RNA–Protein interactions for RNA: ENST00000360467.5

COL4A2-201, Transcript of collagen type IV alpha 2 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A2, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-201ENST00000360467 PKD2Q13563 968 aa21.93■■□□□ 1.1
COL4A2-201ENST00000360467 NACADO15069 1562 aa21.93■■□□□ 1.1
COL4A2-201ENST00000360467 TNIKQ9UKE5 1360 aa21.92■■□□□ 1.1
COL4A2-201ENST00000360467 RTN4Q9NQC3 1192 aaKnown RBP21.91■■□□□ 1.1
COL4A2-201ENST00000360467 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.91■■□□□ 1.1
COL4A2-201ENST00000360467 CHMP3Q9Y3E7 222 aa21.9■■□□□ 1.1
COL4A2-201ENST00000360467 HSPA5P11021 654 aaKnown RBP21.87■■□□□ 1.09
COL4A2-201ENST00000360467 SOGA1O94964 1423 aa21.86■■□□□ 1.09
COL4A2-201ENST00000360467 GOLGA6L4A6NEF3 574 aa21.85■■□□□ 1.09
COL4A2-201ENST00000360467 LTV1Q96GA3 475 aaPredicted RBP21.85■■□□□ 1.09
COL4A2-201ENST00000360467 GNL2Q13823 731 aaKnown RBP21.85■■□□□ 1.09
COL4A2-201ENST00000360467 CHMP4BQ9H444 224 aaKnown RBP21.85■■□□□ 1.09
COL4A2-201ENST00000360467 CECR2Q9BXF3 1484 aa21.85■■□□□ 1.09
COL4A2-201ENST00000360467 ANP32EQ9BTT0 268 aa21.84■■□□□ 1.09
COL4A2-201ENST00000360467 U2AF1L5P0DN76 240 aaPredicted RBP21.84■■□□□ 1.09
COL4A2-201ENST00000360467 MS4A1P11836 297 aa21.84■■□□□ 1.09
COL4A2-201ENST00000360467 U2AF1Q01081 240 aaKnown RBP eCLIP21.84■■□□□ 1.09
COL4A2-201ENST00000360467 PPP4R2Q9NY27 417 aa21.83■■□□□ 1.09
COL4A2-201ENST00000360467 ROCK2O75116 1388 aaKnown RBP21.83■■□□□ 1.09
COL4A2-201ENST00000360467 FHAD1B1AJZ9 1412 aa21.82■■□□□ 1.08
COL4A2-201ENST00000360467 HNRNPMP52272 730 aaKnown RBP eCLIP21.82■■□□□ 1.08
COL4A2-201ENST00000360467 HSCBQ8IWL3 235 aa21.81■■□□□ 1.08
COL4A2-201ENST00000360467 GOLGA6L6A8MZA4 724 aa21.8■■□□□ 1.08
COL4A2-201ENST00000360467 ITPRIPQ8IWB1 547 aa21.8■■□□□ 1.08
COL4A2-201ENST00000360467 ARHGAP35Q9NRY4 1499 aa21.79■■□□□ 1.08
COL4A2-201ENST00000360467 KIF3BO15066 747 aa21.79■■□□□ 1.08
COL4A2-201ENST00000360467 NAP1L5Q96NT1 182 aaPredicted RBP21.79■■□□□ 1.08
COL4A2-201ENST00000360467 TMX4Q9H1E5 349 aaPredicted RBP21.79■■□□□ 1.08
COL4A2-201ENST00000360467 TDRD9Q8NDG6 1382 aaKnown RBP21.78■■□□□ 1.08
COL4A2-201ENST00000360467 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.78■■□□□ 1.08
COL4A2-201ENST00000360467 MCCP23508 829 aa21.78■■□□□ 1.08
COL4A2-201ENST00000360467 ABCC8Q09428 1581 aa21.77■■□□□ 1.08
COL4A2-201ENST00000360467 G3V3G9 751 aa21.76■■□□□ 1.07
COL4A2-201ENST00000360467 KANK4Q5T7N3 995 aaPredicted RBP21.76■■□□□ 1.07
COL4A2-201ENST00000360467 DCAF8Q5TAQ9 597 aa21.76■■□□□ 1.07
COL4A2-201ENST00000360467 DRC7Q8IY82 874 aa21.76■■□□□ 1.07
COL4A2-201ENST00000360467 CCDC146Q8IYE0 955 aa21.76■■□□□ 1.07
COL4A2-201ENST00000360467 NGDNQ8NEJ9 315 aaKnown RBP21.75■■□□□ 1.07
COL4A2-201ENST00000360467 TAF7LQ5H9L4 462 aa21.75■■□□□ 1.07
COL4A2-201ENST00000360467 CARMIL2Q6F5E8 1435 aa21.75■■□□□ 1.07
COL4A2-201ENST00000360467 KTN1Q86UP2 1357 aaKnown RBP21.74■■□□□ 1.07
COL4A2-201ENST00000360467 GORABQ5T7V8 394 aa21.74■■□□□ 1.07
COL4A2-201ENST00000360467 BAZ1AQ9NRL2 1556 aaPredicted RBP21.74■■□□□ 1.07
COL4A2-201ENST00000360467 NUP155O75694 1391 aa21.73■■□□□ 1.07
COL4A2-201ENST00000360467 ERICH6BQ5W0A0 696 aa21.73■■□□□ 1.07
COL4A2-201ENST00000360467 SLC4A10Q6U841 1118 aa21.72■■□□□ 1.07
COL4A2-201ENST00000360467 EID1Q9Y6B2 187 aa21.71■■□□□ 1.07
COL4A2-201ENST00000360467 NOP58Q9Y2X3 529 aaKnown RBP21.71■■□□□ 1.07
COL4A2-201ENST00000360467 KIAA1211Q6ZU35 1233 aa21.71■■□□□ 1.07
COL4A2-201ENST00000360467 SETD5Q9C0A6 1442 aa21.69■■□□□ 1.06
COL4A2-201ENST00000360467 WASHC2CQ9Y4E1 1318 aa21.69■■□□□ 1.06
COL4A2-201ENST00000360467 ANO8Q9HCE9 1232 aaPredicted RBP21.68■■□□□ 1.06
COL4A2-201ENST00000360467 PDE4CQ08493 712 aa21.68■■□□□ 1.06
COL4A2-201ENST00000360467 EFCAB2Q5VUJ9 269 aa21.68■■□□□ 1.06
COL4A2-201ENST00000360467 MPHOSPH9Q99550 1183 aa21.67■■□□□ 1.06
COL4A2-201ENST00000360467 AMPHP49418 695 aa21.67■■□□□ 1.06
COL4A2-201ENST00000360467 NOL8Q76FK4 1167 aaKnown RBP21.66■■□□□ 1.06
COL4A2-201ENST00000360467 MSH5O43196 834 aa21.66■■□□□ 1.06
COL4A2-201ENST00000360467 HSP90B1P14625 803 aaKnown RBP21.66■■□□□ 1.06
COL4A2-201ENST00000360467 TRIM6-TRIM34B2RNG4 842 aa21.65■■□□□ 1.06
COL4A2-201ENST00000360467 SPAG9O60271 1321 aaKnown RBP21.64■■□□□ 1.06
COL4A2-201ENST00000360467 IPO8O15397 1037 aaKnown RBP21.63■■□□□ 1.05
COL4A2-201ENST00000360467 TRAK1Q9UPV9 953 aa21.63■■□□□ 1.05
COL4A2-201ENST00000360467 STK31Q9BXU1 1019 aa21.63■■□□□ 1.05
COL4A2-201ENST00000360467 GTF2E1P29083 439 aaPredicted RBP21.6■■□□□ 1.05
COL4A2-201ENST00000360467 CLUAP1Q96AJ1 413 aa21.6■■□□□ 1.05
COL4A2-201ENST00000360467 FRAT2O75474 233 aaPredicted RBP21.6■■□□□ 1.05
COL4A2-201ENST00000360467 SMC4Q9NTJ3 1288 aa21.6■■□□□ 1.05
COL4A2-201ENST00000360467 FOXD4L1Q9NU39 408 aa21.59■■□□□ 1.05
COL4A2-201ENST00000360467 PDS5BQ9NTI5 1447 aa21.59■■□□□ 1.05
COL4A2-201ENST00000360467 NRDCO43847 1150 aa21.58■■□□□ 1.05
COL4A2-201ENST00000360467 CCDC88BA6NC98 1476 aa21.58■■□□□ 1.04
COL4A2-201ENST00000360467 RRP7AQ9Y3A4 280 aaKnown RBP21.58■■□□□ 1.04
COL4A2-201ENST00000360467 TOMM22Q9NS69 142 aa21.57■■□□□ 1.04
COL4A2-201ENST00000360467 EVA1CP58658 441 aa21.57■■□□□ 1.04
COL4A2-201ENST00000360467 GZF1Q9H116 711 aaPredicted RBP21.57■■□□□ 1.04
COL4A2-201ENST00000360467 CYB5RLQ6IPT4 315 aa21.57■■□□□ 1.04
COL4A2-201ENST00000360467 NGEFQ8N5V2 710 aa21.57■■□□□ 1.04
COL4A2-201ENST00000360467 ANKRD30AQ9BXX3 1397 aa21.57■■□□□ 1.04
COL4A2-201ENST00000360467 MFAP1P55081 439 aaKnown RBP21.56■■□□□ 1.04
COL4A2-201ENST00000360467 CREBRFQ8IUR6 639 aa21.56■■□□□ 1.04
COL4A2-201ENST00000360467 VPS53Q5VIR6 699 aa21.56■■□□□ 1.04
COL4A2-201ENST00000360467 PRM3Q9NNZ6 103 aa21.56■■□□□ 1.04
COL4A2-201ENST00000360467 CALD1Q05682 793 aaKnown RBP21.56■■□□□ 1.04
COL4A2-201ENST00000360467 EIF3AQ14152 1382 aaKnown RBP21.54■■□□□ 1.04
COL4A2-201ENST00000360467 TERF2IPQ9NYB0 399 aa21.54■■□□□ 1.04
COL4A2-201ENST00000360467 RCAN3Q9UKA8 241 aa21.54■■□□□ 1.04
COL4A2-201ENST00000360467 AEBP2Q6ZN18 517 aaPredicted RBP21.54■■□□□ 1.04
COL4A2-201ENST00000360467 MEX3CQ5U5Q3 659 aaKnown RBP21.53■■□□□ 1.04
COL4A2-201ENST00000360467 SLKQ9H2G2 1235 aaPredicted RBP21.53■■□□□ 1.04
COL4A2-201ENST00000360467 RAB3GAP2Q9H2M9 1393 aa21.52■■□□□ 1.04
COL4A2-201ENST00000360467 FHOD3Q2V2M9 1422 aa21.52■■□□□ 1.03
COL4A2-201ENST00000360467 GPATCH3Q96I76 525 aa21.51■■□□□ 1.03
COL4A2-201ENST00000360467 ARID3AQ99856 593 aa21.51■■□□□ 1.03
COL4A2-201ENST00000360467 ELL2O00472 640 aaPredicted RBP21.5■■□□□ 1.03
COL4A2-201ENST00000360467 FOXD4L5Q5VV16 416 aaPredicted RBP21.5■■□□□ 1.03
COL4A2-201ENST00000360467 FOXD4L4Q8WXT5 416 aaPredicted RBP21.5■■□□□ 1.03
COL4A2-201ENST00000360467 RASSF8Q8NHQ8 419 aa21.49■■□□□ 1.03
COL4A2-201ENST00000360467 RWDD1Q9H446 243 aaPredicted RBP21.49■■□□□ 1.03
COL4A2-201ENST00000360467 MSNP26038 577 aaKnown RBP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms