RNA–Protein interactions for RNA: ENST00000366889.6

PACRG-203, Transcript of parkin coregulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACRG, Length 1,503 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-203ENST00000366889 TEX14Q8IWB6 1497 aa13.41□□□□□ -0.26
PACRG-203ENST00000366889 PTPRGP23470 1445 aa13.41□□□□□ -0.26
PACRG-203ENST00000366889 P3H3Q8IVL6 736 aa13.4□□□□□ -0.26
PACRG-203ENST00000366889 FHOD3Q2V2M9 1422 aa13.4□□□□□ -0.26
PACRG-203ENST00000366889 PCF11O94913 1555 aaKnown RBP13.38□□□□□ -0.27
PACRG-203ENST00000366889 ZCCHC11Q5TAX3 1644 aaKnown RBP13.38□□□□□ -0.27
PACRG-203ENST00000366889 ADAMTSL3P82987 1691 aa13.37□□□□□ -0.27
PACRG-203ENST00000366889 MKRN4PQ13434 485 aaPredicted RBP13.37□□□□□ -0.27
PACRG-203ENST00000366889 SPATA31D1Q6ZQQ2 1576 aa13.37□□□□□ -0.27
PACRG-203ENST00000366889 PTPRMP28827 1452 aa13.36□□□□□ -0.27
PACRG-203ENST00000366889 FMN1Q68DA7 1419 aa13.36□□□□□ -0.27
PACRG-203ENST00000366889 UHRF1BP1LA0JNW5 1464 aa13.33□□□□□ -0.27
PACRG-203ENST00000366889 CASKIN1Q8WXD9 1431 aa13.33□□□□□ -0.28
PACRG-203ENST00000366889 FYCO1Q9BQS8 1478 aa13.32□□□□□ -0.28
PACRG-203ENST00000366889 UACAQ9BZF9 1416 aa13.32□□□□□ -0.28
PACRG-203ENST00000366889 MADDQ8WXG6 1647 aa13.31□□□□□ -0.28
PACRG-203ENST00000366889 MAP3K1Q13233 1512 aa13.31□□□□□ -0.28
PACRG-203ENST00000366889 KDM5BQ9UGL1 1544 aa13.31□□□□□ -0.28
PACRG-203ENST00000366889 ABCA8O94911 1581 aa13.29□□□□□ -0.28
PACRG-203ENST00000366889 CFAP43Q8NDM7 1665 aa13.28□□□□□ -0.28
PACRG-203ENST00000366889 BCORL1Q5H9F3 1711 aa13.27□□□□□ -0.28
PACRG-203ENST00000366889 PPARGC1BQ86YN6 1023 aaKnown RBP13.26□□□□□ -0.29
PACRG-203ENST00000366889 CERKQ8TCT0 537 aa13.26□□□□□ -0.29
PACRG-203ENST00000366889 TIAM1Q13009 1591 aa13.26□□□□□ -0.29
PACRG-203ENST00000366889 WDR7Q9Y4E6 1490 aa13.25□□□□□ -0.29
PACRG-203ENST00000366889 ARID3CA6NKF2 412 aa13.25□□□□□ -0.29
PACRG-203ENST00000366889 TRIM26Q12899 539 aaPredicted RBP13.25□□□□□ -0.29
PACRG-203ENST00000366889 RIMS1Q86UR5 1692 aaKnown RBP13.25□□□□□ -0.29
PACRG-203ENST00000366889 HSPA2P54652 639 aa13.24□□□□□ -0.29
PACRG-203ENST00000366889 MAGI3Q5TCQ9 1506 aa13.24□□□□□ -0.29
PACRG-203ENST00000366889 HECW1Q76N89 1606 aa13.22□□□□□ -0.29
PACRG-203ENST00000366889 RAPGEF6Q8TEU7 1601 aa13.22□□□□□ -0.29
PACRG-203ENST00000366889 KANK4Q5T7N3 995 aaPredicted RBP13.22□□□□□ -0.29
PACRG-203ENST00000366889 CD109Q6YHK3 1445 aa13.21□□□□□ -0.29
PACRG-203ENST00000366889 LRRC9Q6ZRR7 1453 aa13.2□□□□□ -0.3
PACRG-203ENST00000366889 RBM42Q9BTD8 480 aaKnown RBP13.2□□□□□ -0.3
PACRG-203ENST00000366889 LRRIQ1Q96JM4 1722 aa13.2□□□□□ -0.3
PACRG-203ENST00000366889 CCDC18Q5T9S5 1454 aa13.2□□□□□ -0.3
PACRG-203ENST00000366889 ATP1B4Q9UN42 357 aaPredicted RBP13.19□□□□□ -0.3
PACRG-203ENST00000366889 NUP153P49790 1475 aaKnown RBP13.19□□□□□ -0.3
PACRG-203ENST00000366889 ATP10BO94823 1461 aa13.18□□□□□ -0.3
PACRG-203ENST00000366889 PCGF6Q9BYE7 350 aa13.16□□□□□ -0.3
PACRG-203ENST00000366889 FRMPD1Q5SYB0 1578 aa13.16□□□□□ -0.3
PACRG-203ENST00000366889 ARAP3Q8WWN8 1544 aa13.16□□□□□ -0.3
PACRG-203ENST00000366889 CDK13Q14004 1512 aaKnown RBP13.13□□□□□ -0.31
PACRG-203ENST00000366889 SIGLEC1Q9BZZ2 1709 aa13.13□□□□□ -0.31
PACRG-203ENST00000366889 KCNH8Q96L42 1107 aa13.12□□□□□ -0.31
PACRG-203ENST00000366889 EHBP1L1Q8N3D4 1523 aa13.11□□□□□ -0.31
PACRG-203ENST00000366889 MTUS2Q5JR59 1369 aa13.11□□□□□ -0.31
PACRG-203ENST00000366889 SPDYE2BA6NHP3 402 aa13.09□□□□□ -0.31
PACRG-203ENST00000366889 SPDYE6P0CI01 402 aa13.09□□□□□ -0.31
PACRG-203ENST00000366889 SPDYE2Q495Y8 402 aa13.09□□□□□ -0.31
PACRG-203ENST00000366889 STRCQ7RTU9 1775 aa13.09□□□□□ -0.31
PACRG-203ENST00000366889 ARHGEF40Q8TER5 1519 aa13.09□□□□□ -0.31
PACRG-203ENST00000366889 RRBP1Q9P2E9 1410 aaKnown RBP13.08□□□□□ -0.32
PACRG-203ENST00000366889 ARID4BQ4LE39 1312 aaPredicted RBP13.07□□□□□ -0.32
PACRG-203ENST00000366889 RAPGEF3O95398 923 aa13.07□□□□□ -0.32
PACRG-203ENST00000366889 CDK11AQ9UQ88 783 aaPredicted RBP13.07□□□□□ -0.32
PACRG-203ENST00000366889 PHLDB1Q86UU1 1377 aa13.06□□□□□ -0.32
PACRG-203ENST00000366889 SUPT6HQ7KZ85 1726 aaKnown RBP13.06□□□□□ -0.32
PACRG-203ENST00000366889 FER1L4A9Z1Z3 1794 aa13.06□□□□□ -0.32
PACRG-203ENST00000366889 NCOA2Q15596 1464 aa13.05□□□□□ -0.32
PACRG-203ENST00000366889 TROQ12816 1431 aaPredicted RBP13.05□□□□□ -0.32
PACRG-203ENST00000366889 PLEKHD1A6NEE1 506 aa13.04□□□□□ -0.32
PACRG-203ENST00000366889 ABCA9Q8IUA7 1624 aa13.04□□□□□ -0.32
PACRG-203ENST00000366889 PREX1Q8TCU6 1659 aa13.03□□□□□ -0.32
PACRG-203ENST00000366889 AKT1S1Q96B36 256 aa13.03□□□□□ -0.32
PACRG-203ENST00000366889 ZNF692Q9BU19 519 aaPredicted RBP13.03□□□□□ -0.32
PACRG-203ENST00000366889 RICTORQ6R327 1708 aa13.02□□□□□ -0.33
PACRG-203ENST00000366889 CCNB3Q8WWL7 1395 aa13.02□□□□□ -0.33
PACRG-203ENST00000366889 TTC37Q6PGP7 1564 aa13.02□□□□□ -0.33
PACRG-203ENST00000366889 MYOM3Q5VTT5 1437 aa13□□□□□ -0.33
PACRG-203ENST00000366889 SSUH2Q9Y2M2 353 aa13□□□□□ -0.33
PACRG-203ENST00000366889 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.99□□□□□ -0.33
PACRG-203ENST00000366889 KIF14Q15058 1648 aa12.99□□□□□ -0.33
PACRG-203ENST00000366889 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.99□□□□□ -0.33
PACRG-203ENST00000366889 FGD6Q6ZV73 1430 aa12.99□□□□□ -0.33
PACRG-203ENST00000366889 LTBP4Q8N2S1 1624 aa12.97□□□□□ -0.33
PACRG-203ENST00000366889 SPDYE4A6NLX3 237 aa12.97□□□□□ -0.33
PACRG-203ENST00000366889 NEO1Q92859 1461 aa12.97□□□□□ -0.33
PACRG-203ENST00000366889 MIA2Q96PC5 1412 aa12.96□□□□□ -0.34
PACRG-203ENST00000366889 YEATS2Q9ULM3 1422 aa12.96□□□□□ -0.34
PACRG-203ENST00000366889 FANCAO15360 1455 aa12.94□□□□□ -0.34
PACRG-203ENST00000366889 TCOF1Q13428 1488 aaKnown RBP12.94□□□□□ -0.34
PACRG-203ENST00000366889 REM2Q8IYK8 340 aaPredicted RBP12.93□□□□□ -0.34
PACRG-203ENST00000366889 MED1Q15648 1581 aaPredicted RBP12.92□□□□□ -0.34
PACRG-203ENST00000366889 GPATCH8Q9UKJ3 1502 aaKnown RBP12.92□□□□□ -0.34
PACRG-203ENST00000366889 PTPN23Q9H3S7 1636 aa12.92□□□□□ -0.34
PACRG-203ENST00000366889 MLECQ14165 292 aa12.91□□□□□ -0.34
PACRG-203ENST00000366889 ITSN2Q9NZM3 1697 aa12.91□□□□□ -0.34
PACRG-203ENST00000366889 ZFYVE16Q7Z3T8 1539 aa12.9□□□□□ -0.34
PACRG-203ENST00000366889 FAM50AQ14320 339 aaKnown RBP12.9□□□□□ -0.34
PACRG-203ENST00000366889 MYO5CQ9NQX4 1742 aa12.9□□□□□ -0.34
PACRG-203ENST00000366889 ZMYM4Q5VZL5 1548 aa12.9□□□□□ -0.34
PACRG-203ENST00000366889 ARHGEF12Q9NZN5 1544 aa12.89□□□□□ -0.35
PACRG-203ENST00000366889 POGZQ7Z3K3 1410 aa12.89□□□□□ -0.35
PACRG-203ENST00000366889 PLCH2O75038 1416 aa12.88□□□□□ -0.35
PACRG-203ENST00000366889 AKNAQ7Z591 1439 aa12.88□□□□□ -0.35
PACRG-203ENST00000366889 DENND4BO75064 1496 aaPredicted RBP12.88□□□□□ -0.35
PACRG-203ENST00000366889 IQSEC2Q5JU85 1478 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms