RNA–Protein interactions for RNA: ENST00000367512.7

EDEM3-202, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EDEM3, Length 6,678 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-202ENST00000367512 CHMP4BQ9H444 224 aaKnown RBP16.94■□□□□ 0.3
EDEM3-202ENST00000367512 MFAP1P55081 439 aaKnown RBP16.94■□□□□ 0.3
EDEM3-202ENST00000367512 MS4A1P11836 297 aa16.93■□□□□ 0.3
EDEM3-202ENST00000367512 KIAA1211Q6ZU35 1233 aa16.92■□□□□ 0.3
EDEM3-202ENST00000367512 ZNF330Q9Y3S2 320 aaPredicted RBP16.89■□□□□ 0.3
EDEM3-202ENST00000367512 SAFB2Q14151 953 aaKnown RBP eCLIP16.88■□□□□ 0.29
EDEM3-202ENST00000367512 PTMSP20962 102 aa16.88■□□□□ 0.29
EDEM3-202ENST00000367512 WWC1Q8IX03 1113 aa16.88■□□□□ 0.29
EDEM3-202ENST00000367512 CCAR2Q8N163 923 aaKnown RBP16.87■□□□□ 0.29
EDEM3-202ENST00000367512 ITPRIPQ8IWB1 547 aa16.87■□□□□ 0.29
EDEM3-202ENST00000367512 TPM4P67936 248 aa16.86■□□□□ 0.29
EDEM3-202ENST00000367512 TIMELESSQ9UNS1 1208 aa16.86■□□□□ 0.29
EDEM3-202ENST00000367512 SYAP1Q96A49 352 aaPredicted RBP16.85■□□□□ 0.29
EDEM3-202ENST00000367512 RASSF8Q8NHQ8 419 aa16.84■□□□□ 0.29
EDEM3-202ENST00000367512 FOXD4L6Q3SYB3 417 aaPredicted RBP16.84■□□□□ 0.29
EDEM3-202ENST00000367512 FOXD4L3Q6VB84 417 aaPredicted RBP16.84■□□□□ 0.29
EDEM3-202ENST00000367512 CALD1Q05682 793 aaKnown RBP16.83■□□□□ 0.29
EDEM3-202ENST00000367512 SETQ01105 290 aaPredicted RBP16.83■□□□□ 0.28
EDEM3-202ENST00000367512 ZNF771Q7L3S4 317 aaPredicted RBP16.82■□□□□ 0.28
EDEM3-202ENST00000367512 PES1O00541 588 aaKnown RBP16.82■□□□□ 0.28
EDEM3-202ENST00000367512 TRIM6-TRIM34B2RNG4 842 aa16.81■□□□□ 0.28
EDEM3-202ENST00000367512 SLC4A3P48751 1232 aa16.81■□□□□ 0.28
EDEM3-202ENST00000367512 TSHZ2Q9NRE2 1034 aa16.81■□□□□ 0.28
EDEM3-202ENST00000367512 CALRP27797 417 aaKnown RBP16.79■□□□□ 0.28
EDEM3-202ENST00000367512 CHMP7Q8WUX9 453 aaPredicted RBP16.79■□□□□ 0.28
EDEM3-202ENST00000367512 MORC1Q86VD1 984 aa16.79■□□□□ 0.28
EDEM3-202ENST00000367512 BCL11BQ9C0K0 894 aaPredicted RBP16.79■□□□□ 0.28
EDEM3-202ENST00000367512 HTATSF1O43719 755 aaKnown RBP16.79■□□□□ 0.28
EDEM3-202ENST00000367512 CLIP1P30622 1438 aa16.78■□□□□ 0.28
EDEM3-202ENST00000367512 TPM3P06753 285 aa16.78■□□□□ 0.28
EDEM3-202ENST00000367512 RTF1Q92541 710 aaKnown RBP16.78■□□□□ 0.28
EDEM3-202ENST00000367512 CHMP3Q9Y3E7 222 aa16.78■□□□□ 0.28
EDEM3-202ENST00000367512 ZNF592Q92610 1267 aa16.78■□□□□ 0.28
EDEM3-202ENST00000367512 SRPK2P78362 688 aaKnown RBP16.77■□□□□ 0.28
EDEM3-202ENST00000367512 IPO9Q96P70 1041 aaKnown RBP16.77■□□□□ 0.28
EDEM3-202ENST00000367512 DCAF11Q8TEB1 546 aa16.76■□□□□ 0.27
EDEM3-202ENST00000367512 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.76■□□□□ 0.27
EDEM3-202ENST00000367512 CEP89Q96ST8 783 aa16.75■□□□□ 0.27
EDEM3-202ENST00000367512 RCAN3Q9UKA8 241 aa16.75■□□□□ 0.27
EDEM3-202ENST00000367512 TAF7LQ5H9L4 462 aa16.75■□□□□ 0.27
EDEM3-202ENST00000367512 CLUAP1Q96AJ1 413 aa16.74■□□□□ 0.27
EDEM3-202ENST00000367512 RWDD1Q9H446 243 aaPredicted RBP16.74■□□□□ 0.27
EDEM3-202ENST00000367512 VPS53Q5VIR6 699 aa16.73■□□□□ 0.27
EDEM3-202ENST00000367512 TMF1P82094 1093 aa16.73■□□□□ 0.27
EDEM3-202ENST00000367512 GORABQ5T7V8 394 aa16.73■□□□□ 0.27
EDEM3-202ENST00000367512 CFDP1Q9UEE9 299 aaPredicted RBP16.73■□□□□ 0.27
EDEM3-202ENST00000367512 PLEKHD1A6NEE1 506 aa16.73■□□□□ 0.27
EDEM3-202ENST00000367512 ZCCHC6Q5VYS8 1495 aaKnown RBP16.72■□□□□ 0.27
EDEM3-202ENST00000367512 CCDC9Q9Y3X0 531 aaKnown RBP16.72■□□□□ 0.27
EDEM3-202ENST00000367512 TOMM22Q9NS69 142 aa16.72■□□□□ 0.27
EDEM3-202ENST00000367512 TRHP20396 242 aaPredicted RBP16.72■□□□□ 0.27
EDEM3-202ENST00000367512 TCERG1O14776 1098 aaKnown RBP16.71■□□□□ 0.27
EDEM3-202ENST00000367512 FAM13BQ9NYF5 915 aa16.71■□□□□ 0.27
EDEM3-202ENST00000367512 CFAP44Q96MT7 982 aa16.7■□□□□ 0.26
EDEM3-202ENST00000367512 RSPH6AQ9H0K4 717 aa16.7■□□□□ 0.26
EDEM3-202ENST00000367512 IPO8O15397 1037 aaKnown RBP16.7■□□□□ 0.26
EDEM3-202ENST00000367512 STK26Q9P289 416 aa16.7■□□□□ 0.26
EDEM3-202ENST00000367512 SLC4A10Q6U841 1118 aa16.69■□□□□ 0.26
EDEM3-202ENST00000367512 SF3A1Q15459 793 aaKnown RBP16.69■□□□□ 0.26
EDEM3-202ENST00000367512 U2AF1L5P0DN76 240 aaPredicted RBP16.68■□□□□ 0.26
EDEM3-202ENST00000367512 U2AF1Q01081 240 aaKnown RBP eCLIP16.68■□□□□ 0.26
EDEM3-202ENST00000367512 TPD52L1Q16890 204 aaPredicted RBP16.68■□□□□ 0.26
EDEM3-202ENST00000367512 MARCH6O60337 910 aa16.66■□□□□ 0.26
EDEM3-202ENST00000367512 HSPA5P11021 654 aaKnown RBP16.66■□□□□ 0.26
EDEM3-202ENST00000367512 PAK3O75914 559 aaPredicted RBP16.66■□□□□ 0.26
EDEM3-202ENST00000367512 CCDC146Q8IYE0 955 aa16.66■□□□□ 0.26
EDEM3-202ENST00000367512 KRI1Q8N9T8 703 aaKnown RBP16.65■□□□□ 0.26
EDEM3-202ENST00000367512 MLECQ14165 292 aa16.65■□□□□ 0.26
EDEM3-202ENST00000367512 CSPP1Q1MSJ5 1256 aa16.65■□□□□ 0.26
EDEM3-202ENST00000367512 SMC4Q9NTJ3 1288 aa16.64■□□□□ 0.26
EDEM3-202ENST00000367512 DDX49Q9Y6V7 483 aaKnown RBP16.64■□□□□ 0.26
EDEM3-202ENST00000367512 CCDC34Q96HJ3 373 aa16.64■□□□□ 0.25
EDEM3-202ENST00000367512 PHF14O94880 888 aa16.63■□□□□ 0.25
EDEM3-202ENST00000367512 SCRIBQ14160 1630 aa16.63■□□□□ 0.25
EDEM3-202ENST00000367512 FBXW7Q969H0 707 aa16.62■□□□□ 0.25
EDEM3-202ENST00000367512 KIF16BQ96L93 1317 aa16.62■□□□□ 0.25
EDEM3-202ENST00000367512 PMFBP1Q8TBY8 1022 aa16.62■□□□□ 0.25
EDEM3-202ENST00000367512 GOLGA6L19H0YKK7 550 aa16.61■□□□□ 0.25
EDEM3-202ENST00000367512 FOXD1Q16676 465 aa16.61■□□□□ 0.25
EDEM3-202ENST00000367512 H3BQV1 296 aa16.61■□□□□ 0.25
EDEM3-202ENST00000367512 IFFO2Q5TF58 517 aa16.61■□□□□ 0.25
EDEM3-202ENST00000367512 USP35Q9P2H5 1018 aa16.61■□□□□ 0.25
EDEM3-202ENST00000367512 CSB-PGBD3P0DP91 1061 aa16.61■□□□□ 0.25
EDEM3-202ENST00000367512 GSE1Q14687 1217 aa16.6■□□□□ 0.25
EDEM3-202ENST00000367512 BECN2A8MW95 431 aa16.6■□□□□ 0.25
EDEM3-202ENST00000367512 RSF1Q96T23 1441 aaPredicted RBP16.6■□□□□ 0.25
EDEM3-202ENST00000367512 TSR1Q2NL82 804 aaKnown RBP16.6■□□□□ 0.25
EDEM3-202ENST00000367512 GPATCH3Q96I76 525 aa16.6■□□□□ 0.25
EDEM3-202ENST00000367512 KTN1Q86UP2 1357 aaKnown RBP16.58■□□□□ 0.25
EDEM3-202ENST00000367512 CCER2I3L3R5 266 aa16.58■□□□□ 0.25
EDEM3-202ENST00000367512 MYO15BQ96JP2 1530 aa16.58■□□□□ 0.25
EDEM3-202ENST00000367512 CEP162Q5TB80 1403 aa16.58■□□□□ 0.25
EDEM3-202ENST00000367512 ST18O60284 1047 aa16.58■□□□□ 0.25
EDEM3-202ENST00000367512 RILPL2Q969X0 211 aa16.58■□□□□ 0.25
EDEM3-202ENST00000367512 PCMTD1Q96MG8 357 aaPredicted RBP16.58■□□□□ 0.25
EDEM3-202ENST00000367512 GPS2Q13227 327 aa16.58■□□□□ 0.24
EDEM3-202ENST00000367512 DDX11L8A8MPP1 907 aa16.57■□□□□ 0.24
EDEM3-202ENST00000367512 RRP12Q5JTH9 1297 aaKnown RBP16.57■□□□□ 0.24
EDEM3-202ENST00000367512 MCTP1Q6DN14 999 aa16.57■□□□□ 0.24
EDEM3-202ENST00000367512 STK31Q9BXU1 1019 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms