RNA–Protein interactions for RNA: ENST00000359446.9

LDLRAD4-201, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,486 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-201ENST00000359446 MORC1Q86VD1 984 aa16.18■□□□□ 0.18
LDLRAD4-201ENST00000359446 APBB1O00213 710 aa16.17■□□□□ 0.18
LDLRAD4-201ENST00000359446 PAK3O75914 559 aaPredicted RBP16.17■□□□□ 0.18
LDLRAD4-201ENST00000359446 ZNF330Q9Y3S2 320 aaPredicted RBP16.17■□□□□ 0.18
LDLRAD4-201ENST00000359446 CCNB3Q8WWL7 1395 aa16.16■□□□□ 0.18
LDLRAD4-201ENST00000359446 NOC3LQ8WTT2 800 aaKnown RBP16.16■□□□□ 0.18
LDLRAD4-201ENST00000359446 SIN3AQ96ST3 1273 aa16.16■□□□□ 0.18
LDLRAD4-201ENST00000359446 CFAP44Q96MT7 982 aa16.15■□□□□ 0.18
LDLRAD4-201ENST00000359446 TMX4Q9H1E5 349 aaPredicted RBP16.14■□□□□ 0.17
LDLRAD4-201ENST00000359446 STK26Q9P289 416 aa16.14■□□□□ 0.17
LDLRAD4-201ENST00000359446 CEP164Q9UPV0 1460 aa16.14■□□□□ 0.17
LDLRAD4-201ENST00000359446 WRNQ14191 1432 aaPredicted RBP eCLIP16.13■□□□□ 0.17
LDLRAD4-201ENST00000359446 PRM3Q9NNZ6 103 aa16.12■□□□□ 0.17
LDLRAD4-201ENST00000359446 AMER1Q5JTC6 1135 aaPredicted RBP16.11■□□□□ 0.17
LDLRAD4-201ENST00000359446 CSB-PGBD3P0DP91 1061 aa16.09■□□□□ 0.17
LDLRAD4-201ENST00000359446 IPO8O15397 1037 aaKnown RBP16.09■□□□□ 0.17
LDLRAD4-201ENST00000359446 HDGFL2Q7Z4V5 671 aaPredicted RBP16.09■□□□□ 0.17
LDLRAD4-201ENST00000359446 CHMP3Q9Y3E7 222 aa16.08■□□□□ 0.16
LDLRAD4-201ENST00000359446 FHAD1B1AJZ9 1412 aa16.07■□□□□ 0.16
LDLRAD4-201ENST00000359446 GORABQ5T7V8 394 aa16.06■□□□□ 0.16
LDLRAD4-201ENST00000359446 CALD1Q05682 793 aaKnown RBP16.05■□□□□ 0.16
LDLRAD4-201ENST00000359446 GGT6Q6P531 493 aa16.05■□□□□ 0.16
LDLRAD4-201ENST00000359446 ITPRIPQ8IWB1 547 aa16.04■□□□□ 0.16
LDLRAD4-201ENST00000359446 TAF7LQ5H9L4 462 aa16.04■□□□□ 0.16
LDLRAD4-201ENST00000359446 GPATCH3Q96I76 525 aa16.04■□□□□ 0.16
LDLRAD4-201ENST00000359446 KTN1Q86UP2 1357 aaKnown RBP16.04■□□□□ 0.16
LDLRAD4-201ENST00000359446 GBP4Q96PP9 640 aa16.04■□□□□ 0.16
LDLRAD4-201ENST00000359446 CCDC9Q9Y3X0 531 aaKnown RBP16.03■□□□□ 0.16
LDLRAD4-201ENST00000359446 MYO15BQ96JP2 1530 aa16.03■□□□□ 0.16
LDLRAD4-201ENST00000359446 HTATSF1O43719 755 aaKnown RBP16.03■□□□□ 0.16
LDLRAD4-201ENST00000359446 G3V3G9 751 aa16.03■□□□□ 0.16
LDLRAD4-201ENST00000359446 DCAF8Q5TAQ9 597 aa16.03■□□□□ 0.16
LDLRAD4-201ENST00000359446 SPAG9O60271 1321 aaKnown RBP16.02■□□□□ 0.16
LDLRAD4-201ENST00000359446 HSP90B1P14625 803 aaKnown RBP16.01■□□□□ 0.15
LDLRAD4-201ENST00000359446 PDE4CQ08493 712 aa16.01■□□□□ 0.15
LDLRAD4-201ENST00000359446 U2AF1L5P0DN76 240 aaPredicted RBP16.01■□□□□ 0.15
LDLRAD4-201ENST00000359446 U2AF1Q01081 240 aaKnown RBP eCLIP16.01■□□□□ 0.15
LDLRAD4-201ENST00000359446 GZF1Q9H116 711 aaPredicted RBP16.01■□□□□ 0.15
LDLRAD4-201ENST00000359446 TPM4P67936 248 aa16.01■□□□□ 0.15
LDLRAD4-201ENST00000359446 PTMSP20962 102 aa16■□□□□ 0.15
LDLRAD4-201ENST00000359446 TRIM6-TRIM34B2RNG4 842 aa16■□□□□ 0.15
LDLRAD4-201ENST00000359446 ROCK2O75116 1388 aaKnown RBP16■□□□□ 0.15
LDLRAD4-201ENST00000359446 SYAP1Q96A49 352 aaPredicted RBP16■□□□□ 0.15
LDLRAD4-201ENST00000359446 A0A0U1RQG5 324 aaPredicted RBP15.99■□□□□ 0.15
LDLRAD4-201ENST00000359446 CCDC34Q96HJ3 373 aa15.99■□□□□ 0.15
LDLRAD4-201ENST00000359446 RASSF8Q8NHQ8 419 aa15.98■□□□□ 0.15
LDLRAD4-201ENST00000359446 ARID3AQ99856 593 aa15.98■□□□□ 0.15
LDLRAD4-201ENST00000359446 TNIKQ9UKE5 1360 aa15.98■□□□□ 0.15
LDLRAD4-201ENST00000359446 ARHGAP35Q9NRY4 1499 aa15.97■□□□□ 0.15
LDLRAD4-201ENST00000359446 CREBRFQ8IUR6 639 aa15.97■□□□□ 0.15
LDLRAD4-201ENST00000359446 STK31Q9BXU1 1019 aa15.97■□□□□ 0.15
LDLRAD4-201ENST00000359446 RWDD1Q9H446 243 aaPredicted RBP15.96■□□□□ 0.14
LDLRAD4-201ENST00000359446 NACADO15069 1562 aa15.95■□□□□ 0.14
LDLRAD4-201ENST00000359446 SLKQ9H2G2 1235 aaPredicted RBP15.95■□□□□ 0.14
LDLRAD4-201ENST00000359446 CHMP4AQ9BY43 222 aa15.94■□□□□ 0.14
LDLRAD4-201ENST00000359446 DEKP35659 375 aaKnown RBP15.94■□□□□ 0.14
LDLRAD4-201ENST00000359446 VPS53Q5VIR6 699 aa15.93■□□□□ 0.14
LDLRAD4-201ENST00000359446 FOXD1Q16676 465 aa15.93■□□□□ 0.14
LDLRAD4-201ENST00000359446 RCAN3Q9UKA8 241 aa15.93■□□□□ 0.14
LDLRAD4-201ENST00000359446 FRAT2O75474 233 aaPredicted RBP15.92■□□□□ 0.14
LDLRAD4-201ENST00000359446 GOLGA6L1Q8N7Z2 621 aa15.92■□□□□ 0.14
LDLRAD4-201ENST00000359446 SLC4A10Q6U841 1118 aa15.92■□□□□ 0.14
LDLRAD4-201ENST00000359446 EIF3AQ14152 1382 aaKnown RBP15.92■□□□□ 0.14
LDLRAD4-201ENST00000359446 PKD2Q13563 968 aa15.92■□□□□ 0.14
LDLRAD4-201ENST00000359446 SMC4Q9NTJ3 1288 aa15.92■□□□□ 0.14
LDLRAD4-201ENST00000359446 MFAP1P55081 439 aaKnown RBP15.9■□□□□ 0.14
LDLRAD4-201ENST00000359446 CSPP1Q1MSJ5 1256 aa15.9■□□□□ 0.14
LDLRAD4-201ENST00000359446 CEP89Q96ST8 783 aa15.9■□□□□ 0.14
LDLRAD4-201ENST00000359446 CUX2O14529 1486 aa15.9■□□□□ 0.14
LDLRAD4-201ENST00000359446 HSPA5P11021 654 aaKnown RBP15.9■□□□□ 0.14
LDLRAD4-201ENST00000359446 HMMRO75330 724 aa15.9■□□□□ 0.14
LDLRAD4-201ENST00000359446 PMFBP1Q8TBY8 1022 aa15.9■□□□□ 0.14
LDLRAD4-201ENST00000359446 HDAC5Q9UQL6 1122 aa15.9■□□□□ 0.14
LDLRAD4-201ENST00000359446 GTF2E1P29083 439 aaPredicted RBP15.89■□□□□ 0.13
LDLRAD4-201ENST00000359446 SETD5Q9C0A6 1442 aa15.89■□□□□ 0.13
LDLRAD4-201ENST00000359446 ANO8Q9HCE9 1232 aaPredicted RBP15.88■□□□□ 0.13
LDLRAD4-201ENST00000359446 NOL8Q76FK4 1167 aaKnown RBP15.88■□□□□ 0.13
LDLRAD4-201ENST00000359446 TOMM22Q9NS69 142 aa15.88■□□□□ 0.13
LDLRAD4-201ENST00000359446 MARCH6O60337 910 aa15.87■□□□□ 0.13
LDLRAD4-201ENST00000359446 CCER2I3L3R5 266 aa15.87■□□□□ 0.13
LDLRAD4-201ENST00000359446 CARMIL1Q5VZK9 1371 aa15.87■□□□□ 0.13
LDLRAD4-201ENST00000359446 NGDNQ8NEJ9 315 aaKnown RBP15.86■□□□□ 0.13
LDLRAD4-201ENST00000359446 TERF2IPQ9NYB0 399 aa15.86■□□□□ 0.13
LDLRAD4-201ENST00000359446 AMPHP49418 695 aa15.85■□□□□ 0.13
LDLRAD4-201ENST00000359446 RALBP1Q15311 655 aa15.85■□□□□ 0.13
LDLRAD4-201ENST00000359446 EID1Q9Y6B2 187 aa15.85■□□□□ 0.13
LDLRAD4-201ENST00000359446 PES1O00541 588 aaKnown RBP15.85■□□□□ 0.13
LDLRAD4-201ENST00000359446 TNNT3P45378 269 aaPredicted RBP15.85■□□□□ 0.13
LDLRAD4-201ENST00000359446 CARMIL2Q6F5E8 1435 aa15.85■□□□□ 0.13
LDLRAD4-201ENST00000359446 LTV1Q96GA3 475 aaPredicted RBP15.85■□□□□ 0.13
LDLRAD4-201ENST00000359446 KIF16BQ96L93 1317 aa15.85■□□□□ 0.13
LDLRAD4-201ENST00000359446 PHF14O94880 888 aa15.84■□□□□ 0.13
LDLRAD4-201ENST00000359446 BAZ1AQ9NRL2 1556 aaPredicted RBP15.84■□□□□ 0.13
LDLRAD4-201ENST00000359446 RBM19Q9Y4C8 960 aaKnown RBP15.84■□□□□ 0.13
LDLRAD4-201ENST00000359446 NUP155O75694 1391 aa15.83■□□□□ 0.12
LDLRAD4-201ENST00000359446 SF3A1Q15459 793 aaKnown RBP15.83■□□□□ 0.12
LDLRAD4-201ENST00000359446 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.83■□□□□ 0.12
LDLRAD4-201ENST00000359446 TPM3P06753 285 aa15.83■□□□□ 0.12
LDLRAD4-201ENST00000359446 FOXD4L1Q9NU39 408 aa15.83■□□□□ 0.12
LDLRAD4-201ENST00000359446 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.82■□□□□ 0.121e-6■■■□□ 18.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms