RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 HECW1Q76N89 1606 aa7.57□□□□□ -1.2
ATXN3-202ENST00000359366 PRKCSHP14314 528 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-202ENST00000359366 NUP153P49790 1475 aaKnown RBP7.56□□□□□ -1.2
ATXN3-202ENST00000359366 PRG4Q92954 1404 aaPredicted RBP7.56□□□□□ -1.2
ATXN3-202ENST00000359366 ERCC6L2Q5T890 1561 aa7.55□□□□□ -1.2
ATXN3-202ENST00000359366 FGD6Q6ZV73 1430 aa7.55□□□□□ -1.2
ATXN3-202ENST00000359366 RAPGEF6Q8TEU7 1601 aa7.55□□□□□ -1.2
ATXN3-202ENST00000359366 CHIC2Q9UKJ5 165 aa7.55□□□□□ -1.2
ATXN3-202ENST00000359366 CARMIL2Q6F5E8 1435 aa7.54□□□□□ -1.2
ATXN3-202ENST00000359366 CCDC18Q5T9S5 1454 aa7.54□□□□□ -1.2
ATXN3-202ENST00000359366 SUPT6HQ7KZ85 1726 aaKnown RBP7.54□□□□□ -1.2
ATXN3-202ENST00000359366 RAB3GAP2Q9H2M9 1393 aa7.53□□□□□ -1.2
ATXN3-202ENST00000359366 PTPRKQ15262 1439 aa7.53□□□□□ -1.2
ATXN3-202ENST00000359366 SAMD1Q6SPF0 538 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-202ENST00000359366 EHBP1L1Q8N3D4 1523 aa7.53□□□□□ -1.2
ATXN3-202ENST00000359366 DHX57Q6P158 1386 aaKnown RBP7.53□□□□□ -1.2
ATXN3-202ENST00000359366 ZNF644Q9H582 1327 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-202ENST00000359366 GABBR2O75899 941 aa7.53□□□□□ -1.2
ATXN3-202ENST00000359366 MYOM3Q5VTT5 1437 aa7.52□□□□□ -1.21
ATXN3-202ENST00000359366 PITPNM1O00562 1244 aa7.52□□□□□ -1.21
ATXN3-202ENST00000359366 SLC4A1APQ9BWU0 796 aaKnown RBP7.52□□□□□ -1.21
ATXN3-202ENST00000359366 RRP7BPQ9NSQ0 103 aa7.51□□□□□ -1.21
ATXN3-202ENST00000359366 PTPRGP23470 1445 aa7.51□□□□□ -1.21
ATXN3-202ENST00000359366 ZNF777Q9ULD5 760 aaPredicted RBP7.51□□□□□ -1.21
ATXN3-202ENST00000359366 PTPN23Q9H3S7 1636 aa7.5□□□□□ -1.21
ATXN3-202ENST00000359366 SETD5Q9C0A6 1442 aa7.5□□□□□ -1.21
ATXN3-202ENST00000359366 KIF14Q15058 1648 aa7.49□□□□□ -1.21
ATXN3-202ENST00000359366 POLA2Q14181 598 aa7.49□□□□□ -1.21
ATXN3-202ENST00000359366 ARHGEF11O15085 1522 aa7.49□□□□□ -1.21
ATXN3-202ENST00000359366 CDK11AQ9UQ88 783 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-202ENST00000359366 ATP10BO94823 1461 aa7.48□□□□□ -1.21
ATXN3-202ENST00000359366 ABCA8O94911 1581 aa7.48□□□□□ -1.21
ATXN3-202ENST00000359366 NEUROD1Q13562 356 aa7.47□□□□□ -1.21
ATXN3-202ENST00000359366 SIN3AQ96ST3 1273 aa7.47□□□□□ -1.21
ATXN3-202ENST00000359366 PCDH10Q9P2E7 1040 aa7.47□□□□□ -1.21
ATXN3-202ENST00000359366 TROQ12816 1431 aaPredicted RBP7.46□□□□□ -1.21
ATXN3-202ENST00000359366 PLEKHD1A6NEE1 506 aa7.46□□□□□ -1.21
ATXN3-202ENST00000359366 SHROOM2Q13796 1616 aa7.46□□□□□ -1.22
ATXN3-202ENST00000359366 POTEMA6NI47 508 aa7.46□□□□□ -1.22
ATXN3-202ENST00000359366 KCNH8Q96L42 1107 aa7.46□□□□□ -1.22
ATXN3-202ENST00000359366 CFDP1Q9UEE9 299 aaPredicted RBP7.46□□□□□ -1.22
ATXN3-202ENST00000359366 MAPKBP1O60336 1514 aa7.45□□□□□ -1.22
ATXN3-202ENST00000359366 CLASP1Q7Z460 1538 aa7.45□□□□□ -1.22
ATXN3-202ENST00000359366 KDM6BO15054 1643 aa7.44□□□□□ -1.22
ATXN3-202ENST00000359366 UACAQ9BZF9 1416 aa7.44□□□□□ -1.22
ATXN3-202ENST00000359366 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.44□□□□□ -1.22
ATXN3-202ENST00000359366 ZBTB22O15209 634 aa7.44□□□□□ -1.22
ATXN3-202ENST00000359366 NAIPQ13075 1403 aa7.43□□□□□ -1.22
ATXN3-202ENST00000359366 GPATCH8Q9UKJ3 1502 aaKnown RBP7.43□□□□□ -1.22
ATXN3-202ENST00000359366 TCOF1Q13428 1488 aaKnown RBP7.43□□□□□ -1.22
ATXN3-202ENST00000359366 C19orf67A6NJJ6 358 aa7.43□□□□□ -1.22
ATXN3-202ENST00000359366 TRIM52Q96A61 297 aa7.43□□□□□ -1.22
ATXN3-202ENST00000359366 HFM1A2PYH4 1435 aa7.42□□□□□ -1.22
ATXN3-202ENST00000359366 ABCC5O15440 1437 aa7.42□□□□□ -1.22
ATXN3-202ENST00000359366 MIA2Q96PC5 1412 aa7.42□□□□□ -1.22
ATXN3-202ENST00000359366 CAMSAP2Q08AD1 1489 aa7.41□□□□□ -1.22
ATXN3-202ENST00000359366 HNRNPMP52272 730 aaKnown RBP eCLIP7.41□□□□□ -1.22
ATXN3-202ENST00000359366 DAPK1P53355 1430 aa7.41□□□□□ -1.22
ATXN3-202ENST00000359366 CDC42BPAQ5VT25 1732 aa7.41□□□□□ -1.22
ATXN3-202ENST00000359366 OSCARQ8IYS5 282 aa7.4□□□□□ -1.22
ATXN3-202ENST00000359366 SLC4A2P04920 1241 aa7.4□□□□□ -1.23
ATXN3-202ENST00000359366 DAXXQ9UER7 740 aaPredicted RBP7.4□□□□□ -1.23
ATXN3-202ENST00000359366 ABCC10Q5T3U5 1492 aa7.4□□□□□ -1.23
ATXN3-202ENST00000359366 ABCC2Q92887 1545 aa7.39□□□□□ -1.23
ATXN3-202ENST00000359366 ADCY10Q96PN6 1610 aa7.39□□□□□ -1.23
ATXN3-202ENST00000359366 ZNF316A6NFI3 1004 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-202ENST00000359366 POTEGQ6S5H5 508 aa7.39□□□□□ -1.23
ATXN3-202ENST00000359366 TTC37Q6PGP7 1564 aa7.38□□□□□ -1.23
ATXN3-202ENST00000359366 DIEXFQ68CQ4 756 aaKnown RBP7.38□□□□□ -1.23
ATXN3-202ENST00000359366 DNMT1P26358 1616 aaKnown RBP7.38□□□□□ -1.23
ATXN3-202ENST00000359366 CLSPNQ9HAW4 1339 aa7.38□□□□□ -1.23
ATXN3-202ENST00000359366 ITSN2Q9NZM3 1697 aa7.38□□□□□ -1.23
ATXN3-202ENST00000359366 ZCCHC11Q5TAX3 1644 aaKnown RBP7.38□□□□□ -1.23
ATXN3-202ENST00000359366 ZBTB12Q9Y330 459 aaPredicted RBP7.37□□□□□ -1.23
ATXN3-202ENST00000359366 CDC42BPBQ9Y5S2 1711 aa7.36□□□□□ -1.23
ATXN3-202ENST00000359366 HIRIP3Q9BW71 556 aaPredicted RBP7.36□□□□□ -1.23
ATXN3-202ENST00000359366 GCC2Q8IWJ2 1684 aa7.36□□□□□ -1.23
ATXN3-202ENST00000359366 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.36□□□□□ -1.23
ATXN3-202ENST00000359366 AKNAQ7Z591 1439 aa7.35□□□□□ -1.23
ATXN3-202ENST00000359366 DENND4BO75064 1496 aaPredicted RBP7.35□□□□□ -1.23
ATXN3-202ENST00000359366 BCL11AQ9H165 835 aa7.35□□□□□ -1.23
ATXN3-202ENST00000359366 ARHGAP5Q13017 1502 aa7.35□□□□□ -1.23
ATXN3-202ENST00000359366 MPHOSPH9Q99550 1183 aa7.35□□□□□ -1.23
ATXN3-202ENST00000359366 SAMD9LQ8IVG5 1584 aa7.34□□□□□ -1.23
ATXN3-202ENST00000359366 PRKAR2AP13861 404 aaKnown RBP7.34□□□□□ -1.23
ATXN3-202ENST00000359366 NCOA1Q15788 1441 aa7.34□□□□□ -1.23
ATXN3-202ENST00000359366 C9orf84Q5VXU9 1444 aa7.33□□□□□ -1.24
ATXN3-202ENST00000359366 SYCP2Q9BX26 1530 aa7.33□□□□□ -1.24
ATXN3-202ENST00000359366 KDM5BQ9UGL1 1544 aa7.33□□□□□ -1.24
ATXN3-202ENST00000359366 PREX2Q70Z35 1606 aa7.33□□□□□ -1.24
ATXN3-202ENST00000359366 TSPY4P0CV99 314 aa7.33□□□□□ -1.24
ATXN3-202ENST00000359366 TSPY10P0CW01 314 aa7.33□□□□□ -1.24
ATXN3-202ENST00000359366 CROCC2H7BZ55 1655 aa7.33□□□□□ -1.24
ATXN3-202ENST00000359366 ROCK1Q13464 1354 aa7.32□□□□□ -1.24
ATXN3-202ENST00000359366 UHRF1BP1LA0JNW5 1464 aa7.32□□□□□ -1.24
ATXN3-202ENST00000359366 MBD5Q9P267 1494 aa7.32□□□□□ -1.24
ATXN3-202ENST00000359366 TONSLQ96HA7 1378 aa7.31□□□□□ -1.24
ATXN3-202ENST00000359366 ANKRD30AQ9BXX3 1397 aa7.31□□□□□ -1.24
ATXN3-202ENST00000359366 CYB5RLQ6IPT4 315 aa7.31□□□□□ -1.24
ATXN3-202ENST00000359366 MYO5CQ9NQX4 1742 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms