RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 PDE4AP27815 886 aa17.86■□□□□ 0.45
SMC5-201ENST00000361138 SLKQ9H2G2 1235 aaPredicted RBP17.86■□□□□ 0.45
SMC5-201ENST00000361138 STAG3Q9UJ98 1225 aa17.86■□□□□ 0.45
SMC5-201ENST00000361138 PLPPR3Q6T4P5 718 aa17.85■□□□□ 0.45
SMC5-201ENST00000361138 GZF1Q9H116 711 aaPredicted RBP17.84■□□□□ 0.45
SMC5-201ENST00000361138 PTMSP20962 102 aa17.84■□□□□ 0.45
SMC5-201ENST00000361138 PDE3BQ13370 1112 aa17.83■□□□□ 0.45
SMC5-201ENST00000361138 ARID4BQ4LE39 1312 aaPredicted RBP17.83■□□□□ 0.44
SMC5-201ENST00000361138 L3MBTL2Q969R5 705 aa17.82■□□□□ 0.44
SMC5-201ENST00000361138 MAPK8IP3Q9UPT6 1336 aa17.82■□□□□ 0.44
SMC5-201ENST00000361138 EIF4G1Q04637 1599 aaKnown RBP17.81■□□□□ 0.44
SMC5-201ENST00000361138 CHMP4BQ9H444 224 aaKnown RBP17.81■□□□□ 0.44
SMC5-201ENST00000361138 PRKRIP1Q9H875 184 aaPredicted RBP17.81■□□□□ 0.44
SMC5-201ENST00000361138 GBP4Q96PP9 640 aa17.8■□□□□ 0.44
SMC5-201ENST00000361138 PDS5BQ9NTI5 1447 aa17.8■□□□□ 0.44
SMC5-201ENST00000361138 TPRNQ4KMQ1 711 aa17.8■□□□□ 0.44
SMC5-201ENST00000361138 ROCK2O75116 1388 aaKnown RBP17.79■□□□□ 0.44
SMC5-201ENST00000361138 ESF1Q9H501 851 aaKnown RBP17.79■□□□□ 0.44
SMC5-201ENST00000361138 RRP1P56182 461 aaKnown RBP17.79■□□□□ 0.44
SMC5-201ENST00000361138 PKD2Q13563 968 aa17.78■□□□□ 0.44
SMC5-201ENST00000361138 SMARCA4P51532 1647 aa17.78■□□□□ 0.44
SMC5-201ENST00000361138 KIF15Q9NS87 1388 aa17.77■□□□□ 0.43
SMC5-201ENST00000361138 EXOC6Q8TAG9 804 aa17.76■□□□□ 0.43
SMC5-201ENST00000361138 ATAD2BQ9ULI0 1458 aa17.75■□□□□ 0.43
SMC5-201ENST00000361138 PLCB2Q00722 1185 aa17.75■□□□□ 0.43
SMC5-201ENST00000361138 PMFBP1Q8TBY8 1022 aa17.74■□□□□ 0.43
SMC5-201ENST00000361138 SLC4A3P48751 1232 aa17.74■□□□□ 0.43
SMC5-201ENST00000361138 FAM161AQ3B820 660 aa17.74■□□□□ 0.43
SMC5-201ENST00000361138 RWDD1Q9H446 243 aaPredicted RBP17.74■□□□□ 0.43
SMC5-201ENST00000361138 MYBBP1AQ9BQG0 1328 aaKnown RBP17.74■□□□□ 0.43
SMC5-201ENST00000361138 KIF21BO75037 1637 aa17.74■□□□□ 0.43
SMC5-201ENST00000361138 CENPQQ7L2Z9 268 aaPredicted RBP17.73■□□□□ 0.43
SMC5-201ENST00000361138 CCDC18Q5T9S5 1454 aa17.73■□□□□ 0.43
SMC5-201ENST00000361138 CHAF1AQ13111 956 aaPredicted RBP17.73■□□□□ 0.43
SMC5-201ENST00000361138 HSP90AA2PQ14568 343 aaPredicted RBP17.73■□□□□ 0.43
SMC5-201ENST00000361138 NLRP13Q86W25 1043 aa17.73■□□□□ 0.43
SMC5-201ENST00000361138 PHLDB1Q86UU1 1377 aa17.7■□□□□ 0.42
SMC5-201ENST00000361138 GOLGA2Q08379 1002 aa17.7■□□□□ 0.42
SMC5-201ENST00000361138 FHOD3Q2V2M9 1422 aa17.7■□□□□ 0.42
SMC5-201ENST00000361138 CDK11BP21127 795 aaKnown RBP17.69■□□□□ 0.42
SMC5-201ENST00000361138 CFAP44Q96MT7 982 aa17.69■□□□□ 0.42
SMC5-201ENST00000361138 MFAP1P55081 439 aaKnown RBP17.68■□□□□ 0.42
SMC5-201ENST00000361138 CRBNQ96SW2 442 aa17.67■□□□□ 0.42
SMC5-201ENST00000361138 CNTLNQ9NXG0 1405 aa17.67■□□□□ 0.42
SMC5-201ENST00000361138 U2SURPO15042 1029 aaKnown RBP17.67■□□□□ 0.42
SMC5-201ENST00000361138 ZRSR1Q15695 479 aaKnown RBP17.66■□□□□ 0.42
SMC5-201ENST00000361138 PLIN1O60240 522 aa17.66■□□□□ 0.42
SMC5-201ENST00000361138 CADPSQ9ULU8 1353 aa17.66■□□□□ 0.42
SMC5-201ENST00000361138 MORC1Q86VD1 984 aa17.66■□□□□ 0.42
SMC5-201ENST00000361138 DDX11L8A8MPP1 907 aa17.64■□□□□ 0.41
SMC5-201ENST00000361138 GOLGA6L6A8MZA4 724 aa17.63■□□□□ 0.41
SMC5-201ENST00000361138 ARID3AQ99856 593 aa17.63■□□□□ 0.41
SMC5-201ENST00000361138 SENP3Q9H4L4 574 aaPredicted RBP17.62■□□□□ 0.41
SMC5-201ENST00000361138 VSIG10Q8N0Z9 540 aa17.62■□□□□ 0.41
SMC5-201ENST00000361138 ITPRIPQ8IWB1 547 aa17.62■□□□□ 0.41
SMC5-201ENST00000361138 NUP155O75694 1391 aa17.61■□□□□ 0.41
SMC5-201ENST00000361138 CCDC7Q96M83 1385 aa17.61■□□□□ 0.41
SMC5-201ENST00000361138 MCCP23508 829 aa17.61■□□□□ 0.41
SMC5-201ENST00000361138 RRBP1Q9P2E9 1410 aaKnown RBP17.61■□□□□ 0.41
SMC5-201ENST00000361138 ANKRD30AQ9BXX3 1397 aa17.6■□□□□ 0.41
SMC5-201ENST00000361138 CENPJQ9HC77 1338 aaPredicted RBP17.6■□□□□ 0.41
SMC5-201ENST00000361138 IPO8O15397 1037 aaKnown RBP17.6■□□□□ 0.41
SMC5-201ENST00000361138 ANO8Q9HCE9 1232 aaPredicted RBP17.6■□□□□ 0.41
SMC5-201ENST00000361138 ZBTB7CA1YPR0 619 aa17.6■□□□□ 0.41
SMC5-201ENST00000361138 KIAA2012Q0VF49 1180 aa17.6■□□□□ 0.41
SMC5-201ENST00000361138 TDRD9Q8NDG6 1382 aaKnown RBP17.59■□□□□ 0.41
SMC5-201ENST00000361138 NFKBIBQ15653 356 aa17.59■□□□□ 0.41
SMC5-201ENST00000361138 CCDC146Q8IYE0 955 aa17.59■□□□□ 0.41
SMC5-201ENST00000361138 USP47Q96K76 1375 aa17.58■□□□□ 0.4
SMC5-201ENST00000361138 PAK3O75914 559 aaPredicted RBP17.57■□□□□ 0.4
SMC5-201ENST00000361138 MSH5O43196 834 aa17.56■□□□□ 0.4
SMC5-201ENST00000361138 IL27Q8NEV9 243 aa17.56■□□□□ 0.4
SMC5-201ENST00000361138 UACAQ9BZF9 1416 aa17.55■□□□□ 0.4
SMC5-201ENST00000361138 DRC7Q8IY82 874 aa17.55■□□□□ 0.4
SMC5-201ENST00000361138 WASHC2AQ641Q2 1341 aa17.55■□□□□ 0.4
SMC5-201ENST00000361138 SYAP1Q96A49 352 aaPredicted RBP17.54■□□□□ 0.4
SMC5-201ENST00000361138 CALD1Q05682 793 aaKnown RBP17.54■□□□□ 0.4
SMC5-201ENST00000361138 FOXD4L1Q9NU39 408 aa17.53■□□□□ 0.4
SMC5-201ENST00000361138 KIF7Q2M1P5 1343 aa17.53■□□□□ 0.4
SMC5-201ENST00000361138 ST20-MTHFSA0A0A6YYL1 179 aa17.53■□□□□ 0.4
SMC5-201ENST00000361138 LRRC9Q6ZRR7 1453 aa17.52■□□□□ 0.4
SMC5-201ENST00000361138 GOLGA6L4A6NEF3 574 aa17.52■□□□□ 0.4
SMC5-201ENST00000361138 SKOR2Q2VWA4 1001 aaPredicted RBP17.52■□□□□ 0.4
SMC5-201ENST00000361138 EIF3AQ14152 1382 aaKnown RBP17.51■□□□□ 0.39
SMC5-201ENST00000361138 FANCD2Q9BXW9 1451 aa17.5■□□□□ 0.39
SMC5-201ENST00000361138 KANK1Q14678 1352 aa17.5■□□□□ 0.39
SMC5-201ENST00000361138 NRDCO43847 1150 aa17.5■□□□□ 0.39
SMC5-201ENST00000361138 SMC4Q9NTJ3 1288 aa17.5■□□□□ 0.39
SMC5-201ENST00000361138 BRPF3Q9ULD4 1205 aa17.5■□□□□ 0.39
SMC5-201ENST00000361138 CLUAP1Q96AJ1 413 aa17.49■□□□□ 0.39
SMC5-201ENST00000361138 PANK3Q9H999 370 aa17.49■□□□□ 0.39
SMC5-201ENST00000361138 POGKQ9P215 609 aa17.49■□□□□ 0.39
SMC5-201ENST00000361138 FGD6Q6ZV73 1430 aa17.49■□□□□ 0.39
SMC5-201ENST00000361138 U2AF1L5P0DN76 240 aaPredicted RBP17.48■□□□□ 0.39
SMC5-201ENST00000361138 U2AF1Q01081 240 aaKnown RBP eCLIP17.48■□□□□ 0.39
SMC5-201ENST00000361138 E9PSI1 815 aa17.47■□□□□ 0.39
SMC5-201ENST00000361138 TRHP20396 242 aaPredicted RBP17.47■□□□□ 0.39
SMC5-201ENST00000361138 WDR97A6NE52 1622 aa17.46■□□□□ 0.39
SMC5-201ENST00000361138 CUX1P39880 1505 aa17.46■□□□□ 0.39
SMC5-201ENST00000361138 PRKCSHP14314 528 aaPredicted RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms