RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 KDM6BO15054 1643 aa21.68■■□□□ 1.06
GABPB1-202ENST00000359031 ARID3CA6NKF2 412 aa21.66■■□□□ 1.06
GABPB1-202ENST00000359031 TIMELESSQ9UNS1 1208 aa21.64■■□□□ 1.05
GABPB1-202ENST00000359031 KIF14Q15058 1648 aa21.63■■□□□ 1.05
GABPB1-202ENST00000359031 DAPK1P53355 1430 aa21.61■■□□□ 1.05
GABPB1-202ENST00000359031 ROCK1Q13464 1354 aa21.6■■□□□ 1.05
GABPB1-202ENST00000359031 TSPOAP1O95153 1857 aa21.59■■□□□ 1.05
GABPB1-202ENST00000359031 ADGBQ8N7X0 1667 aa21.58■■□□□ 1.04
GABPB1-202ENST00000359031 CROCC2H7BZ55 1655 aa21.57■■□□□ 1.04
GABPB1-202ENST00000359031 KDM4FA0A1W2PPD8 638 aa21.57■■□□□ 1.04
GABPB1-202ENST00000359031 ACIN1Q9UKV3 1341 aaKnown RBP21.56■■□□□ 1.04
GABPB1-202ENST00000359031 CAMSAP2Q08AD1 1489 aa21.56■■□□□ 1.04
GABPB1-202ENST00000359031 GPATCH8Q9UKJ3 1502 aaKnown RBP21.56■■□□□ 1.04
GABPB1-202ENST00000359031 ABCC5O15440 1437 aa21.55■■□□□ 1.04
GABPB1-202ENST00000359031 ATP10BO94823 1461 aa21.55■■□□□ 1.04
GABPB1-202ENST00000359031 CDC42BPAQ5VT25 1732 aa21.54■■□□□ 1.04
GABPB1-202ENST00000359031 PTPRGP23470 1445 aa21.52■■□□□ 1.04
GABPB1-202ENST00000359031 SIN3AQ96ST3 1273 aa21.52■■□□□ 1.04
GABPB1-202ENST00000359031 RRP7BPQ9NSQ0 103 aa21.51■■□□□ 1.03
GABPB1-202ENST00000359031 CHIC2Q9UKJ5 165 aa21.49■■□□□ 1.03
GABPB1-202ENST00000359031 NEUROD1Q13562 356 aa21.48■■□□□ 1.03
GABPB1-202ENST00000359031 ADGRL2O95490 1459 aa21.47■■□□□ 1.03
GABPB1-202ENST00000359031 PLEKHD1A6NEE1 506 aa21.46■■□□□ 1.03
GABPB1-202ENST00000359031 CFDP1Q9UEE9 299 aaPredicted RBP21.46■■□□□ 1.03
GABPB1-202ENST00000359031 TONSLQ96HA7 1378 aa21.46■■□□□ 1.03
GABPB1-202ENST00000359031 DENND4BO75064 1496 aaPredicted RBP21.44■■□□□ 1.02
GABPB1-202ENST00000359031 ABCC2Q92887 1545 aa21.44■■□□□ 1.02
GABPB1-202ENST00000359031 ZNF644Q9H582 1327 aaPredicted RBP21.43■■□□□ 1.02
GABPB1-202ENST00000359031 SHANK2Q9UPX8 1470 aa21.43■■□□□ 1.02
GABPB1-202ENST00000359031 ASXL2Q76L83 1435 aa21.42■■□□□ 1.02
GABPB1-202ENST00000359031 MIER1Q8N108 512 aa21.41■■□□□ 1.02
GABPB1-202ENST00000359031 PREX2Q70Z35 1606 aa21.41■■□□□ 1.02
GABPB1-202ENST00000359031 PPP1R15AO75807 674 aaPredicted RBP21.4■■□□□ 1.02
GABPB1-202ENST00000359031 CENPBP07199 599 aaPredicted RBP21.4■■□□□ 1.02
GABPB1-202ENST00000359031 ARHGEF5Q12774 1597 aa21.39■■□□□ 1.01
GABPB1-202ENST00000359031 ILDR1Q86SU0 546 aaPredicted RBP21.37■■□□□ 1.01
GABPB1-202ENST00000359031 KDM5BQ9UGL1 1544 aa21.37■■□□□ 1.01
GABPB1-202ENST00000359031 TRIM52Q96A61 297 aa21.37■■□□□ 1.01
GABPB1-202ENST00000359031 ADGRL1O94910 1474 aa21.36■■□□□ 1.01
GABPB1-202ENST00000359031 NCOA1Q15788 1441 aa21.36■■□□□ 1.01
GABPB1-202ENST00000359031 GLI2P10070 1586 aa21.36■■□□□ 1.01
GABPB1-202ENST00000359031 CDC42BPBQ9Y5S2 1711 aa21.35■■□□□ 1.01
GABPB1-202ENST00000359031 MPHOSPH9Q99550 1183 aa21.33■■□□□ 1.01
GABPB1-202ENST00000359031 PPRC1Q5VV67 1664 aaKnown RBP21.33■■□□□ 1.01
GABPB1-202ENST00000359031 ANKRD30AQ9BXX3 1397 aa21.33■■□□□ 1.01
GABPB1-202ENST00000359031 UHRF1BP1LA0JNW5 1464 aa21.32■■□□□ 1
GABPB1-202ENST00000359031 SAMD9LQ8IVG5 1584 aa21.31■■□□□ 1
GABPB1-202ENST00000359031 ZNF777Q9ULD5 760 aaPredicted RBP21.3■■□□□ 1
GABPB1-202ENST00000359031 MYO5CQ9NQX4 1742 aa21.3■■□□□ 1
GABPB1-202ENST00000359031 C9orf84Q5VXU9 1444 aa21.29■■□□□ 1
GABPB1-202ENST00000359031 TTC37Q6PGP7 1564 aa21.29■■□□□ 1
GABPB1-202ENST00000359031 ZCCHC11Q5TAX3 1644 aaKnown RBP21.28■■□□□ 1
GABPB1-202ENST00000359031 PZPP20742 1482 aa21.28■■□□□ 1
GABPB1-202ENST00000359031 TEX14Q8IWB6 1497 aa21.28■■□□□ 1
GABPB1-202ENST00000359031 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.27■■□□□ 12e-9■■■■■ 40.7
GABPB1-202ENST00000359031 RPRD2Q5VT52 1461 aaKnown RBP21.26■□□□□ 0.99
GABPB1-202ENST00000359031 CCDC141Q6ZP82 1450 aa21.26■□□□□ 0.99
GABPB1-202ENST00000359031 ANKRD30BQ9BXX2 1392 aa21.25■□□□□ 0.99
GABPB1-202ENST00000359031 MBD5Q9P267 1494 aa21.24■□□□□ 0.99
GABPB1-202ENST00000359031 KDM5DQ9BY66 1539 aa21.24■□□□□ 0.99
GABPB1-202ENST00000359031 MAST1Q9Y2H9 1570 aa21.24■□□□□ 0.99
GABPB1-202ENST00000359031 MAP3K4Q9Y6R4 1608 aa21.24■□□□□ 0.99
GABPB1-202ENST00000359031 ANKRD50Q9ULJ7 1429 aa21.24■□□□□ 0.99
GABPB1-202ENST00000359031 COL17A1Q9UMD9 1497 aaPredicted RBP21.24■□□□□ 0.99
GABPB1-202ENST00000359031 ARHGAP5Q13017 1502 aa21.21■□□□□ 0.99
GABPB1-202ENST00000359031 PLEKHH2Q8IVE3 1493 aa21.2■□□□□ 0.98
GABPB1-202ENST00000359031 SCAF1Q9H7N4 1312 aaKnown RBP21.2■□□□□ 0.98
GABPB1-202ENST00000359031 HECW2Q9P2P5 1572 aa21.2■□□□□ 0.98
GABPB1-202ENST00000359031 RSPH4AQ5TD94 716 aa21.18■□□□□ 0.98
GABPB1-202ENST00000359031 SLC4A1APQ9BWU0 796 aaKnown RBP21.18■□□□□ 0.98
GABPB1-202ENST00000359031 SYCP2Q9BX26 1530 aa21.18■□□□□ 0.98
GABPB1-202ENST00000359031 KIAA1107Q9UPP5 1409 aa21.17■□□□□ 0.98
GABPB1-202ENST00000359031 TSPY4P0CV99 314 aa21.17■□□□□ 0.98
GABPB1-202ENST00000359031 TSPY10P0CW01 314 aa21.17■□□□□ 0.98
GABPB1-202ENST00000359031 PLXNC1O60486 1568 aa21.16■□□□□ 0.98
GABPB1-202ENST00000359031 KIF15Q9NS87 1388 aa21.15■□□□□ 0.98
GABPB1-202ENST00000359031 WDR7Q9Y4E6 1490 aa21.15■□□□□ 0.98
GABPB1-202ENST00000359031 YTHDC1Q96MU7 727 aaKnown RBP21.13■□□□□ 0.97
GABPB1-202ENST00000359031 FOXD1Q16676 465 aa21.12■□□□□ 0.97
GABPB1-202ENST00000359031 ARAP3Q8WWN8 1544 aa21.11■□□□□ 0.97
GABPB1-202ENST00000359031 HNRNPMP52272 730 aaKnown RBP eCLIP21.11■□□□□ 0.97
GABPB1-202ENST00000359031 UNC13BO14795 1591 aa21.09■□□□□ 0.97
GABPB1-202ENST00000359031 PLCH2O75038 1416 aa21.09■□□□□ 0.97
GABPB1-202ENST00000359031 ABCC1P33527 1531 aa21.08■□□□□ 0.97
GABPB1-202ENST00000359031 L3MBTL2Q969R5 705 aa21.08■□□□□ 0.97
GABPB1-202ENST00000359031 CD109Q6YHK3 1445 aa21.07■□□□□ 0.96
GABPB1-202ENST00000359031 KCNH8Q96L42 1107 aa21.07■□□□□ 0.96
GABPB1-202ENST00000359031 NUP155O75694 1391 aa21.06■□□□□ 0.96
GABPB1-202ENST00000359031 DDX10Q13206 875 aaKnown RBP21.05■□□□□ 0.96
GABPB1-202ENST00000359031 PKD2Q13563 968 aa21.03■□□□□ 0.96
GABPB1-202ENST00000359031 FAM135AQ9P2D6 1515 aa21.02■□□□□ 0.96
GABPB1-202ENST00000359031 DUOX2Q9NRD8 1548 aa21.02■□□□□ 0.96
GABPB1-202ENST00000359031 POLR1AO95602 1720 aaPredicted RBP21.02■□□□□ 0.95
GABPB1-202ENST00000359031 HIRIP3Q9BW71 556 aaPredicted RBP21.01■□□□□ 0.95
GABPB1-202ENST00000359031 ARHGEF12Q9NZN5 1544 aa21.01■□□□□ 0.95
GABPB1-202ENST00000359031 IQGAP3Q86VI3 1631 aa21■□□□□ 0.95
GABPB1-202ENST00000359031 ABCA9Q8IUA7 1624 aa20.99■□□□□ 0.95
GABPB1-202ENST00000359031 EIF4G2P78344 907 aaKnown RBP eCLIP20.99■□□□□ 0.95
GABPB1-202ENST00000359031 EFCAB2Q5VUJ9 269 aa20.98■□□□□ 0.95
GABPB1-202ENST00000359031 ERBINQ96RT1 1412 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms