RNA–Protein interactions for RNA: ENST00000360982.2

NCKAP1-201, Transcript of NCK associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene NCKAP1, Length 4,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-201ENST00000360982 NUP155O75694 1391 aa26.55■■□□□ 1.84
NCKAP1-201ENST00000360982 SOX12O15370 315 aa26.54■■□□□ 1.84
NCKAP1-201ENST00000360982 SPAG9O60271 1321 aaKnown RBP26.52■■□□□ 1.84
NCKAP1-201ENST00000360982 TOP2AP11388 1531 aaKnown RBP26.52■■□□□ 1.84
NCKAP1-201ENST00000360982 GOLGA6L22H0YM25 854 aa26.51■■□□□ 1.83
NCKAP1-201ENST00000360982 EID1Q9Y6B2 187 aa26.51■■□□□ 1.83
NCKAP1-201ENST00000360982 FRAT1Q92837 279 aaPredicted RBP26.5■■□□□ 1.83
NCKAP1-201ENST00000360982 ABCC8Q09428 1581 aa26.49■■□□□ 1.83
NCKAP1-201ENST00000360982 RAPGEF2Q9Y4G8 1499 aa26.49■■□□□ 1.83
NCKAP1-201ENST00000360982 OS9Q13438 667 aaPredicted RBP26.49■■□□□ 1.83
NCKAP1-201ENST00000360982 RTF1Q92541 710 aaKnown RBP26.47■■□□□ 1.83
NCKAP1-201ENST00000360982 ATAD2BQ9ULI0 1458 aa26.47■■□□□ 1.83
NCKAP1-201ENST00000360982 SENP3-EIF4A1A0A087X0R7 540 aa26.47■■□□□ 1.83
NCKAP1-201ENST00000360982 KANK4Q5T7N3 995 aaPredicted RBP26.46■■□□□ 1.83
NCKAP1-201ENST00000360982 WASHC2CQ9Y4E1 1318 aa26.44■■□□□ 1.82
NCKAP1-201ENST00000360982 MPHOSPH9Q99550 1183 aa26.44■■□□□ 1.82
NCKAP1-201ENST00000360982 GOLGA2Q08379 1002 aa26.43■■□□□ 1.82
NCKAP1-201ENST00000360982 CCDC18Q5T9S5 1454 aa26.42■■□□□ 1.82
NCKAP1-201ENST00000360982 PAK3O75914 559 aaPredicted RBP26.41■■□□□ 1.82
NCKAP1-201ENST00000360982 NAP1L5Q96NT1 182 aaPredicted RBP26.41■■□□□ 1.82
NCKAP1-201ENST00000360982 TRIM44Q96DX7 344 aaPredicted RBP26.4■■□□□ 1.82
NCKAP1-201ENST00000360982 CHMP4AQ9BY43 222 aa26.4■■□□□ 1.82
NCKAP1-201ENST00000360982 ZRSR1Q15695 479 aaKnown RBP26.4■■□□□ 1.82
NCKAP1-201ENST00000360982 HNRNPMP52272 730 aaKnown RBP eCLIP26.39■■□□□ 1.823e-6■■■■□ 21.5
NCKAP1-201ENST00000360982 CSB-PGBD3P0DP91 1061 aa26.38■■□□□ 1.81
NCKAP1-201ENST00000360982 OSCARQ8IYS5 282 aa26.38■■□□□ 1.81
NCKAP1-201ENST00000360982 EIF3AQ14152 1382 aaKnown RBP26.37■■□□□ 1.81
NCKAP1-201ENST00000360982 CALD1Q05682 793 aaKnown RBP26.36■■□□□ 1.81
NCKAP1-201ENST00000360982 B4GALNT3Q6L9W6 998 aa26.36■■□□□ 1.81
NCKAP1-201ENST00000360982 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.35■■□□□ 1.81
NCKAP1-201ENST00000360982 ROCK2O75116 1388 aaKnown RBP26.35■■□□□ 1.81
NCKAP1-201ENST00000360982 HSPA5P11021 654 aaKnown RBP26.34■■□□□ 1.81
NCKAP1-201ENST00000360982 KTN1Q86UP2 1357 aaKnown RBP26.34■■□□□ 1.81
NCKAP1-201ENST00000360982 FOXD1Q16676 465 aa26.33■■□□□ 1.81
NCKAP1-201ENST00000360982 TERF2IPQ9NYB0 399 aa26.33■■□□□ 1.81
NCKAP1-201ENST00000360982 FANCD2Q9BXW9 1451 aa26.32■■□□□ 1.8
NCKAP1-201ENST00000360982 PTPRGP23470 1445 aa26.32■■□□□ 1.8
NCKAP1-201ENST00000360982 FHOD3Q2V2M9 1422 aa26.32■■□□□ 1.8
NCKAP1-201ENST00000360982 FGD1P98174 961 aa26.32■■□□□ 1.8
NCKAP1-201ENST00000360982 KCNJ4P48050 445 aa26.3■■□□□ 1.8
NCKAP1-201ENST00000360982 CYB5RLQ6IPT4 315 aa26.29■■□□□ 1.8
NCKAP1-201ENST00000360982 CCER2I3L3R5 266 aa26.28■■□□□ 1.8
NCKAP1-201ENST00000360982 U2AF1L5P0DN76 240 aaPredicted RBP26.26■■□□□ 1.79
NCKAP1-201ENST00000360982 U2AF1Q01081 240 aaKnown RBP eCLIP26.26■■□□□ 1.797e-11■■□□□ 12.5
NCKAP1-201ENST00000360982 IPO8O15397 1037 aaKnown RBP26.26■■□□□ 1.79
NCKAP1-201ENST00000360982 RGS3P49796 1198 aa26.26■■□□□ 1.79
NCKAP1-201ENST00000360982 RAB3GAP2Q9H2M9 1393 aa26.26■■□□□ 1.79
NCKAP1-201ENST00000360982 WIZO95785 1651 aa26.25■■□□□ 1.79
NCKAP1-201ENST00000360982 NGDNQ8NEJ9 315 aaKnown RBP26.24■■□□□ 1.79
NCKAP1-201ENST00000360982 RALBP1Q15311 655 aa26.23■■□□□ 1.79
NCKAP1-201ENST00000360982 CFAP44Q96MT7 982 aa26.21■■□□□ 1.79
NCKAP1-201ENST00000360982 CCDC9Q9Y3X0 531 aaKnown RBP26.18■■□□□ 1.78
NCKAP1-201ENST00000360982 SMARCA4P51532 1647 aa26.16■■□□□ 1.78
NCKAP1-201ENST00000360982 HDAC5Q9UQL6 1122 aa26.15■■□□□ 1.78
NCKAP1-201ENST00000360982 VGFO15240 615 aaPredicted RBP26.12■■□□□ 1.77
NCKAP1-201ENST00000360982 L3MBTL2Q969R5 705 aa26.11■■□□□ 1.77
NCKAP1-201ENST00000360982 STK31Q9BXU1 1019 aa26.11■■□□□ 1.77
NCKAP1-201ENST00000360982 MCCP23508 829 aa26.1■■□□□ 1.77
NCKAP1-201ENST00000360982 TMX4Q9H1E5 349 aaPredicted RBP26.1■■□□□ 1.77
NCKAP1-201ENST00000360982 UACAQ9BZF9 1416 aa26.1■■□□□ 1.77
NCKAP1-201ENST00000360982 ZNF330Q9Y3S2 320 aaPredicted RBP26.09■■□□□ 1.77
NCKAP1-201ENST00000360982 NAP1L2Q9ULW6 460 aaPredicted RBP26.09■■□□□ 1.77
NCKAP1-201ENST00000360982 AMPHP49418 695 aa26.08■■□□□ 1.77
NCKAP1-201ENST00000360982 NUTM2DQ5VT03 806 aaPredicted RBP26.06■■□□□ 1.76
NCKAP1-201ENST00000360982 LMOD3Q0VAK6 560 aa26.06■■□□□ 1.76
NCKAP1-201ENST00000360982 CCDC144AA2RUR9 1427 aa26.05■■□□□ 1.76
NCKAP1-201ENST00000360982 HSP90AB1P08238 724 aaKnown RBP26.05■■□□□ 1.76
NCKAP1-201ENST00000360982 TRAK1Q9UPV9 953 aa26.03■■□□□ 1.76
NCKAP1-201ENST00000360982 GAPVD1Q14C86 1478 aa26.03■■□□□ 1.76
NCKAP1-201ENST00000360982 PTMAP06454 111 aaKnown RBP26.02■■□□□ 1.76
NCKAP1-201ENST00000360982 TAOK2Q9UL54 1235 aa26■■□□□ 1.75
NCKAP1-201ENST00000360982 NLRP13Q86W25 1043 aa25.99■■□□□ 1.75
NCKAP1-201ENST00000360982 TULP1O00294 542 aaPredicted RBP25.98■■□□□ 1.75
NCKAP1-201ENST00000360982 L1TD1Q5T7N2 865 aaKnown RBP25.98■■□□□ 1.75
NCKAP1-201ENST00000360982 KIAA1211Q6ZU35 1233 aa25.98■■□□□ 1.75
NCKAP1-201ENST00000360982 GOLGA6L4A6NEF3 574 aa25.97■■□□□ 1.75
NCKAP1-201ENST00000360982 IPO9Q96P70 1041 aaKnown RBP25.97■■□□□ 1.75
NCKAP1-201ENST00000360982 FAM69CQ0P6D2 419 aa25.96■■□□□ 1.75
NCKAP1-201ENST00000360982 NUTM2FA1L443 756 aa25.96■■□□□ 1.75
NCKAP1-201ENST00000360982 ISY1Q9ULR0 285 aaKnown RBP25.94■■□□□ 1.74
NCKAP1-201ENST00000360982 TPRNQ4KMQ1 711 aa25.94■■□□□ 1.74
NCKAP1-201ENST00000360982 HSCBQ8IWL3 235 aa25.94■■□□□ 1.74
NCKAP1-201ENST00000360982 RWDD1Q9H446 243 aaPredicted RBP25.94■■□□□ 1.74
NCKAP1-201ENST00000360982 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.92■■□□□ 1.744e-6■■□□□ 11.9
NCKAP1-201ENST00000360982 FGD5Q6ZNL6 1462 aa25.92■■□□□ 1.74
NCKAP1-201ENST00000360982 RCAN3Q9UKA8 241 aa25.92■■□□□ 1.74
NCKAP1-201ENST00000360982 HMMRO75330 724 aa25.91■■□□□ 1.74
NCKAP1-201ENST00000360982 TAF7LQ5H9L4 462 aa25.91■■□□□ 1.74
NCKAP1-201ENST00000360982 GORABQ5T7V8 394 aa25.91■■□□□ 1.74
NCKAP1-201ENST00000360982 EVC2Q86UK5 1308 aa25.91■■□□□ 1.74
NCKAP1-201ENST00000360982 ITPRIPQ8IWB1 547 aa25.91■■□□□ 1.74
NCKAP1-201ENST00000360982 LTV1Q96GA3 475 aaPredicted RBP25.91■■□□□ 1.74
NCKAP1-201ENST00000360982 NRDCO43847 1150 aa25.9■■□□□ 1.74
NCKAP1-201ENST00000360982 NCAPD3P42695 1498 aa25.9■■□□□ 1.74
NCKAP1-201ENST00000360982 PHLDB1Q86UU1 1377 aa25.9■■□□□ 1.74
NCKAP1-201ENST00000360982 APBB1O00213 710 aa25.89■■□□□ 1.74
NCKAP1-201ENST00000360982 DNTTIP2Q5QJE6 756 aaKnown RBP25.89■■□□□ 1.74
NCKAP1-201ENST00000360982 FANCIQ9NVI1 1328 aa25.89■■□□□ 1.74
NCKAP1-201ENST00000360982 IGF1RP08069 1367 aa25.88■■□□□ 1.73
NCKAP1-201ENST00000360982 GOLGA6L6A8MZA4 724 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms