RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 AEBP2Q6ZN18 517 aaPredicted RBP16.61■□□□□ 0.25
NLRC3-202ENST00000359128 G3V3G9 751 aa16.61■□□□□ 0.25
NLRC3-202ENST00000359128 MCCP23508 829 aa16.61■□□□□ 0.25
NLRC3-202ENST00000359128 RGS3P49796 1198 aa16.61■□□□□ 0.25
NLRC3-202ENST00000359128 DCAF8Q5TAQ9 597 aa16.61■□□□□ 0.25
NLRC3-202ENST00000359128 DNTTIP2Q5QJE6 756 aaKnown RBP16.6■□□□□ 0.25
NLRC3-202ENST00000359128 EFCAB2Q5VUJ9 269 aa16.6■□□□□ 0.25
NLRC3-202ENST00000359128 PLCB2Q00722 1185 aa16.59■□□□□ 0.25
NLRC3-202ENST00000359128 ARHGAP35Q9NRY4 1499 aa16.59■□□□□ 0.25
NLRC3-202ENST00000359128 GNL2Q13823 731 aaKnown RBP16.58■□□□□ 0.24
NLRC3-202ENST00000359128 GOLGA6L4A6NEF3 574 aa16.57■□□□□ 0.24
NLRC3-202ENST00000359128 SUPT16HQ9Y5B9 1047 aaKnown RBP16.56■□□□□ 0.24
NLRC3-202ENST00000359128 SOGA1O94964 1423 aa16.56■□□□□ 0.24
NLRC3-202ENST00000359128 CALD1Q05682 793 aaKnown RBP16.55■□□□□ 0.24
NLRC3-202ENST00000359128 PKD2Q13563 968 aa16.54■□□□□ 0.24
NLRC3-202ENST00000359128 TAF7LQ5H9L4 462 aa16.53■□□□□ 0.24
NLRC3-202ENST00000359128 CECR2Q9BXF3 1484 aa16.53■□□□□ 0.24
NLRC3-202ENST00000359128 EIF3AQ14152 1382 aaKnown RBP16.53■□□□□ 0.24
NLRC3-202ENST00000359128 SMARCA2P51531 1590 aa16.53■□□□□ 0.24
NLRC3-202ENST00000359128 NRDCO43847 1150 aa16.52■□□□□ 0.24
NLRC3-202ENST00000359128 ROCK2O75116 1388 aaKnown RBP16.52■□□□□ 0.24
NLRC3-202ENST00000359128 NGDNQ8NEJ9 315 aaKnown RBP16.52■□□□□ 0.24
NLRC3-202ENST00000359128 CHMP3Q9Y3E7 222 aa16.52■□□□□ 0.24
NLRC3-202ENST00000359128 SPAG9O60271 1321 aaKnown RBP16.52■□□□□ 0.24
NLRC3-202ENST00000359128 CFAP44Q96MT7 982 aa16.51■□□□□ 0.23
NLRC3-202ENST00000359128 GORABQ5T7V8 394 aa16.51■□□□□ 0.23
NLRC3-202ENST00000359128 KIF3BO15066 747 aa16.5■□□□□ 0.23
NLRC3-202ENST00000359128 WASHC2CQ9Y4E1 1318 aa16.49■□□□□ 0.23
NLRC3-202ENST00000359128 KIAA1211Q6ZU35 1233 aa16.49■□□□□ 0.23
NLRC3-202ENST00000359128 CHMP4AQ9BY43 222 aa16.49■□□□□ 0.23
NLRC3-202ENST00000359128 KTN1Q86UP2 1357 aaKnown RBP16.49■□□□□ 0.23
NLRC3-202ENST00000359128 IPO8O15397 1037 aaKnown RBP16.49■□□□□ 0.23
NLRC3-202ENST00000359128 HSCBQ8IWL3 235 aa16.49■□□□□ 0.23
NLRC3-202ENST00000359128 APBB1O00213 710 aa16.49■□□□□ 0.23
NLRC3-202ENST00000359128 ANKRD30AQ9BXX3 1397 aa16.48■□□□□ 0.23
NLRC3-202ENST00000359128 MEX3CQ5U5Q3 659 aaKnown RBP16.48■□□□□ 0.23
NLRC3-202ENST00000359128 NUTM2DQ5VT03 806 aaPredicted RBP16.47■□□□□ 0.23
NLRC3-202ENST00000359128 U2AF1L5P0DN76 240 aaPredicted RBP16.47■□□□□ 0.23
NLRC3-202ENST00000359128 U2AF1Q01081 240 aaKnown RBP eCLIP16.47■□□□□ 0.23
NLRC3-202ENST00000359128 STK31Q9BXU1 1019 aa16.45■□□□□ 0.22
NLRC3-202ENST00000359128 NUP155O75694 1391 aa16.45■□□□□ 0.22
NLRC3-202ENST00000359128 TDRD9Q8NDG6 1382 aaKnown RBP16.45■□□□□ 0.22
NLRC3-202ENST00000359128 TERF2IPQ9NYB0 399 aa16.45■□□□□ 0.22
NLRC3-202ENST00000359128 AMPHP49418 695 aa16.45■□□□□ 0.22
NLRC3-202ENST00000359128 GTF2E1P29083 439 aaPredicted RBP16.44■□□□□ 0.22
NLRC3-202ENST00000359128 GPATCH3Q96I76 525 aa16.44■□□□□ 0.22
NLRC3-202ENST00000359128 EVA1CP58658 441 aa16.44■□□□□ 0.22
NLRC3-202ENST00000359128 PPP4R2Q9NY27 417 aa16.44■□□□□ 0.22
NLRC3-202ENST00000359128 SETD5Q9C0A6 1442 aa16.44■□□□□ 0.22
NLRC3-202ENST00000359128 FOXD1Q16676 465 aa16.43■□□□□ 0.22
NLRC3-202ENST00000359128 HNRNPMP52272 730 aaKnown RBP eCLIP16.43■□□□□ 0.22
NLRC3-202ENST00000359128 FMN1Q68DA7 1419 aa16.42■□□□□ 0.22
NLRC3-202ENST00000359128 MSH5O43196 834 aa16.42■□□□□ 0.22
NLRC3-202ENST00000359128 LTV1Q96GA3 475 aaPredicted RBP16.42■□□□□ 0.22
NLRC3-202ENST00000359128 KIAA2012Q0VF49 1180 aa16.41■□□□□ 0.22
NLRC3-202ENST00000359128 ITPRIPQ8IWB1 547 aa16.41■□□□□ 0.22
NLRC3-202ENST00000359128 HSPA5P11021 654 aaKnown RBP16.4■□□□□ 0.22
NLRC3-202ENST00000359128 FRAT2O75474 233 aaPredicted RBP16.4■□□□□ 0.22
NLRC3-202ENST00000359128 DRC7Q8IY82 874 aa16.39■□□□□ 0.21
NLRC3-202ENST00000359128 HDAC5Q9UQL6 1122 aa16.39■□□□□ 0.21
NLRC3-202ENST00000359128 NUTM2FA1L443 756 aa16.39■□□□□ 0.21
NLRC3-202ENST00000359128 L1TD1Q5T7N2 865 aaKnown RBP16.39■□□□□ 0.21
NLRC3-202ENST00000359128 MYO15BQ96JP2 1530 aa16.38■□□□□ 0.21
NLRC3-202ENST00000359128 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.37■□□□□ 0.21
NLRC3-202ENST00000359128 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.37■□□□□ 0.21
NLRC3-202ENST00000359128 CHAF1AQ13111 956 aaPredicted RBP16.36■□□□□ 0.21
NLRC3-202ENST00000359128 CCDC88BA6NC98 1476 aa16.35■□□□□ 0.21
NLRC3-202ENST00000359128 HSP90B1P14625 803 aaKnown RBP16.35■□□□□ 0.21
NLRC3-202ENST00000359128 MPHOSPH9Q99550 1183 aa16.35■□□□□ 0.21
NLRC3-202ENST00000359128 CYB5RLQ6IPT4 315 aa16.35■□□□□ 0.21
NLRC3-202ENST00000359128 PRM3Q9NNZ6 103 aa16.35■□□□□ 0.21
NLRC3-202ENST00000359128 SPRYD3Q8NCJ5 442 aa16.34■□□□□ 0.21
NLRC3-202ENST00000359128 LMOD3Q0VAK6 560 aa16.34■□□□□ 0.21
NLRC3-202ENST00000359128 RSPH4AQ5TD94 716 aa16.34■□□□□ 0.21
NLRC3-202ENST00000359128 CCDC18Q5T9S5 1454 aa16.34■□□□□ 0.21
NLRC3-202ENST00000359128 B4GALNT3Q6L9W6 998 aa16.33■□□□□ 0.21
NLRC3-202ENST00000359128 TIMELESSQ9UNS1 1208 aa16.33■□□□□ 0.2
NLRC3-202ENST00000359128 SLC4A10Q6U841 1118 aa16.32■□□□□ 0.2
NLRC3-202ENST00000359128 C1orf141Q5JVX7 400 aa16.32■□□□□ 0.2
NLRC3-202ENST00000359128 HTATSF1O43719 755 aaKnown RBP16.32■□□□□ 0.2
NLRC3-202ENST00000359128 ABCC8Q09428 1581 aa16.32■□□□□ 0.2
NLRC3-202ENST00000359128 VPS53Q5VIR6 699 aa16.32■□□□□ 0.2
NLRC3-202ENST00000359128 RALBP1Q15311 655 aa16.31■□□□□ 0.2
NLRC3-202ENST00000359128 TRIM6-TRIM34B2RNG4 842 aa16.31■□□□□ 0.2
NLRC3-202ENST00000359128 HMMRO75330 724 aa16.3■□□□□ 0.2
NLRC3-202ENST00000359128 RWDD1Q9H446 243 aaPredicted RBP16.3■□□□□ 0.2
NLRC3-202ENST00000359128 PHF23Q9BUL5 403 aaPredicted RBP16.29■□□□□ 0.2
NLRC3-202ENST00000359128 JPH4Q96JJ6 628 aa16.29■□□□□ 0.2
NLRC3-202ENST00000359128 RASSF8Q8NHQ8 419 aa16.29■□□□□ 0.2
NLRC3-202ENST00000359128 TOMM22Q9NS69 142 aa16.29■□□□□ 0.2
NLRC3-202ENST00000359128 SMC4Q9NTJ3 1288 aa16.29■□□□□ 0.2
NLRC3-202ENST00000359128 OSCARQ8IYS5 282 aa16.28■□□□□ 0.2
NLRC3-202ENST00000359128 TRAK1Q9UPV9 953 aa16.27■□□□□ 0.2
NLRC3-202ENST00000359128 MARCH6O60337 910 aa16.27■□□□□ 0.19
NLRC3-202ENST00000359128 UACAQ9BZF9 1416 aa16.27■□□□□ 0.19
NLRC3-202ENST00000359128 NAP1L5Q96NT1 182 aaPredicted RBP16.26■□□□□ 0.19
NLRC3-202ENST00000359128 VPS8Q8N3P4 1428 aa16.26■□□□□ 0.19
NLRC3-202ENST00000359128 TRIM34Q9BYJ4 488 aa16.26■□□□□ 0.19
NLRC3-202ENST00000359128 NOC3LQ8WTT2 800 aaKnown RBP16.26■□□□□ 0.19
NLRC3-202ENST00000359128 TPM4P67936 248 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms