RNA–Protein interactions for RNA: ENST00000361720.9

GPATCH3-201, Transcript of G-patch domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPATCH3, Length 2,123 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH3-201ENST00000361720 MAPKBP1O60336 1514 aa27.63■■■□□ 2.01
GPATCH3-201ENST00000361720 MYO5CQ9NQX4 1742 aa27.63■■■□□ 2.01
GPATCH3-201ENST00000361720 ZNF777Q9ULD5 760 aaPredicted RBP27.62■■■□□ 2.01
GPATCH3-201ENST00000361720 DNAJC5Q9H3Z4 198 aa27.6■■■□□ 2.01
GPATCH3-201ENST00000361720 ABCA9Q8IUA7 1624 aa27.59■■■□□ 2.01
GPATCH3-201ENST00000361720 CAMSAP2Q08AD1 1489 aa27.59■■■□□ 2.01
GPATCH3-201ENST00000361720 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.57■■■□□ 2
GPATCH3-201ENST00000361720 PTPRKQ15262 1439 aa27.56■■■□□ 2
GPATCH3-201ENST00000361720 ARHGAP5Q13017 1502 aa27.56■■■□□ 2
GPATCH3-201ENST00000361720 SAMD9LQ8IVG5 1584 aa27.54■■■□□ 2
GPATCH3-201ENST00000361720 PLCH2O75038 1416 aa27.52■■■□□ 2
GPATCH3-201ENST00000361720 DIEXFQ68CQ4 756 aaKnown RBP27.5■■□□□ 1.99
GPATCH3-201ENST00000361720 SCAF1Q9H7N4 1312 aaKnown RBP27.46■■□□□ 1.99
GPATCH3-201ENST00000361720 DNMT1P26358 1616 aaKnown RBP27.46■■□□□ 1.99
GPATCH3-201ENST00000361720 DIP2BQ9P265 1576 aa27.46■■□□□ 1.99
GPATCH3-201ENST00000361720 ABCC5O15440 1437 aa27.45■■□□□ 1.98
GPATCH3-201ENST00000361720 DAPK1P53355 1430 aa27.44■■□□□ 1.98
GPATCH3-201ENST00000361720 HNRNPMP52272 730 aaKnown RBP eCLIP27.43■■□□□ 1.98
GPATCH3-201ENST00000361720 CHIC2Q9UKJ5 165 aa27.43■■□□□ 1.98
GPATCH3-201ENST00000361720 SYCP2Q9BX26 1530 aa27.42■■□□□ 1.98
GPATCH3-201ENST00000361720 CD109Q6YHK3 1445 aa27.42■■□□□ 1.98
GPATCH3-201ENST00000361720 ARAP3Q8WWN8 1544 aa27.4■■□□□ 1.98
GPATCH3-201ENST00000361720 ARHGEF12Q9NZN5 1544 aa27.4■■□□□ 1.98
GPATCH3-201ENST00000361720 FANCAO15360 1455 aa27.39■■□□□ 1.98
GPATCH3-201ENST00000361720 MBD5Q9P267 1494 aa27.39■■□□□ 1.98
GPATCH3-201ENST00000361720 MAP3K4Q9Y6R4 1608 aa27.39■■□□□ 1.98
GPATCH3-201ENST00000361720 FAM69CQ0P6D2 419 aa27.39■■□□□ 1.98
GPATCH3-201ENST00000361720 EFCAB2Q5VUJ9 269 aa27.39■■□□□ 1.98
GPATCH3-201ENST00000361720 CROCC2H7BZ55 1655 aa27.38■■□□□ 1.97
GPATCH3-201ENST00000361720 GLI2P10070 1586 aa27.38■■□□□ 1.97
GPATCH3-201ENST00000361720 ZNF316A6NFI3 1004 aaPredicted RBP27.38■■□□□ 1.97
GPATCH3-201ENST00000361720 KIF13AQ9H1H9 1805 aa27.37■■□□□ 1.97
GPATCH3-201ENST00000361720 ABCC1P33527 1531 aa27.36■■□□□ 1.97
GPATCH3-201ENST00000361720 TSPOAP1O95153 1857 aa27.34■■□□□ 1.97
GPATCH3-201ENST00000361720 ARHGEF5Q12774 1597 aa27.33■■□□□ 1.97
GPATCH3-201ENST00000361720 RRP7BPQ9NSQ0 103 aa27.32■■□□□ 1.96
GPATCH3-201ENST00000361720 ACIN1Q9UKV3 1341 aaKnown RBP27.31■■□□□ 1.96
GPATCH3-201ENST00000361720 KIAA1107Q9UPP5 1409 aa27.29■■□□□ 1.96
GPATCH3-201ENST00000361720 TRAPPC8Q9Y2L5 1435 aa27.29■■□□□ 1.96
GPATCH3-201ENST00000361720 CCDC141Q6ZP82 1450 aa27.29■■□□□ 1.96
GPATCH3-201ENST00000361720 AKNAQ7Z591 1439 aa27.29■■□□□ 1.96
GPATCH3-201ENST00000361720 PLEKHH2Q8IVE3 1493 aa27.29■■□□□ 1.96
GPATCH3-201ENST00000361720 PPRC1Q5VV67 1664 aaKnown RBP27.28■■□□□ 1.96
GPATCH3-201ENST00000361720 RAB3GAP2Q9H2M9 1393 aa27.27■■□□□ 1.96
GPATCH3-201ENST00000361720 ADGRL1O94910 1474 aa27.27■■□□□ 1.96
GPATCH3-201ENST00000361720 SETD5Q9C0A6 1442 aa27.27■■□□□ 1.96
GPATCH3-201ENST00000361720 ADGBQ8N7X0 1667 aa27.26■■□□□ 1.95
GPATCH3-201ENST00000361720 NAIPQ13075 1403 aa27.26■■□□□ 1.95
GPATCH3-201ENST00000361720 HFM1A2PYH4 1435 aa27.26■■□□□ 1.95
GPATCH3-201ENST00000361720 C9orf84Q5VXU9 1444 aa27.26■■□□□ 1.95
GPATCH3-201ENST00000361720 KDM6BO15054 1643 aa27.24■■□□□ 1.95
GPATCH3-201ENST00000361720 SCAPERQ9BY12 1400 aa27.23■■□□□ 1.95
GPATCH3-201ENST00000361720 GCC2Q8IWJ2 1684 aa27.23■■□□□ 1.95
GPATCH3-201ENST00000361720 SHANK2Q9UPX8 1470 aa27.23■■□□□ 1.95
GPATCH3-201ENST00000361720 CFAP74Q9C0B2 1584 aa27.22■■□□□ 1.95
GPATCH3-201ENST00000361720 AFAP1Q8N556 730 aa27.22■■□□□ 1.95
GPATCH3-201ENST00000361720 CENPBP07199 599 aaPredicted RBP27.21■■□□□ 1.95
GPATCH3-201ENST00000361720 CLSPNQ9HAW4 1339 aa27.21■■□□□ 1.95
GPATCH3-201ENST00000361720 ADGRL2O95490 1459 aa27.2■■□□□ 1.94
GPATCH3-201ENST00000361720 NCOA1Q15788 1441 aa27.2■■□□□ 1.94
GPATCH3-201ENST00000361720 ROCK1Q13464 1354 aa27.2■■□□□ 1.94
GPATCH3-201ENST00000361720 TSPY4P0CV99 314 aa27.19■■□□□ 1.94
GPATCH3-201ENST00000361720 TSPY10P0CW01 314 aa27.19■■□□□ 1.94
GPATCH3-201ENST00000361720 NEUROD1Q13562 356 aa27.17■■□□□ 1.94
GPATCH3-201ENST00000361720 NEO1Q92859 1461 aa27.17■■□□□ 1.94
GPATCH3-201ENST00000361720 MAST1Q9Y2H9 1570 aa27.16■■□□□ 1.94
GPATCH3-201ENST00000361720 RSPH4AQ5TD94 716 aa27.16■■□□□ 1.94
GPATCH3-201ENST00000361720 ANKRD30AQ9BXX3 1397 aa27.13■■□□□ 1.93
GPATCH3-201ENST00000361720 PELP1Q8IZL8 1130 aaKnown RBP27.13■■□□□ 1.93
GPATCH3-201ENST00000361720 ZFYVE16Q7Z3T8 1539 aa27.1■■□□□ 1.93
GPATCH3-201ENST00000361720 POGZQ7Z3K3 1410 aa27.1■■□□□ 1.93
GPATCH3-201ENST00000361720 RAPGEF3O95398 923 aa27.1■■□□□ 1.93
GPATCH3-201ENST00000361720 KIF15Q9NS87 1388 aa27.09■■□□□ 1.93
GPATCH3-201ENST00000361720 SPAG9O60271 1321 aaKnown RBP27.08■■□□□ 1.93
GPATCH3-201ENST00000361720 INO80Q9ULG1 1556 aaPredicted RBP27.07■■□□□ 1.92
GPATCH3-201ENST00000361720 TRHP20396 242 aaPredicted RBP27.07■■□□□ 1.92
GPATCH3-201ENST00000361720 DHX57Q6P158 1386 aaKnown RBP27.07■■□□□ 1.92
GPATCH3-201ENST00000361720 RICTORQ6R327 1708 aa27.07■■□□□ 1.92
GPATCH3-201ENST00000361720 PLXNC1O60486 1568 aa27.06■■□□□ 1.92
GPATCH3-201ENST00000361720 ZNF518AQ6AHZ1 1483 aa27.06■■□□□ 1.92
GPATCH3-201ENST00000361720 TEX14Q8IWB6 1497 aa27.06■■□□□ 1.92
GPATCH3-201ENST00000361720 DENND4BO75064 1496 aaPredicted RBP27.05■■□□□ 1.92
GPATCH3-201ENST00000361720 ATP7AQ04656 1500 aa27.05■■□□□ 1.92
GPATCH3-201ENST00000361720 KDM5CP41229 1560 aa27.04■■□□□ 1.92
GPATCH3-201ENST00000361720 FRMPD1Q5SYB0 1578 aa27.04■■□□□ 1.92
GPATCH3-201ENST00000361720 KIDINS220Q9ULH0 1771 aa27.04■■□□□ 1.92
GPATCH3-201ENST00000361720 ANKRD50Q9ULJ7 1429 aa27.02■■□□□ 1.92
GPATCH3-201ENST00000361720 MYT1LQ9UL68 1186 aa27.01■■□□□ 1.91
GPATCH3-201ENST00000361720 RTEL1-TNFRSF6BF6WH68 1400 aa27■■□□□ 1.91
GPATCH3-201ENST00000361720 COL17A1Q9UMD9 1497 aaPredicted RBP27■■□□□ 1.91
GPATCH3-201ENST00000361720 HECW2Q9P2P5 1572 aa26.98■■□□□ 1.91
GPATCH3-201ENST00000361720 TRIM52Q96A61 297 aa26.95■■□□□ 1.9
GPATCH3-201ENST00000361720 DUOX2Q9NRD8 1548 aa26.94■■□□□ 1.9
GPATCH3-201ENST00000361720 ABCA6Q8N139 1617 aa26.93■■□□□ 1.9
GPATCH3-201ENST00000361720 MLH3Q9UHC1 1453 aa26.93■■□□□ 1.9
GPATCH3-201ENST00000361720 YEATS2Q9ULM3 1422 aa26.9■■□□□ 1.9
GPATCH3-201ENST00000361720 GTF3C3Q9Y5Q9 886 aa26.89■■□□□ 1.9
GPATCH3-201ENST00000361720 MIER1Q8N108 512 aa26.87■■□□□ 1.89
GPATCH3-201ENST00000361720 ZMYM4Q5VZL5 1548 aa26.86■■□□□ 1.89
GPATCH3-201ENST00000361720 DIP2CQ9Y2E4 1556 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms