RNA–Protein interactions for RNA: ENST00000367538.1

SMG7-203, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG7, Length 328 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-203ENST00000367538 ARHGAP35Q9NRY4 1499 aa30.73■■■□□ 2.51
SMG7-203ENST00000367538 EFCAB2Q5VUJ9 269 aa30.72■■■□□ 2.51
SMG7-203ENST00000367538 MYO5CQ9NQX4 1742 aa30.72■■■□□ 2.51
SMG7-203ENST00000367538 SIGLEC1Q9BZZ2 1709 aa30.71■■■□□ 2.51
SMG7-203ENST00000367538 KIF14Q15058 1648 aa30.68■■■□□ 2.5
SMG7-203ENST00000367538 ATP10AO60312 1499 aa30.68■■■□□ 2.5
SMG7-203ENST00000367538 ATP1B4Q9UN42 357 aaPredicted RBP30.67■■■□□ 2.5
SMG7-203ENST00000367538 TROQ12816 1431 aaPredicted RBP30.66■■■□□ 2.5
SMG7-203ENST00000367538 C9orf84Q5VXU9 1444 aa30.66■■■□□ 2.5
SMG7-203ENST00000367538 FER1L4A9Z1Z3 1794 aa30.66■■■□□ 2.5
SMG7-203ENST00000367538 CLIP1P30622 1438 aa30.64■■■□□ 2.49
SMG7-203ENST00000367538 ZNF518AQ6AHZ1 1483 aa30.63■■■□□ 2.49
SMG7-203ENST00000367538 ARHGEF12Q9NZN5 1544 aa30.62■■■□□ 2.49
SMG7-203ENST00000367538 MLECQ14165 292 aa30.6■■■□□ 2.49
SMG7-203ENST00000367538 ARHGAP5Q13017 1502 aa30.58■■■□□ 2.49
SMG7-203ENST00000367538 KDM5CP41229 1560 aa30.58■■■□□ 2.49
SMG7-203ENST00000367538 HSPA2P54652 639 aa30.57■■■□□ 2.48
SMG7-203ENST00000367538 EHMT2Q96KQ7 1210 aa30.57■■■□□ 2.48
SMG7-203ENST00000367538 CHIC1Q5VXU3 224 aa30.55■■■□□ 2.48
SMG7-203ENST00000367538 PLPPR3Q6T4P5 718 aa30.55■■■□□ 2.48
SMG7-203ENST00000367538 CCDC18Q5T9S5 1454 aa30.5■■■□□ 2.47
SMG7-203ENST00000367538 REREQ9P2R6 1566 aa30.49■■■□□ 2.47
SMG7-203ENST00000367538 LRRIQ1Q96JM4 1722 aa30.49■■■□□ 2.47
SMG7-203ENST00000367538 AFAP1Q8N556 730 aa30.48■■■□□ 2.47
SMG7-203ENST00000367538 PREX1Q8TCU6 1659 aa30.48■■■□□ 2.47
SMG7-203ENST00000367538 CASKIN1Q8WXD9 1431 aa30.47■■■□□ 2.47
SMG7-203ENST00000367538 MLH3Q9UHC1 1453 aa30.46■■■□□ 2.47
SMG7-203ENST00000367538 DIP2CQ9Y2E4 1556 aa30.45■■■□□ 2.46
SMG7-203ENST00000367538 CDC42BPBQ9Y5S2 1711 aa30.44■■■□□ 2.46
SMG7-203ENST00000367538 PREX2Q70Z35 1606 aa30.44■■■□□ 2.46
SMG7-203ENST00000367538 ABCC1P33527 1531 aa30.41■■■□□ 2.46
SMG7-203ENST00000367538 MYT1LQ9UL68 1186 aa30.4■■■□□ 2.46
SMG7-203ENST00000367538 AGLP35573 1532 aa30.38■■■□□ 2.45
SMG7-203ENST00000367538 SETD1BQ9UPS6 1966 aaKnown RBP30.38■■■□□ 2.45
SMG7-203ENST00000367538 ABCA6Q8N139 1617 aa30.37■■■□□ 2.45
SMG7-203ENST00000367538 CERKQ8TCT0 537 aa30.37■■■□□ 2.45
SMG7-203ENST00000367538 UHRF1BP1Q6BDS2 1440 aa30.37■■■□□ 2.45
SMG7-203ENST00000367538 CEBPAP49715 358 aaPredicted RBP30.36■■■□□ 2.45
SMG7-203ENST00000367538 FYCO1Q9BQS8 1478 aa30.35■■■□□ 2.45
SMG7-203ENST00000367538 ITSN2Q9NZM3 1697 aa30.34■■■□□ 2.45
SMG7-203ENST00000367538 TRAPPC8Q9Y2L5 1435 aa30.34■■■□□ 2.45
SMG7-203ENST00000367538 DMRT2Q9Y5R5 561 aa30.34■■■□□ 2.45
SMG7-203ENST00000367538 CDC42BPAQ5VT25 1732 aa30.28■■■□□ 2.44
SMG7-203ENST00000367538 ESF1Q9H501 851 aaKnown RBP30.28■■■□□ 2.44
SMG7-203ENST00000367538 CNTLNQ9NXG0 1405 aa30.27■■■□□ 2.44
SMG7-203ENST00000367538 C3P01024 1663 aa30.26■■■□□ 2.43
SMG7-203ENST00000367538 KIDINS220Q9ULH0 1771 aa30.26■■■□□ 2.43
SMG7-203ENST00000367538 STRCQ7RTU9 1775 aa30.25■■■□□ 2.43
SMG7-203ENST00000367538 SAMD9LQ8IVG5 1584 aa30.2■■■□□ 2.43
SMG7-203ENST00000367538 PTPRTO14522 1441 aa30.19■■■□□ 2.42
SMG7-203ENST00000367538 GPATCH8Q9UKJ3 1502 aaKnown RBP30.17■■■□□ 2.42
SMG7-203ENST00000367538 PLEKHH2Q8IVE3 1493 aa30.16■■■□□ 2.42
SMG7-203ENST00000367538 SYCP2Q9BX26 1530 aa30.16■■■□□ 2.42
SMG7-203ENST00000367538 KIAA1107Q9UPP5 1409 aa30.15■■■□□ 2.42
SMG7-203ENST00000367538 SPAG9O60271 1321 aaKnown RBP30.14■■■□□ 2.42
SMG7-203ENST00000367538 MROH2AA6NES4 1674 aa30.14■■■□□ 2.41
SMG7-203ENST00000367538 ZNF777Q9ULD5 760 aaPredicted RBP30.13■■■□□ 2.41
SMG7-203ENST00000367538 NPATQ14207 1427 aa30.13■■■□□ 2.41
SMG7-203ENST00000367538 ATP7AQ04656 1500 aa30.08■■■□□ 2.41
SMG7-203ENST00000367538 NCOA1Q15788 1441 aa30.07■■■□□ 2.4
SMG7-203ENST00000367538 CCNB3Q8WWL7 1395 aa30.07■■■□□ 2.4
SMG7-203ENST00000367538 CFDP1Q9UEE9 299 aaPredicted RBP30.07■■■□□ 2.4
SMG7-203ENST00000367538 HNRNPMP52272 730 aaKnown RBP eCLIP30.06■■■□□ 2.42e-6■□□□□ 8.9
SMG7-203ENST00000367538 INO80Q9ULG1 1556 aaPredicted RBP30.06■■■□□ 2.4
SMG7-203ENST00000367538 PLXNC1O60486 1568 aa30.05■■■□□ 2.4
SMG7-203ENST00000367538 ZMYM3Q14202 1370 aa30.03■■■□□ 2.4
SMG7-203ENST00000367538 MTUS2Q5JR59 1369 aa30.03■■■□□ 2.4
SMG7-203ENST00000367538 A2MP01023 1474 aa30.02■■■□□ 2.4
SMG7-203ENST00000367538 SUPT6HQ7KZ85 1726 aaKnown RBP30.02■■■□□ 2.4
SMG7-203ENST00000367538 IQSEC2Q5JU85 1478 aa30■■■□□ 2.39
SMG7-203ENST00000367538 LTBP4Q8N2S1 1624 aa29.97■■■□□ 2.39
SMG7-203ENST00000367538 PPP6R1Q9UPN7 881 aa29.97■■■□□ 2.39
SMG7-203ENST00000367538 CAMSAP1Q5T5Y3 1602 aa29.96■■■□□ 2.39
SMG7-203ENST00000367538 EHBP1L1Q8N3D4 1523 aa29.94■■■□□ 2.38
SMG7-203ENST00000367538 CLTCQ00610 1675 aaKnown RBP29.94■■■□□ 2.38
SMG7-203ENST00000367538 ADGBQ8N7X0 1667 aa29.94■■■□□ 2.38
SMG7-203ENST00000367538 ZNF142P52746 1687 aaPredicted RBP29.92■■■□□ 2.38
SMG7-203ENST00000367538 TIAM1Q13009 1591 aa29.92■■■□□ 2.38
SMG7-203ENST00000367538 PLA2R1Q13018 1463 aa29.91■■■□□ 2.38
SMG7-203ENST00000367538 MYO3AQ8NEV4 1616 aa29.89■■■□□ 2.38
SMG7-203ENST00000367538 RTEL1-TNFRSF6BF6WH68 1400 aa29.89■■■□□ 2.38
SMG7-203ENST00000367538 PTPRKQ15262 1439 aa29.89■■■□□ 2.38
SMG7-203ENST00000367538 CEP162Q5TB80 1403 aa29.89■■■□□ 2.38
SMG7-203ENST00000367538 MBD5Q9P267 1494 aa29.88■■■□□ 2.37
SMG7-203ENST00000367538 PKD2Q13563 968 aa29.87■■■□□ 2.37
SMG7-203ENST00000367538 GGT6Q6P531 493 aa29.87■■■□□ 2.37
SMG7-203ENST00000367538 CEP170BQ9Y4F5 1589 aaPredicted RBP29.86■■■□□ 2.37
SMG7-203ENST00000367538 TCOF1Q13428 1488 aaKnown RBP29.82■■■□□ 2.36
SMG7-203ENST00000367538 DISP3Q9P2K9 1392 aa29.82■■■□□ 2.36
SMG7-203ENST00000367538 ZNF644Q9H582 1327 aaPredicted RBP29.82■■■□□ 2.36
SMG7-203ENST00000367538 DHX29Q7Z478 1369 aaKnown RBP29.81■■■□□ 2.36
SMG7-203ENST00000367538 NCKAP5LQ9HCH0 1330 aa29.8■■■□□ 2.36
SMG7-203ENST00000367538 FAM135AQ9P2D6 1515 aa29.8■■■□□ 2.36
SMG7-203ENST00000367538 RSPH4AQ5TD94 716 aa29.77■■■□□ 2.36
SMG7-203ENST00000367538 A2ML1A8K2U0 1454 aa29.76■■■□□ 2.35
SMG7-203ENST00000367538 CCDC141Q6ZP82 1450 aa29.76■■■□□ 2.35
SMG7-203ENST00000367538 ZNF335Q9H4Z2 1342 aaPredicted RBP29.73■■■□□ 2.35
SMG7-203ENST00000367538 NCOA2Q15596 1464 aa29.72■■■□□ 2.35
SMG7-203ENST00000367538 SPATA31D1Q6ZQQ2 1576 aa29.71■■■□□ 2.35
SMG7-203ENST00000367538 CAMSAP2Q08AD1 1489 aa29.7■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms