RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 SETD5Q9C0A6 1442 aa20.77■□□□□ 0.92
UBAP1-202ENST00000359544 CDK13Q14004 1512 aaKnown RBP20.76■□□□□ 0.91
UBAP1-202ENST00000359544 FMN1Q68DA7 1419 aa20.75■□□□□ 0.91
UBAP1-202ENST00000359544 WDR7Q9Y4E6 1490 aa20.74■□□□□ 0.91
UBAP1-202ENST00000359544 TSPOAP1O95153 1857 aa20.73■□□□□ 0.91
UBAP1-202ENST00000359544 EPRSP07814 1512 aaKnown RBP20.73■□□□□ 0.91
UBAP1-202ENST00000359544 ERICH6BQ5W0A0 696 aa20.73■□□□□ 0.91
UBAP1-202ENST00000359544 PRKCSHP14314 528 aaPredicted RBP20.71■□□□□ 0.91
UBAP1-202ENST00000359544 PCF11O94913 1555 aaKnown RBP20.68■□□□□ 0.9
UBAP1-202ENST00000359544 MAP3K1Q13233 1512 aa20.68■□□□□ 0.9
UBAP1-202ENST00000359544 DEKP35659 375 aaKnown RBP20.66■□□□□ 0.9
UBAP1-202ENST00000359544 PLEKHD1A6NEE1 506 aa20.66■□□□□ 0.9
UBAP1-202ENST00000359544 SIN3AQ96ST3 1273 aa20.65■□□□□ 0.9
UBAP1-202ENST00000359544 LRRIQ1Q96JM4 1722 aa20.64■□□□□ 0.89
UBAP1-202ENST00000359544 HECW1Q76N89 1606 aa20.63■□□□□ 0.89
UBAP1-202ENST00000359544 CASKIN1Q8WXD9 1431 aa20.62■□□□□ 0.89
UBAP1-202ENST00000359544 TIAM1Q13009 1591 aa20.62■□□□□ 0.89
UBAP1-202ENST00000359544 PPP4R2Q9NY27 417 aa20.6■□□□□ 0.89
UBAP1-202ENST00000359544 GLI2P10070 1586 aa20.59■□□□□ 0.89
UBAP1-202ENST00000359544 CD109Q6YHK3 1445 aa20.59■□□□□ 0.89
UBAP1-202ENST00000359544 HNRNPUQ00839 825 aaKnown RBP eCLIP20.57■□□□□ 0.88
UBAP1-202ENST00000359544 PPRC1Q5VV67 1664 aaKnown RBP20.57■□□□□ 0.88
UBAP1-202ENST00000359544 MAP3K4Q9Y6R4 1608 aa20.57■□□□□ 0.88
UBAP1-202ENST00000359544 HIRIP3Q9BW71 556 aaPredicted RBP20.55■□□□□ 0.88
UBAP1-202ENST00000359544 FYCO1Q9BQS8 1478 aa20.55■□□□□ 0.88
UBAP1-202ENST00000359544 MAGI3Q5TCQ9 1506 aa20.53■□□□□ 0.88
UBAP1-202ENST00000359544 LRRC9Q6ZRR7 1453 aa20.53■□□□□ 0.88
UBAP1-202ENST00000359544 IRX6P78412 446 aaPredicted RBP20.53■□□□□ 0.88
UBAP1-202ENST00000359544 COL17A1Q9UMD9 1497 aaPredicted RBP20.5■□□□□ 0.87
UBAP1-202ENST00000359544 KIF14Q15058 1648 aa20.5■□□□□ 0.87
UBAP1-202ENST00000359544 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.5■□□□□ 0.87
UBAP1-202ENST00000359544 NOP58Q9Y2X3 529 aaKnown RBP20.5■□□□□ 0.87
UBAP1-202ENST00000359544 TTC37Q6PGP7 1564 aa20.49■□□□□ 0.87
UBAP1-202ENST00000359544 TONSLQ96HA7 1378 aa20.49■□□□□ 0.87
UBAP1-202ENST00000359544 PHLDB1Q86UU1 1377 aa20.48■□□□□ 0.87
UBAP1-202ENST00000359544 ABCA9Q8IUA7 1624 aa20.48■□□□□ 0.87
UBAP1-202ENST00000359544 CFAP43Q8NDM7 1665 aa20.47■□□□□ 0.87
UBAP1-202ENST00000359544 CCDC18Q5T9S5 1454 aa20.47■□□□□ 0.87
UBAP1-202ENST00000359544 TROQ12816 1431 aaPredicted RBP20.47■□□□□ 0.87
UBAP1-202ENST00000359544 FAM50AQ14320 339 aaKnown RBP20.46■□□□□ 0.87
UBAP1-202ENST00000359544 KDM6BO15054 1643 aa20.46■□□□□ 0.87
UBAP1-202ENST00000359544 TEX14Q8IWB6 1497 aa20.43■□□□□ 0.86
UBAP1-202ENST00000359544 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.42■□□□□ 0.86
UBAP1-202ENST00000359544 RAPGEF3O95398 923 aa20.41■□□□□ 0.86
UBAP1-202ENST00000359544 MTUS2Q5JR59 1369 aa20.41■□□□□ 0.86
UBAP1-202ENST00000359544 NBR1Q14596 966 aa20.36■□□□□ 0.85
UBAP1-202ENST00000359544 FANCAO15360 1455 aa20.36■□□□□ 0.85
UBAP1-202ENST00000359544 ZNF777Q9ULD5 760 aaPredicted RBP20.35■□□□□ 0.85
UBAP1-202ENST00000359544 PLCH2O75038 1416 aa20.34■□□□□ 0.85
UBAP1-202ENST00000359544 B4GALNT3Q6L9W6 998 aa20.34■□□□□ 0.85
UBAP1-202ENST00000359544 RTL5Q5HYW3 569 aaPredicted RBP20.33■□□□□ 0.85
UBAP1-202ENST00000359544 AKNAQ7Z591 1439 aa20.32■□□□□ 0.84
UBAP1-202ENST00000359544 ARHGAP5Q13017 1502 aa20.31■□□□□ 0.84
UBAP1-202ENST00000359544 ZBED9Q6R2W3 1325 aa20.31■□□□□ 0.84
UBAP1-202ENST00000359544 PAK3O75914 559 aaPredicted RBP20.3■□□□□ 0.84
UBAP1-202ENST00000359544 EFCAB2Q5VUJ9 269 aa20.3■□□□□ 0.84
UBAP1-202ENST00000359544 ANP32AP39687 249 aaKnown RBP20.29■□□□□ 0.84
UBAP1-202ENST00000359544 MYO5CQ9NQX4 1742 aa20.29■□□□□ 0.84
UBAP1-202ENST00000359544 NCOA2Q15596 1464 aa20.29■□□□□ 0.84
UBAP1-202ENST00000359544 NEO1Q92859 1461 aa20.28■□□□□ 0.84
UBAP1-202ENST00000359544 CNTLNQ9NXG0 1405 aa20.27■□□□□ 0.84
UBAP1-202ENST00000359544 IPO9Q96P70 1041 aaKnown RBP20.27■□□□□ 0.84
UBAP1-202ENST00000359544 ANO8Q9HCE9 1232 aaPredicted RBP20.27■□□□□ 0.84
UBAP1-202ENST00000359544 SCAPERQ9BY12 1400 aa20.26■□□□□ 0.83
UBAP1-202ENST00000359544 ZNF644Q9H582 1327 aaPredicted RBP20.26■□□□□ 0.83
UBAP1-202ENST00000359544 EHBP1L1Q8N3D4 1523 aa20.26■□□□□ 0.83
UBAP1-202ENST00000359544 GPATCH8Q9UKJ3 1502 aaKnown RBP20.26■□□□□ 0.83
UBAP1-202ENST00000359544 CDC42BPBQ9Y5S2 1711 aa20.26■□□□□ 0.83
UBAP1-202ENST00000359544 ADGRL1O94910 1474 aa20.26■□□□□ 0.83
UBAP1-202ENST00000359544 ARAP3Q8WWN8 1544 aa20.26■□□□□ 0.83
UBAP1-202ENST00000359544 WASHC2AQ641Q2 1341 aa20.25■□□□□ 0.83
UBAP1-202ENST00000359544 CFDP1Q9UEE9 299 aaPredicted RBP20.24■□□□□ 0.83
UBAP1-202ENST00000359544 CDC42BPAQ5VT25 1732 aa20.24■□□□□ 0.83
UBAP1-202ENST00000359544 AFAP1Q8N556 730 aa20.24■□□□□ 0.83
UBAP1-202ENST00000359544 HFM1A2PYH4 1435 aa20.24■□□□□ 0.83
UBAP1-202ENST00000359544 ZBTB47Q9UFB7 747 aaPredicted RBP20.22■□□□□ 0.83
UBAP1-202ENST00000359544 DENND4BO75064 1496 aaPredicted RBP20.22■□□□□ 0.83
UBAP1-202ENST00000359544 FRMPD1Q5SYB0 1578 aa20.22■□□□□ 0.83
UBAP1-202ENST00000359544 PTPN23Q9H3S7 1636 aa20.22■□□□□ 0.83
UBAP1-202ENST00000359544 PREX2Q70Z35 1606 aa20.21■□□□□ 0.83
UBAP1-202ENST00000359544 HNRNPMP52272 730 aaKnown RBP eCLIP20.21■□□□□ 0.83
UBAP1-202ENST00000359544 ARHGEF12Q9NZN5 1544 aa20.2■□□□□ 0.82
UBAP1-202ENST00000359544 HSPA5P11021 654 aaKnown RBP20.2■□□□□ 0.82
UBAP1-202ENST00000359544 FGD6Q6ZV73 1430 aa20.19■□□□□ 0.82
UBAP1-202ENST00000359544 CFAP74Q9C0B2 1584 aa20.17■□□□□ 0.82
UBAP1-202ENST00000359544 SUPT6HQ7KZ85 1726 aaKnown RBP20.17■□□□□ 0.82
UBAP1-202ENST00000359544 TRAPPC8Q9Y2L5 1435 aa20.17■□□□□ 0.82
UBAP1-202ENST00000359544 FAM9BQ8IZU0 186 aa20.17■□□□□ 0.82
UBAP1-202ENST00000359544 PRKRIP1Q9H875 184 aaPredicted RBP20.17■□□□□ 0.82
UBAP1-202ENST00000359544 EIF4G2P78344 907 aaKnown RBP eCLIP20.16■□□□□ 0.827e-7■■■■■ 38.3
UBAP1-202ENST00000359544 MRS2Q9HD23 443 aa20.16■□□□□ 0.82
UBAP1-202ENST00000359544 SAMD9LQ8IVG5 1584 aa20.16■□□□□ 0.82
UBAP1-202ENST00000359544 CCDC184Q52MB2 194 aa20.15■□□□□ 0.82
UBAP1-202ENST00000359544 RICTORQ6R327 1708 aa20.15■□□□□ 0.82
UBAP1-202ENST00000359544 POGZQ7Z3K3 1410 aa20.15■□□□□ 0.82
UBAP1-202ENST00000359544 SMG6Q86US8 1419 aaKnown RBP20.15■□□□□ 0.82
UBAP1-202ENST00000359544 YEATS2Q9ULM3 1422 aa20.15■□□□□ 0.82
UBAP1-202ENST00000359544 SALL2Q9Y467 1007 aaPredicted RBP20.15■□□□□ 0.82
UBAP1-202ENST00000359544 SYCP2Q9BX26 1530 aa20.12■□□□□ 0.81
UBAP1-202ENST00000359544 CCDC136Q96JN2 1154 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms