RNA–Protein interactions for RNA: ENST00000360540.9

PCMTD1-201, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCMTD1, Length 4,252 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-201ENST00000360540 CCDC18Q5T9S5 1454 aa18.44■□□□□ 0.54
PCMTD1-201ENST00000360540 POGKQ9P215 609 aa18.44■□□□□ 0.54
PCMTD1-201ENST00000360540 CFAP53Q96M91 514 aa18.43■□□□□ 0.54
PCMTD1-201ENST00000360540 PRKRIP1Q9H875 184 aaPredicted RBP18.43■□□□□ 0.54
PCMTD1-201ENST00000360540 ARID4BQ4LE39 1312 aaPredicted RBP18.42■□□□□ 0.54
PCMTD1-201ENST00000360540 SOX12O15370 315 aa18.42■□□□□ 0.54
PCMTD1-201ENST00000360540 KIF3BO15066 747 aa18.41■□□□□ 0.54
PCMTD1-201ENST00000360540 NCAPD3P42695 1498 aa18.4■□□□□ 0.54
PCMTD1-201ENST00000360540 DNAJC5BQ9UF47 199 aa18.4■□□□□ 0.54
PCMTD1-201ENST00000360540 NOP58Q9Y2X3 529 aaKnown RBP18.4■□□□□ 0.54
PCMTD1-201ENST00000360540 FTSJ3Q8IY81 847 aaKnown RBP18.39■□□□□ 0.53
PCMTD1-201ENST00000360540 RCAN3Q9UKA8 241 aa18.39■□□□□ 0.53
PCMTD1-201ENST00000360540 AQRO60306 1485 aaKnown RBP eCLIP18.39■□□□□ 0.53
PCMTD1-201ENST00000360540 NESP48681 1621 aa18.39■□□□□ 0.53
PCMTD1-201ENST00000360540 LRRC9Q6ZRR7 1453 aa18.38■□□□□ 0.53
PCMTD1-201ENST00000360540 EFCAB2Q5VUJ9 269 aa18.37■□□□□ 0.53
PCMTD1-201ENST00000360540 FGD6Q6ZV73 1430 aa18.37■□□□□ 0.53
PCMTD1-201ENST00000360540 SRPK2P78362 688 aaKnown RBP18.37■□□□□ 0.53
PCMTD1-201ENST00000360540 CCDC146Q8IYE0 955 aa18.37■□□□□ 0.53
PCMTD1-201ENST00000360540 GAPVD1Q14C86 1478 aa18.37■□□□□ 0.53
PCMTD1-201ENST00000360540 KTN1Q86UP2 1357 aaKnown RBP18.37■□□□□ 0.53
PCMTD1-201ENST00000360540 MORC1Q86VD1 984 aa18.35■□□□□ 0.53
PCMTD1-201ENST00000360540 RTN4Q9NQC3 1192 aaKnown RBP18.35■□□□□ 0.53
PCMTD1-201ENST00000360540 MAPK8IP3Q9UPT6 1336 aa18.34■□□□□ 0.53
PCMTD1-201ENST00000360540 PRXQ9BXM0 1461 aa18.33■□□□□ 0.53
PCMTD1-201ENST00000360540 PLIN1O60240 522 aa18.33■□□□□ 0.52
PCMTD1-201ENST00000360540 NUDCQ9Y266 331 aa18.32■□□□□ 0.52
PCMTD1-201ENST00000360540 PANK3Q9H999 370 aa18.3■□□□□ 0.52
PCMTD1-201ENST00000360540 WASHC2AQ641Q2 1341 aa18.3■□□□□ 0.52
PCMTD1-201ENST00000360540 CFTRP13569 1480 aa18.29■□□□□ 0.52
PCMTD1-201ENST00000360540 CUX1P39880 1505 aa18.29■□□□□ 0.52
PCMTD1-201ENST00000360540 RALBP1Q15311 655 aa18.28■□□□□ 0.52
PCMTD1-201ENST00000360540 MYH16Q9H6N6 1097 aa18.28■□□□□ 0.52
PCMTD1-201ENST00000360540 USP47Q96K76 1375 aa18.28■□□□□ 0.52
PCMTD1-201ENST00000360540 NLRP13Q86W25 1043 aa18.28■□□□□ 0.52
PCMTD1-201ENST00000360540 TRAK1Q9UPV9 953 aa18.27■□□□□ 0.52
PCMTD1-201ENST00000360540 SPAG9O60271 1321 aaKnown RBP18.27■□□□□ 0.52
PCMTD1-201ENST00000360540 KANK1Q14678 1352 aa18.27■□□□□ 0.52
PCMTD1-201ENST00000360540 DDRGK1Q96HY6 314 aa18.27■□□□□ 0.51
PCMTD1-201ENST00000360540 MYOM3Q5VTT5 1437 aa18.27■□□□□ 0.51
PCMTD1-201ENST00000360540 U2AF1L5P0DN76 240 aaPredicted RBP18.26■□□□□ 0.51
PCMTD1-201ENST00000360540 U2AF1Q01081 240 aaKnown RBP eCLIP18.26■□□□□ 0.51
PCMTD1-201ENST00000360540 SPRYD3Q8NCJ5 442 aa18.26■□□□□ 0.51
PCMTD1-201ENST00000360540 CLUAP1Q96AJ1 413 aa18.26■□□□□ 0.51
PCMTD1-201ENST00000360540 KIF7Q2M1P5 1343 aa18.26■□□□□ 0.51
PCMTD1-201ENST00000360540 RRBP1Q9P2E9 1410 aaKnown RBP18.26■□□□□ 0.51
PCMTD1-201ENST00000360540 RRP7AQ9Y3A4 280 aaKnown RBP18.24■□□□□ 0.51
PCMTD1-201ENST00000360540 TPRNQ4KMQ1 711 aa18.24■□□□□ 0.51
PCMTD1-201ENST00000360540 CCDC184Q52MB2 194 aa18.24■□□□□ 0.51
PCMTD1-201ENST00000360540 LMOD2Q6P5Q4 547 aa18.24■□□□□ 0.51
PCMTD1-201ENST00000360540 NCOA2Q15596 1464 aa18.23■□□□□ 0.51
PCMTD1-201ENST00000360540 BECN1Q14457 450 aa18.22■□□□□ 0.51
PCMTD1-201ENST00000360540 UACAQ9BZF9 1416 aa18.22■□□□□ 0.51
PCMTD1-201ENST00000360540 NBPF8Q3BBV2 869 aa18.22■□□□□ 0.51
PCMTD1-201ENST00000360540 PTPRGP23470 1445 aa18.21■□□□□ 0.51
PCMTD1-201ENST00000360540 EXOC6Q8TAG9 804 aa18.21■□□□□ 0.51
PCMTD1-201ENST00000360540 A0A0G2JS52 829 aa18.2■□□□□ 0.5
PCMTD1-201ENST00000360540 BCL2L13Q9BXK5 485 aa18.19■□□□□ 0.5
PCMTD1-201ENST00000360540 CCDC144AA2RUR9 1427 aa18.19■□□□□ 0.5
PCMTD1-201ENST00000360540 CASKIN1Q8WXD9 1431 aa18.19■□□□□ 0.5
PCMTD1-201ENST00000360540 DEKP35659 375 aaKnown RBP18.18■□□□□ 0.5
PCMTD1-201ENST00000360540 ANP32BQ92688 251 aaKnown RBP18.18■□□□□ 0.5
PCMTD1-201ENST00000360540 ERICH3Q5RHP9 1530 aa18.18■□□□□ 0.5
PCMTD1-201ENST00000360540 TOP2BQ02880 1626 aa18.18■□□□□ 0.5
PCMTD1-201ENST00000360540 CCDC7Q96M83 1385 aa18.18■□□□□ 0.5
PCMTD1-201ENST00000360540 NUTM2FA1L443 756 aa18.18■□□□□ 0.5
PCMTD1-201ENST00000360540 APBB1O00213 710 aa18.16■□□□□ 0.5
PCMTD1-201ENST00000360540 GOLGA2Q08379 1002 aa18.16■□□□□ 0.5
PCMTD1-201ENST00000360540 MYBBP1AQ9BQG0 1328 aaKnown RBP18.16■□□□□ 0.5
PCMTD1-201ENST00000360540 ZBED9Q6R2W3 1325 aa18.15■□□□□ 0.5
PCMTD1-201ENST00000360540 WASHC2CQ9Y4E1 1318 aa18.14■□□□□ 0.49
PCMTD1-201ENST00000360540 ERICH6BQ5W0A0 696 aa18.14■□□□□ 0.49
PCMTD1-201ENST00000360540 BICRAQ9NZM4 1560 aa18.13■□□□□ 0.49
PCMTD1-201ENST00000360540 POLA1P09884 1462 aaPredicted RBP18.13■□□□□ 0.49
PCMTD1-201ENST00000360540 KIF15Q9NS87 1388 aa18.13■□□□□ 0.49
PCMTD1-201ENST00000360540 RSPH4AQ5TD94 716 aa18.13■□□□□ 0.49
PCMTD1-201ENST00000360540 NCLP19338 710 aaKnown RBP18.12■□□□□ 0.49
PCMTD1-201ENST00000360540 SLC4A3P48751 1232 aa18.12■□□□□ 0.49
PCMTD1-201ENST00000360540 NBPF1Q3BBV0 1214 aa18.12■□□□□ 0.49
PCMTD1-201ENST00000360540 SLKQ9H2G2 1235 aaPredicted RBP18.12■□□□□ 0.49
PCMTD1-201ENST00000360540 WDR97A6NE52 1622 aa18.11■□□□□ 0.49
PCMTD1-201ENST00000360540 APAF1O14727 1248 aa18.11■□□□□ 0.49
PCMTD1-201ENST00000360540 AFAP1Q8N556 730 aa18.1■□□□□ 0.49
PCMTD1-201ENST00000360540 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.09■□□□□ 0.495e-7■■■□□ 15.1
PCMTD1-201ENST00000360540 CRBNQ96SW2 442 aa18.08■□□□□ 0.48
PCMTD1-201ENST00000360540 ANKRD50Q9ULJ7 1429 aa18.08■□□□□ 0.48
PCMTD1-201ENST00000360540 CDCA7LQ96GN5 454 aa18.08■□□□□ 0.48
PCMTD1-201ENST00000360540 TOPBP1Q92547 1522 aa18.08■□□□□ 0.48
PCMTD1-201ENST00000360540 TCERG1O14776 1098 aaKnown RBP18.07■□□□□ 0.48
PCMTD1-201ENST00000360540 ITPRIPQ8IWB1 547 aa18.06■□□□□ 0.48
PCMTD1-201ENST00000360540 C11orf95C9JLR9 678 aaPredicted RBP18.06■□□□□ 0.48
PCMTD1-201ENST00000360540 ELL2O00472 640 aaPredicted RBP18.06■□□□□ 0.48
PCMTD1-201ENST00000360540 RRP1P56182 461 aaKnown RBP18.06■□□□□ 0.48
PCMTD1-201ENST00000360540 PRG4Q92954 1404 aaPredicted RBP18.06■□□□□ 0.48
PCMTD1-201ENST00000360540 PRDM2Q13029 1718 aa18.06■□□□□ 0.48
PCMTD1-201ENST00000360540 IPO9Q96P70 1041 aaKnown RBP18.04■□□□□ 0.48
PCMTD1-201ENST00000360540 FYCO1Q9BQS8 1478 aa18.04■□□□□ 0.48
PCMTD1-201ENST00000360540 TIAM1Q13009 1591 aa18.04■□□□□ 0.48
PCMTD1-201ENST00000360540 SMC4Q9NTJ3 1288 aa18.03■□□□□ 0.48
PCMTD1-201ENST00000360540 HDGFL2Q7Z4V5 671 aaPredicted RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms