RNA–Protein interactions for RNA: ENST00000357570.9

CACNA1E-201, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1E, Length 7,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-201ENST00000357570 ACIN1Q9UKV3 1341 aaKnown RBP13.7□□□□□ -0.22
CACNA1E-201ENST00000357570 ANO8Q9HCE9 1232 aaPredicted RBP13.69□□□□□ -0.22
CACNA1E-201ENST00000357570 KRI1Q8N9T8 703 aaKnown RBP13.69□□□□□ -0.22
CACNA1E-201ENST00000357570 KIF3BO15066 747 aa13.68□□□□□ -0.22
CACNA1E-201ENST00000357570 SYTL4Q96C24 671 aaPredicted RBP13.68□□□□□ -0.22
CACNA1E-201ENST00000357570 TRIM44Q96DX7 344 aaPredicted RBP13.68□□□□□ -0.22
CACNA1E-201ENST00000357570 DNTTIP2Q5QJE6 756 aaKnown RBP13.67□□□□□ -0.22
CACNA1E-201ENST00000357570 WRNQ14191 1432 aaPredicted RBP eCLIP13.67□□□□□ -0.22
CACNA1E-201ENST00000357570 PDE4CQ08493 712 aa13.67□□□□□ -0.22
CACNA1E-201ENST00000357570 VPS53Q5VIR6 699 aa13.67□□□□□ -0.22
CACNA1E-201ENST00000357570 SIN3AQ96ST3 1273 aa13.66□□□□□ -0.22
CACNA1E-201ENST00000357570 WASHC2CQ9Y4E1 1318 aa13.66□□□□□ -0.22
CACNA1E-201ENST00000357570 AMPHP49418 695 aa13.65□□□□□ -0.22
CACNA1E-201ENST00000357570 HSP90AB1P08238 724 aaKnown RBP13.65□□□□□ -0.22
CACNA1E-201ENST00000357570 GOLGA3Q08378 1498 aa13.65□□□□□ -0.22
CACNA1E-201ENST00000357570 GOLGA6L4A6NEF3 574 aa13.64□□□□□ -0.23
CACNA1E-201ENST00000357570 CARMIL2Q6F5E8 1435 aa13.64□□□□□ -0.23
CACNA1E-201ENST00000357570 FOXD1Q16676 465 aa13.64□□□□□ -0.23
CACNA1E-201ENST00000357570 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.63□□□□□ -0.23
CACNA1E-201ENST00000357570 CHMP4BQ9H444 224 aaKnown RBP13.63□□□□□ -0.23
CACNA1E-201ENST00000357570 FBXW7Q969H0 707 aa13.63□□□□□ -0.23
CACNA1E-201ENST00000357570 EFCAB2Q5VUJ9 269 aa13.63□□□□□ -0.23
CACNA1E-201ENST00000357570 CUX2O14529 1486 aa13.62□□□□□ -0.23
CACNA1E-201ENST00000357570 PPP1R1BQ9UD71 204 aaPredicted RBP13.62□□□□□ -0.23
CACNA1E-201ENST00000357570 RAD21O60216 631 aa13.62□□□□□ -0.23
CACNA1E-201ENST00000357570 DDRGK1Q96HY6 314 aa13.6□□□□□ -0.23
CACNA1E-201ENST00000357570 U2AF1L5P0DN76 240 aaPredicted RBP13.6□□□□□ -0.23
CACNA1E-201ENST00000357570 U2AF1Q01081 240 aaKnown RBP eCLIP13.6□□□□□ -0.23
CACNA1E-201ENST00000357570 CECR2Q9BXF3 1484 aa13.6□□□□□ -0.23
CACNA1E-201ENST00000357570 HNRNPMP52272 730 aaKnown RBP eCLIP13.59□□□□□ -0.23
CACNA1E-201ENST00000357570 MIER1Q8N108 512 aa13.59□□□□□ -0.23
CACNA1E-201ENST00000357570 CWC22Q9HCG8 908 aaKnown RBP13.59□□□□□ -0.23
CACNA1E-201ENST00000357570 NGEFQ8N5V2 710 aa13.59□□□□□ -0.23
CACNA1E-201ENST00000357570 SPAG9O60271 1321 aaKnown RBP13.59□□□□□ -0.23
CACNA1E-201ENST00000357570 TOMM22Q9NS69 142 aa13.58□□□□□ -0.23
CACNA1E-201ENST00000357570 CCDC180Q9P1Z9 1646 aa13.58□□□□□ -0.24
CACNA1E-201ENST00000357570 MS4A1P11836 297 aa13.58□□□□□ -0.24
CACNA1E-201ENST00000357570 GOLGA6L6A8MZA4 724 aa13.58□□□□□ -0.24
CACNA1E-201ENST00000357570 PKD2Q13563 968 aa13.58□□□□□ -0.24
CACNA1E-201ENST00000357570 KIAA1211Q6ZU35 1233 aa13.58□□□□□ -0.24
CACNA1E-201ENST00000357570 CARMIL1Q5VZK9 1371 aa13.58□□□□□ -0.24
CACNA1E-201ENST00000357570 SPRYD3Q8NCJ5 442 aa13.57□□□□□ -0.24
CACNA1E-201ENST00000357570 MCCP23508 829 aa13.57□□□□□ -0.24
CACNA1E-201ENST00000357570 SLC4A10Q6U841 1118 aa13.57□□□□□ -0.24
CACNA1E-201ENST00000357570 CEP162Q5TB80 1403 aa13.56□□□□□ -0.24
CACNA1E-201ENST00000357570 TDRD9Q8NDG6 1382 aaKnown RBP13.56□□□□□ -0.24
CACNA1E-201ENST00000357570 SUPT16HQ9Y5B9 1047 aaKnown RBP13.56□□□□□ -0.24
CACNA1E-201ENST00000357570 NACADO15069 1562 aa13.55□□□□□ -0.24
CACNA1E-201ENST00000357570 PDS5BQ9NTI5 1447 aa13.55□□□□□ -0.24
CACNA1E-201ENST00000357570 ERICH6BQ5W0A0 696 aa13.55□□□□□ -0.24
CACNA1E-201ENST00000357570 WWC1Q8IX03 1113 aa13.55□□□□□ -0.24
CACNA1E-201ENST00000357570 STK31Q9BXU1 1019 aa13.55□□□□□ -0.24
CACNA1E-201ENST00000357570 TRIM34Q9BYJ4 488 aa13.54□□□□□ -0.24
CACNA1E-201ENST00000357570 CTDP1Q9Y5B0 961 aaPredicted RBP13.54□□□□□ -0.24
CACNA1E-201ENST00000357570 OSCARQ8IYS5 282 aa13.54□□□□□ -0.24
CACNA1E-201ENST00000357570 CNKSR2Q8WXI2 1034 aa13.54□□□□□ -0.24
CACNA1E-201ENST00000357570 MARCH6O60337 910 aa13.53□□□□□ -0.24
CACNA1E-201ENST00000357570 SAMD1Q6SPF0 538 aaPredicted RBP13.53□□□□□ -0.24
CACNA1E-201ENST00000357570 B4GALNT3Q6L9W6 998 aa13.53□□□□□ -0.24
CACNA1E-201ENST00000357570 FAM69CQ0P6D2 419 aa13.52□□□□□ -0.24
CACNA1E-201ENST00000357570 RASSF8Q8NHQ8 419 aa13.52□□□□□ -0.24
CACNA1E-201ENST00000357570 HSP90B1P14625 803 aaKnown RBP13.51□□□□□ -0.25
CACNA1E-201ENST00000357570 DRC7Q8IY82 874 aa13.51□□□□□ -0.25
CACNA1E-201ENST00000357570 CREBRFQ8IUR6 639 aa13.51□□□□□ -0.25
CACNA1E-201ENST00000357570 SF3B2Q13435 895 aaKnown RBP13.51□□□□□ -0.25
CACNA1E-201ENST00000357570 C1orf141Q5JVX7 400 aa13.51□□□□□ -0.25
CACNA1E-201ENST00000357570 SOGA1O94964 1423 aa13.5□□□□□ -0.25
CACNA1E-201ENST00000357570 PSME1Q06323 249 aa13.5□□□□□ -0.25
CACNA1E-201ENST00000357570 ROCK2O75116 1388 aaKnown RBP13.5□□□□□ -0.25
CACNA1E-201ENST00000357570 KIAA2012Q0VF49 1180 aa13.5□□□□□ -0.25
CACNA1E-201ENST00000357570 TRAK1Q9UPV9 953 aa13.5□□□□□ -0.25
CACNA1E-201ENST00000357570 ITPRIPQ8IWB1 547 aa13.5□□□□□ -0.25
CACNA1E-201ENST00000357570 EEA1Q15075 1411 aa13.49□□□□□ -0.25
CACNA1E-201ENST00000357570 TERF2IPQ9NYB0 399 aa13.49□□□□□ -0.25
CACNA1E-201ENST00000357570 TRIM6-TRIM34B2RNG4 842 aa13.49□□□□□ -0.25
CACNA1E-201ENST00000357570 ATF3P18847 181 aa13.49□□□□□ -0.25
CACNA1E-201ENST00000357570 NUP155O75694 1391 aa13.48□□□□□ -0.25
CACNA1E-201ENST00000357570 NRDCO43847 1150 aa13.48□□□□□ -0.25
CACNA1E-201ENST00000357570 PIP4K2BP78356 416 aa13.48□□□□□ -0.25
CACNA1E-201ENST00000357570 GPATCH3Q96I76 525 aa13.47□□□□□ -0.25
CACNA1E-201ENST00000357570 CALD1Q05682 793 aaKnown RBP13.47□□□□□ -0.25
CACNA1E-201ENST00000357570 TCEAL9Q9UHQ7 104 aa13.47□□□□□ -0.25
CACNA1E-201ENST00000357570 FHAD1B1AJZ9 1412 aa13.47□□□□□ -0.25
CACNA1E-201ENST00000357570 CEP164Q9UPV0 1460 aa13.47□□□□□ -0.25
CACNA1E-201ENST00000357570 NUTM2BA6NNL0 878 aaPredicted RBP13.47□□□□□ -0.25
CACNA1E-201ENST00000357570 NUTM2EB1AL46 878 aaPredicted RBP13.47□□□□□ -0.25
CACNA1E-201ENST00000357570 NUTM2AQ8IVF1 878 aaPredicted RBP13.47□□□□□ -0.25
CACNA1E-201ENST00000357570 ANP32EQ9BTT0 268 aa13.46□□□□□ -0.25
CACNA1E-201ENST00000357570 IPO8O15397 1037 aaKnown RBP13.46□□□□□ -0.26
CACNA1E-201ENST00000357570 NOC3LQ8WTT2 800 aaKnown RBP13.45□□□□□ -0.26
CACNA1E-201ENST00000357570 USP35Q9P2H5 1018 aa13.45□□□□□ -0.26
CACNA1E-201ENST00000357570 DCAF1Q9Y4B6 1507 aa13.45□□□□□ -0.26
CACNA1E-201ENST00000357570 HSCBQ8IWL3 235 aa13.45□□□□□ -0.26
CACNA1E-201ENST00000357570 NOL10Q9BSC4 688 aaKnown RBP13.44□□□□□ -0.26
CACNA1E-201ENST00000357570 TTC5Q8N0Z6 440 aa13.44□□□□□ -0.26
CACNA1E-201ENST00000357570 CHAF1AQ13111 956 aaPredicted RBP13.43□□□□□ -0.26
CACNA1E-201ENST00000357570 VPS37DQ86XT2 251 aa13.43□□□□□ -0.26
CACNA1E-201ENST00000357570 FBXO3Q9UK99 471 aa13.43□□□□□ -0.26
CACNA1E-201ENST00000357570 GLIPR1L2Q4G1C9 344 aa13.42□□□□□ -0.26
CACNA1E-201ENST00000357570 CCDC146Q8IYE0 955 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms