RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 ZNF330Q9Y3S2 320 aaPredicted RBP14.15□□□□□ -0.14
COL11A1-202ENST00000358392 PATL2C9JE40 543 aaKnown RBP14.15□□□□□ -0.14
COL11A1-202ENST00000358392 ZCCHC6Q5VYS8 1495 aaKnown RBP14.14□□□□□ -0.15
COL11A1-202ENST00000358392 FOXD4L5Q5VV16 416 aaPredicted RBP14.14□□□□□ -0.15
COL11A1-202ENST00000358392 FOXD4L4Q8WXT5 416 aaPredicted RBP14.14□□□□□ -0.15
COL11A1-202ENST00000358392 CLIP1P30622 1438 aa14.14□□□□□ -0.15
COL11A1-202ENST00000358392 MFAP1P55081 439 aaKnown RBP14.13□□□□□ -0.15
COL11A1-202ENST00000358392 GOLGA6L3A6NEY3 463 aa14.12□□□□□ -0.15
COL11A1-202ENST00000358392 ITPRIPQ8IWB1 547 aa14.11□□□□□ -0.15
COL11A1-202ENST00000358392 TPM4P67936 248 aa14.11□□□□□ -0.15
COL11A1-202ENST00000358392 SRPK2P78362 688 aaKnown RBP14.09□□□□□ -0.15
COL11A1-202ENST00000358392 RTF1Q92541 710 aaKnown RBP14.09□□□□□ -0.15
COL11A1-202ENST00000358392 PLEKHD1A6NEE1 506 aa14.08□□□□□ -0.16
COL11A1-202ENST00000358392 TRIM6-TRIM34B2RNG4 842 aa14.08□□□□□ -0.16
COL11A1-202ENST00000358392 MORC1Q86VD1 984 aa14.08□□□□□ -0.16
COL11A1-202ENST00000358392 RASSF8Q8NHQ8 419 aa14.08□□□□□ -0.16
COL11A1-202ENST00000358392 CHMP3Q9Y3E7 222 aa14.07□□□□□ -0.16
COL11A1-202ENST00000358392 SYAP1Q96A49 352 aaPredicted RBP14.07□□□□□ -0.16
COL11A1-202ENST00000358392 WWC1Q8IX03 1113 aa14.07□□□□□ -0.16
COL11A1-202ENST00000358392 CFDP1Q9UEE9 299 aaPredicted RBP14.07□□□□□ -0.16
COL11A1-202ENST00000358392 DCAF11Q8TEB1 546 aa14.06□□□□□ -0.16
COL11A1-202ENST00000358392 PTMSP20962 102 aa14.06□□□□□ -0.16
COL11A1-202ENST00000358392 TMF1P82094 1093 aa14.05□□□□□ -0.16
COL11A1-202ENST00000358392 PES1O00541 588 aaKnown RBP14.05□□□□□ -0.16
COL11A1-202ENST00000358392 CCAR2Q8N163 923 aaKnown RBP14.05□□□□□ -0.16
COL11A1-202ENST00000358392 HSP90AA2PQ14568 343 aaPredicted RBP14.04□□□□□ -0.16
COL11A1-202ENST00000358392 RSF1Q96T23 1441 aaPredicted RBP14.04□□□□□ -0.16
COL11A1-202ENST00000358392 FOXD4L6Q3SYB3 417 aaPredicted RBP14.04□□□□□ -0.16
COL11A1-202ENST00000358392 FOXD4L3Q6VB84 417 aaPredicted RBP14.04□□□□□ -0.16
COL11A1-202ENST00000358392 HTATSF1O43719 755 aaKnown RBP14.03□□□□□ -0.16
COL11A1-202ENST00000358392 STK26Q9P289 416 aa14.03□□□□□ -0.16
COL11A1-202ENST00000358392 SETQ01105 290 aaPredicted RBP14.03□□□□□ -0.16
COL11A1-202ENST00000358392 CALD1Q05682 793 aaKnown RBP14.03□□□□□ -0.16
COL11A1-202ENST00000358392 VPS53Q5VIR6 699 aa14.03□□□□□ -0.16
COL11A1-202ENST00000358392 GORABQ5T7V8 394 aa14.02□□□□□ -0.17
COL11A1-202ENST00000358392 PAK3O75914 559 aaPredicted RBP14.02□□□□□ -0.17
COL11A1-202ENST00000358392 MYO15BQ96JP2 1530 aa14.02□□□□□ -0.17
COL11A1-202ENST00000358392 MLECQ14165 292 aa14.01□□□□□ -0.17
COL11A1-202ENST00000358392 VSIG10Q8N0Z9 540 aa14.01□□□□□ -0.17
COL11A1-202ENST00000358392 CCDC180Q9P1Z9 1646 aa14.01□□□□□ -0.17
COL11A1-202ENST00000358392 CFAP44Q96MT7 982 aa14□□□□□ -0.17
COL11A1-202ENST00000358392 CCDC9Q9Y3X0 531 aaKnown RBP14□□□□□ -0.17
COL11A1-202ENST00000358392 RCAN3Q9UKA8 241 aa14□□□□□ -0.17
COL11A1-202ENST00000358392 TPM3P06753 285 aa13.99□□□□□ -0.17
COL11A1-202ENST00000358392 CEP89Q96ST8 783 aa13.99□□□□□ -0.17
COL11A1-202ENST00000358392 CEP162Q5TB80 1403 aa13.99□□□□□ -0.17
COL11A1-202ENST00000358392 RWDD1Q9H446 243 aaPredicted RBP13.98□□□□□ -0.17
COL11A1-202ENST00000358392 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.98□□□□□ -0.17
COL11A1-202ENST00000358392 ZNF771Q7L3S4 317 aaPredicted RBP13.98□□□□□ -0.17
COL11A1-202ENST00000358392 IPO8O15397 1037 aaKnown RBP13.98□□□□□ -0.17
COL11A1-202ENST00000358392 TAF7LQ5H9L4 462 aa13.97□□□□□ -0.17
COL11A1-202ENST00000358392 SLC4A10Q6U841 1118 aa13.97□□□□□ -0.17
COL11A1-202ENST00000358392 BCL11BQ9C0K0 894 aaPredicted RBP13.97□□□□□ -0.17
COL11A1-202ENST00000358392 ZNF592Q92610 1267 aa13.97□□□□□ -0.17
COL11A1-202ENST00000358392 TOMM22Q9NS69 142 aa13.97□□□□□ -0.17
COL11A1-202ENST00000358392 SLC4A3P48751 1232 aa13.96□□□□□ -0.17
COL11A1-202ENST00000358392 TPD52L1Q16890 204 aaPredicted RBP13.96□□□□□ -0.18
COL11A1-202ENST00000358392 CLUAP1Q96AJ1 413 aa13.96□□□□□ -0.18
COL11A1-202ENST00000358392 IPO9Q96P70 1041 aaKnown RBP13.96□□□□□ -0.18
COL11A1-202ENST00000358392 TIMELESSQ9UNS1 1208 aa13.96□□□□□ -0.18
COL11A1-202ENST00000358392 U2AF1L5P0DN76 240 aaPredicted RBP13.95□□□□□ -0.18
COL11A1-202ENST00000358392 U2AF1Q01081 240 aaKnown RBP eCLIP13.95□□□□□ -0.18
COL11A1-202ENST00000358392 CCDC146Q8IYE0 955 aa13.95□□□□□ -0.18
COL11A1-202ENST00000358392 CSB-PGBD3P0DP91 1061 aa13.95□□□□□ -0.18
COL11A1-202ENST00000358392 GPATCH3Q96I76 525 aa13.94□□□□□ -0.18
COL11A1-202ENST00000358392 MARCH6O60337 910 aa13.94□□□□□ -0.18
COL11A1-202ENST00000358392 HSPA5P11021 654 aaKnown RBP13.94□□□□□ -0.18
COL11A1-202ENST00000358392 CSPP1Q1MSJ5 1256 aa13.94□□□□□ -0.18
COL11A1-202ENST00000358392 SF3A1Q15459 793 aaKnown RBP13.94□□□□□ -0.18
COL11A1-202ENST00000358392 FOXD1Q16676 465 aa13.94□□□□□ -0.18
COL11A1-202ENST00000358392 SMC4Q9NTJ3 1288 aa13.93□□□□□ -0.18
COL11A1-202ENST00000358392 TSHZ2Q9NRE2 1034 aa13.93□□□□□ -0.18
COL11A1-202ENST00000358392 TCERG1O14776 1098 aaKnown RBP13.93□□□□□ -0.18
COL11A1-202ENST00000358392 CALRP27797 417 aaKnown RBP13.93□□□□□ -0.18
COL11A1-202ENST00000358392 KTN1Q86UP2 1357 aaKnown RBP13.93□□□□□ -0.18
COL11A1-202ENST00000358392 GOLGA3Q08378 1498 aa13.92□□□□□ -0.18
COL11A1-202ENST00000358392 PMFBP1Q8TBY8 1022 aa13.92□□□□□ -0.18
COL11A1-202ENST00000358392 G3V3G9 751 aa13.92□□□□□ -0.18
COL11A1-202ENST00000358392 DCAF8Q5TAQ9 597 aa13.92□□□□□ -0.18
COL11A1-202ENST00000358392 PHF14O94880 888 aa13.91□□□□□ -0.18
COL11A1-202ENST00000358392 KIF16BQ96L93 1317 aa13.91□□□□□ -0.18
COL11A1-202ENST00000358392 CCDC34Q96HJ3 373 aa13.91□□□□□ -0.18
COL11A1-202ENST00000358392 H3BQV1 296 aa13.9□□□□□ -0.18
COL11A1-202ENST00000358392 IFFO2Q5TF58 517 aa13.9□□□□□ -0.18
COL11A1-202ENST00000358392 TMX4Q9H1E5 349 aaPredicted RBP13.9□□□□□ -0.18
COL11A1-202ENST00000358392 USP35Q9P2H5 1018 aa13.88□□□□□ -0.19
COL11A1-202ENST00000358392 HDGFL2Q7Z4V5 671 aaPredicted RBP13.88□□□□□ -0.19
COL11A1-202ENST00000358392 RILPL2Q969X0 211 aa13.88□□□□□ -0.19
COL11A1-202ENST00000358392 GOLGA6L19H0YKK7 550 aa13.88□□□□□ -0.19
COL11A1-202ENST00000358392 FBXW7Q969H0 707 aa13.88□□□□□ -0.19
COL11A1-202ENST00000358392 TSR1Q2NL82 804 aaKnown RBP13.87□□□□□ -0.19
COL11A1-202ENST00000358392 FRAT2O75474 233 aaPredicted RBP13.87□□□□□ -0.19
COL11A1-202ENST00000358392 STK31Q9BXU1 1019 aa13.87□□□□□ -0.19
COL11A1-202ENST00000358392 ST18O60284 1047 aa13.86□□□□□ -0.19
COL11A1-202ENST00000358392 PCMTD1Q96MG8 357 aaPredicted RBP13.86□□□□□ -0.19
COL11A1-202ENST00000358392 RSPH6AQ9H0K4 717 aa13.86□□□□□ -0.19
COL11A1-202ENST00000358392 CCER2I3L3R5 266 aa13.85□□□□□ -0.19
COL11A1-202ENST00000358392 DDX49Q9Y6V7 483 aaKnown RBP13.85□□□□□ -0.19
COL11A1-202ENST00000358392 MCTP1Q6DN14 999 aa13.85□□□□□ -0.19
COL11A1-202ENST00000358392 FAM13BQ9NYF5 915 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms