RNA–Protein interactions for RNA: ENST00000367573.6

CACNA1E-206, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1E, Length 7,067 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-206ENST00000367573 TRIM44Q96DX7 344 aaPredicted RBP13.78□□□□□ -0.2
CACNA1E-206ENST00000367573 CCDC180Q9P1Z9 1646 aa13.77□□□□□ -0.2
CACNA1E-206ENST00000367573 GORABQ5T7V8 394 aa13.77□□□□□ -0.21
CACNA1E-206ENST00000367573 DNTTIP2Q5QJE6 756 aaKnown RBP13.76□□□□□ -0.21
CACNA1E-206ENST00000367573 CHMP4BQ9H444 224 aaKnown RBP13.75□□□□□ -0.21
CACNA1E-206ENST00000367573 FRAT2O75474 233 aaPredicted RBP13.75□□□□□ -0.21
CACNA1E-206ENST00000367573 SIN3AQ96ST3 1273 aa13.75□□□□□ -0.21
CACNA1E-206ENST00000367573 DCAF8L1A6NGE4 600 aa13.74□□□□□ -0.21
CACNA1E-206ENST00000367573 HSP90AB1P08238 724 aaKnown RBP13.74□□□□□ -0.21
CACNA1E-206ENST00000367573 DDRGK1Q96HY6 314 aa13.74□□□□□ -0.21
CACNA1E-206ENST00000367573 CARMIL2Q6F5E8 1435 aa13.73□□□□□ -0.21
CACNA1E-206ENST00000367573 KIF3BO15066 747 aa13.73□□□□□ -0.21
CACNA1E-206ENST00000367573 CUX2O14529 1486 aa13.72□□□□□ -0.21
CACNA1E-206ENST00000367573 GOLGA6L4A6NEF3 574 aa13.72□□□□□ -0.21
CACNA1E-206ENST00000367573 MIER1Q8N108 512 aa13.71□□□□□ -0.21
CACNA1E-206ENST00000367573 WASHC2CQ9Y4E1 1318 aa13.71□□□□□ -0.21
CACNA1E-206ENST00000367573 CEP162Q5TB80 1403 aa13.71□□□□□ -0.22
CACNA1E-206ENST00000367573 NACADO15069 1562 aa13.7□□□□□ -0.22
CACNA1E-206ENST00000367573 AMPHP49418 695 aa13.7□□□□□ -0.22
CACNA1E-206ENST00000367573 MS4A1P11836 297 aa13.7□□□□□ -0.22
CACNA1E-206ENST00000367573 EFCAB2Q5VUJ9 269 aa13.7□□□□□ -0.22
CACNA1E-206ENST00000367573 FOXD1Q16676 465 aa13.7□□□□□ -0.22
CACNA1E-206ENST00000367573 VPS53Q5VIR6 699 aa13.69□□□□□ -0.22
CACNA1E-206ENST00000367573 GOLGA6L6A8MZA4 724 aa13.69□□□□□ -0.22
CACNA1E-206ENST00000367573 SYTL4Q96C24 671 aaPredicted RBP13.68□□□□□ -0.22
CACNA1E-206ENST00000367573 ANO8Q9HCE9 1232 aaPredicted RBP13.68□□□□□ -0.22
CACNA1E-206ENST00000367573 CARMIL1Q5VZK9 1371 aa13.68□□□□□ -0.22
CACNA1E-206ENST00000367573 PDE4CQ08493 712 aa13.68□□□□□ -0.22
CACNA1E-206ENST00000367573 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.68□□□□□ -0.22
CACNA1E-206ENST00000367573 KRI1Q8N9T8 703 aaKnown RBP13.67□□□□□ -0.22
CACNA1E-206ENST00000367573 U2AF1L5P0DN76 240 aaPredicted RBP13.67□□□□□ -0.22
CACNA1E-206ENST00000367573 U2AF1Q01081 240 aaKnown RBP eCLIP13.67□□□□□ -0.22
CACNA1E-206ENST00000367573 CECR2Q9BXF3 1484 aa13.67□□□□□ -0.22
CACNA1E-206ENST00000367573 MCCP23508 829 aa13.67□□□□□ -0.22
CACNA1E-206ENST00000367573 PKD2Q13563 968 aa13.66□□□□□ -0.22
CACNA1E-206ENST00000367573 SPAG9O60271 1321 aaKnown RBP13.66□□□□□ -0.22
CACNA1E-206ENST00000367573 SUPT16HQ9Y5B9 1047 aaKnown RBP13.66□□□□□ -0.22
CACNA1E-206ENST00000367573 KIAA1211Q6ZU35 1233 aa13.65□□□□□ -0.22
CACNA1E-206ENST00000367573 HNRNPMP52272 730 aaKnown RBP eCLIP13.65□□□□□ -0.22
CACNA1E-206ENST00000367573 PDS5BQ9NTI5 1447 aa13.65□□□□□ -0.22
CACNA1E-206ENST00000367573 FBXW7Q969H0 707 aa13.64□□□□□ -0.23
CACNA1E-206ENST00000367573 SPRYD3Q8NCJ5 442 aa13.64□□□□□ -0.23
CACNA1E-206ENST00000367573 RAD21O60216 631 aa13.63□□□□□ -0.23
CACNA1E-206ENST00000367573 TDRD9Q8NDG6 1382 aaKnown RBP13.63□□□□□ -0.23
CACNA1E-206ENST00000367573 EEA1Q15075 1411 aa13.63□□□□□ -0.23
CACNA1E-206ENST00000367573 TOMM22Q9NS69 142 aa13.62□□□□□ -0.23
CACNA1E-206ENST00000367573 STK31Q9BXU1 1019 aa13.62□□□□□ -0.23
CACNA1E-206ENST00000367573 SLC4A10Q6U841 1118 aa13.62□□□□□ -0.23
CACNA1E-206ENST00000367573 CEP164Q9UPV0 1460 aa13.62□□□□□ -0.23
CACNA1E-206ENST00000367573 NGEFQ8N5V2 710 aa13.61□□□□□ -0.23
CACNA1E-206ENST00000367573 DCAF1Q9Y4B6 1507 aa13.61□□□□□ -0.23
CACNA1E-206ENST00000367573 ANP32EQ9BTT0 268 aa13.6□□□□□ -0.23
CACNA1E-206ENST00000367573 FHAD1B1AJZ9 1412 aa13.6□□□□□ -0.23
CACNA1E-206ENST00000367573 CWC22Q9HCG8 908 aaKnown RBP13.6□□□□□ -0.23
CACNA1E-206ENST00000367573 ROCK2O75116 1388 aaKnown RBP13.6□□□□□ -0.23
CACNA1E-206ENST00000367573 B4GALNT3Q6L9W6 998 aa13.6□□□□□ -0.23
CACNA1E-206ENST00000367573 SOGA1O94964 1423 aa13.59□□□□□ -0.23
CACNA1E-206ENST00000367573 DRC7Q8IY82 874 aa13.59□□□□□ -0.23
CACNA1E-206ENST00000367573 ERICH6BQ5W0A0 696 aa13.59□□□□□ -0.23
CACNA1E-206ENST00000367573 PPP1R1BQ9UD71 204 aaPredicted RBP13.58□□□□□ -0.23
CACNA1E-206ENST00000367573 NRDCO43847 1150 aa13.58□□□□□ -0.24
CACNA1E-206ENST00000367573 HSP90B1P14625 803 aaKnown RBP13.58□□□□□ -0.24
CACNA1E-206ENST00000367573 ITPRIPQ8IWB1 547 aa13.58□□□□□ -0.24
CACNA1E-206ENST00000367573 KIAA2012Q0VF49 1180 aa13.58□□□□□ -0.24
CACNA1E-206ENST00000367573 GLIPR1L2Q4G1C9 344 aa13.58□□□□□ -0.24
CACNA1E-206ENST00000367573 TRIM34Q9BYJ4 488 aa13.58□□□□□ -0.24
CACNA1E-206ENST00000367573 MARCH6O60337 910 aa13.58□□□□□ -0.24
CACNA1E-206ENST00000367573 RASSF8Q8NHQ8 419 aa13.58□□□□□ -0.24
CACNA1E-206ENST00000367573 CALD1Q05682 793 aaKnown RBP13.57□□□□□ -0.24
CACNA1E-206ENST00000367573 CTDP1Q9Y5B0 961 aaPredicted RBP13.57□□□□□ -0.24
CACNA1E-206ENST00000367573 TERF2IPQ9NYB0 399 aa13.57□□□□□ -0.24
CACNA1E-206ENST00000367573 NUP155O75694 1391 aa13.57□□□□□ -0.24
CACNA1E-206ENST00000367573 OSCARQ8IYS5 282 aa13.57□□□□□ -0.24
CACNA1E-206ENST00000367573 C1orf141Q5JVX7 400 aa13.56□□□□□ -0.24
CACNA1E-206ENST00000367573 GPATCH3Q96I76 525 aa13.56□□□□□ -0.24
CACNA1E-206ENST00000367573 TRIM6-TRIM34B2RNG4 842 aa13.56□□□□□ -0.24
CACNA1E-206ENST00000367573 IPO8O15397 1037 aaKnown RBP13.55□□□□□ -0.24
CACNA1E-206ENST00000367573 HSCBQ8IWL3 235 aa13.55□□□□□ -0.24
CACNA1E-206ENST00000367573 TRAK1Q9UPV9 953 aa13.55□□□□□ -0.24
CACNA1E-206ENST00000367573 CREBRFQ8IUR6 639 aa13.55□□□□□ -0.24
CACNA1E-206ENST00000367573 WWC1Q8IX03 1113 aa13.55□□□□□ -0.24
CACNA1E-206ENST00000367573 FAM69CQ0P6D2 419 aa13.54□□□□□ -0.24
CACNA1E-206ENST00000367573 CNKSR2Q8WXI2 1034 aa13.54□□□□□ -0.24
CACNA1E-206ENST00000367573 PSME1Q06323 249 aa13.54□□□□□ -0.24
CACNA1E-206ENST00000367573 SAMD1Q6SPF0 538 aaPredicted RBP13.53□□□□□ -0.24
CACNA1E-206ENST00000367573 NOC3LQ8WTT2 800 aaKnown RBP13.52□□□□□ -0.24
CACNA1E-206ENST00000367573 ARHGAP35Q9NRY4 1499 aa13.52□□□□□ -0.25
CACNA1E-206ENST00000367573 CHAF1AQ13111 956 aaPredicted RBP13.52□□□□□ -0.25
CACNA1E-206ENST00000367573 ATF3P18847 181 aa13.52□□□□□ -0.25
CACNA1E-206ENST00000367573 TCEAL9Q9UHQ7 104 aa13.51□□□□□ -0.25
CACNA1E-206ENST00000367573 EIF3AQ14152 1382 aaKnown RBP13.51□□□□□ -0.25
CACNA1E-206ENST00000367573 KTN1Q86UP2 1357 aaKnown RBP13.51□□□□□ -0.25
CACNA1E-206ENST00000367573 SF3B2Q13435 895 aaKnown RBP13.5□□□□□ -0.25
CACNA1E-206ENST00000367573 CHMP4AQ9BY43 222 aa13.5□□□□□ -0.25
CACNA1E-206ENST00000367573 BAZ1AQ9NRL2 1556 aaPredicted RBP13.49□□□□□ -0.25
CACNA1E-206ENST00000367573 TTC5Q8N0Z6 440 aa13.49□□□□□ -0.25
CACNA1E-206ENST00000367573 NOL10Q9BSC4 688 aaKnown RBP13.49□□□□□ -0.25
CACNA1E-206ENST00000367573 CCDC146Q8IYE0 955 aa13.49□□□□□ -0.25
CACNA1E-206ENST00000367573 ANKRD30AQ9BXX3 1397 aa13.49□□□□□ -0.25
CACNA1E-206ENST00000367573 JPH4Q96JJ6 628 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms