST00000368020 MBD5Q9P267 1494 aa20.03■□□□□ 0.8
USF1-202ENST00000368020 ARHGEF5Q12774 1597 aa20.03■□□□□ 0.8
USF1-202ENST00000368020 KDM6BO15054 1643 aa20.03■□□□□ 0.8
USF1-202ENST00000368020 TEX14Q8IWB6 1497 aa20.02■□□□□ 0.8
USF1-202ENST00000368020 SHANK2Q9UPX8 1470 aa20.02■□□□□ 0.8
USF1-202ENST00000368020 ABCC1P33527 1531 aa20.02■□□□□ 0.8
USF1-202ENST00000368020 TRIM52Q96A61 297 aa19.99■□□□□ 0.79
USF1-202ENST00000368020 SYCP2Q9BX26 1530 aa19.99■□□□□ 0.79
USF1-202ENST00000368020 PPRC1Q5VV67 1664 aaKnown RBP19.99■□□□□ 0.79
USF1-202ENST00000368020 HNRNPMP52272 730 aaKnown RBP eCLIP19.99■□□□□ 0.79
USF1-202ENST00000368020 ADGRL1O94910 1474 aa19.99■□□□□ 0.79
USF1-202ENST00000368020 ARHGEF12Q9NZN5 1544 aa19.98■□□□□ 0.79
USF1-202ENST00000368020 CCDC141Q6ZP82 1450 aa19.97■□□□□ 0.79
USF1-202ENST00000368020 TSPOAP1O95153 1857 aa19.97■□□□□ 0.79
USF1-202ENST00000368020 NCOA1Q15788 1441 aa19.97■□□□□ 0.79
USF1-202ENST00000368020 ANKRD30AQ9BXX3 1397 aa19.97■□□□□ 0.79
USF1-202ENST00000368020 DENND4BO75064 1496 aaPredicted RBP19.96■□□□□ 0.79
USF1-202ENST00000368020 SCAPERQ9BY12 1400 aa19.96■□□□□ 0.79
USF1-202ENST00000368020 MPHOSPH9Q99550 1183 aa19.96■□□□□ 0.79
USF1-202ENST00000368020 TSPY4P0CV99 314 aa19.95■□□□□ 0.78
USF1-202ENST00000368020 TSPY10P0CW01 314 aa19.95■□□□□ 0.78
USF1-202ENST00000368020 TRHP20396 242 aaPredicted RBP19.94■□□□□ 0.78
USF1-202ENST00000368020 SCAF1Q9H7N4 1312 aaKnown RBP19.92■□□□□ 0.78
USF1-202ENST00000368020 TRAPPC8Q9Y2L5 1435 aa19.92■□□□□ 0.78
USF1-202ENST00000368020 ZNF518AQ6AHZ1 1483 aa19.91■□□□□ 0.78
USF1-202ENST00000368020 MAST1Q9Y2H9 1570 aa19.9■□□□□ 0.78
USF1-202ENST00000368020 C9orf84Q5VXU9 1444 aa19.9■□□□□ 0.78
USF1-202ENST00000368020 POGZQ7Z3K3 1410 aa19.89■□□□□ 0.78
USF1-202ENST00000368020 RPRD2Q5VT52 1461 aaKnown RBP19.88■□□□□ 0.77
USF1-202ENST00000368020 AFAP1Q8N556 730 aa19.88■□□□□ 0.77
USF1-202ENST00000368020 RTEL1-TNFRSF6BF6WH68 1400 aa19.88■□□□□ 0.77
USF1-202ENST00000368020 ANKRD30BQ9BXX2 1392 aa19.87■□□□□ 0.77
USF1-202ENST00000368020 KDM5CP41229 1560 aa19.86■□□□□ 0.77
USF1-202ENST00000368020 SPAG9O60271 1321 aaKnown RBP19.85■□□□□ 0.77
USF1-202ENST00000368020 ANKRD50Q9ULJ7 1429 aa19.85■□□□□ 0.77
USF1-202ENST00000368020 SLC4A1APQ9BWU0 796 aaKnown RBP19.84■□□□□ 0.77
USF1-202ENST00000368020 PZPP20742 1482 aa19.84■□□□□ 0.77
USF1-202ENST00000368020 KDM5DQ9BY66 1539 aa19.84■□□□□ 0.77
USF1-202ENST00000368020 MLH3Q9UHC1 1453 aa19.83■□□□□ 0.77
USF1-202ENST00000368020 RICTORQ6R327 1708 aa19.83■□□□□ 0.77
USF1-202ENST00000368020 PLXNC1O60486 1568 aa19.82■□□□□ 0.76
USF1-202ENST00000368020 YTHDC1Q96MU7 727 aaKnown RBP19.82■□□□□ 0.76
USF1-202ENST00000368020 INO80Q9ULG1 1556 aaPredicted RBP19.81■□□□□ 0.76
USF1-202ENST00000368020 RAPGEF3O95398 923 aa19.81■□□□□ 0.76
USF1-202ENST00000368020 ZFYVE16Q7Z3T8 1539 aa19.81■□□□□ 0.76
USF1-202ENST00000368020 ATP7AQ04656 1500 aa19.8■□□□□ 0.76
USF1-202ENST00000368020 ZMYM4Q5VZL5 1548 aa19.79■□□□□ 0.76
USF1-202ENST00000368020 FRMPD1Q5SYB0 1578 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms