RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 TTC37Q6PGP7 1564 aa18.6■□□□□ 0.57
RTFDC1-202ENST00000357348 GPATCH8Q9UKJ3 1502 aaKnown RBP18.6■□□□□ 0.57
RTFDC1-202ENST00000357348 ABCC10Q5T3U5 1492 aa18.59■□□□□ 0.57
RTFDC1-202ENST00000357348 WDR7Q9Y4E6 1490 aa18.59■□□□□ 0.57
RTFDC1-202ENST00000357348 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.59■□□□□ 0.57
RTFDC1-202ENST00000357348 ITSN2Q9NZM3 1697 aa18.57■□□□□ 0.56
RTFDC1-202ENST00000357348 MIA2Q96PC5 1412 aa18.54■□□□□ 0.56
RTFDC1-202ENST00000357348 CDC42BPBQ9Y5S2 1711 aa18.54■□□□□ 0.56
RTFDC1-202ENST00000357348 CHIC2Q9UKJ5 165 aa18.52■□□□□ 0.56
RTFDC1-202ENST00000357348 MYO5CQ9NQX4 1742 aa18.52■□□□□ 0.55
RTFDC1-202ENST00000357348 MIER1Q8N108 512 aa18.51■□□□□ 0.55
RTFDC1-202ENST00000357348 CAMSAP2Q08AD1 1489 aa18.5■□□□□ 0.55
RTFDC1-202ENST00000357348 ARHGAP5Q13017 1502 aa18.5■□□□□ 0.55
RTFDC1-202ENST00000357348 PREX2Q70Z35 1606 aa18.5■□□□□ 0.55
RTFDC1-202ENST00000357348 TCOF1Q13428 1488 aaKnown RBP18.49■□□□□ 0.55
RTFDC1-202ENST00000357348 PTPRKQ15262 1439 aa18.49■□□□□ 0.55
RTFDC1-202ENST00000357348 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.47■□□□□ 0.55
RTFDC1-202ENST00000357348 HNRNPMP52272 730 aaKnown RBP eCLIP18.47■□□□□ 0.55
RTFDC1-202ENST00000357348 CLSPNQ9HAW4 1339 aa18.45■□□□□ 0.54
RTFDC1-202ENST00000357348 MAPKBP1O60336 1514 aa18.44■□□□□ 0.54
RTFDC1-202ENST00000357348 SAMD9LQ8IVG5 1584 aa18.44■□□□□ 0.54
RTFDC1-202ENST00000357348 ABCA9Q8IUA7 1624 aa18.44■□□□□ 0.54
RTFDC1-202ENST00000357348 PLCH2O75038 1416 aa18.44■□□□□ 0.54
RTFDC1-202ENST00000357348 RRP7BPQ9NSQ0 103 aa18.43■□□□□ 0.54
RTFDC1-202ENST00000357348 DNAJC5Q9H3Z4 198 aa18.42■□□□□ 0.54
RTFDC1-202ENST00000357348 DAPK1P53355 1430 aa18.42■□□□□ 0.54
RTFDC1-202ENST00000357348 ABCC5O15440 1437 aa18.41■□□□□ 0.54
RTFDC1-202ENST00000357348 EFCAB2Q5VUJ9 269 aa18.41■□□□□ 0.54
RTFDC1-202ENST00000357348 DNMT1P26358 1616 aaKnown RBP18.4■□□□□ 0.54
RTFDC1-202ENST00000357348 FAM69CQ0P6D2 419 aa18.4■□□□□ 0.54
RTFDC1-202ENST00000357348 YTHDC1Q96MU7 727 aaKnown RBP18.39■□□□□ 0.54
RTFDC1-202ENST00000357348 CD109Q6YHK3 1445 aa18.39■□□□□ 0.53
RTFDC1-202ENST00000357348 SYCP2Q9BX26 1530 aa18.39■□□□□ 0.53
RTFDC1-202ENST00000357348 FANCAO15360 1455 aa18.37■□□□□ 0.53
RTFDC1-202ENST00000357348 TSPOAP1O95153 1857 aa18.36■□□□□ 0.53
RTFDC1-202ENST00000357348 RAB3GAP2Q9H2M9 1393 aa18.36■□□□□ 0.53
RTFDC1-202ENST00000357348 ARHGEF12Q9NZN5 1544 aa18.35■□□□□ 0.53
RTFDC1-202ENST00000357348 SETD5Q9C0A6 1442 aa18.34■□□□□ 0.53
RTFDC1-202ENST00000357348 MBD5Q9P267 1494 aa18.34■□□□□ 0.53
RTFDC1-202ENST00000357348 DIP2BQ9P265 1576 aa18.33■□□□□ 0.53
RTFDC1-202ENST00000357348 TSPY4P0CV99 314 aa18.33■□□□□ 0.53
RTFDC1-202ENST00000357348 TSPY10P0CW01 314 aa18.33■□□□□ 0.53
RTFDC1-202ENST00000357348 CROCC2H7BZ55 1655 aa18.33■□□□□ 0.52
RTFDC1-202ENST00000357348 DHX57Q6P158 1386 aaKnown RBP18.31■□□□□ 0.52
RTFDC1-202ENST00000357348 AFAP1Q8N556 730 aa18.31■□□□□ 0.52
RTFDC1-202ENST00000357348 NAIPQ13075 1403 aa18.3■□□□□ 0.52
RTFDC1-202ENST00000357348 ABCC1P33527 1531 aa18.3■□□□□ 0.52
RTFDC1-202ENST00000357348 CCDC141Q6ZP82 1450 aa18.3■□□□□ 0.52
RTFDC1-202ENST00000357348 MAP3K4Q9Y6R4 1608 aa18.29■□□□□ 0.52
RTFDC1-202ENST00000357348 HFM1A2PYH4 1435 aa18.29■□□□□ 0.52
RTFDC1-202ENST00000357348 AKNAQ7Z591 1439 aa18.29■□□□□ 0.52
RTFDC1-202ENST00000357348 TRAPPC8Q9Y2L5 1435 aa18.29■□□□□ 0.52
RTFDC1-202ENST00000357348 ARAP3Q8WWN8 1544 aa18.29■□□□□ 0.52
RTFDC1-202ENST00000357348 C9orf84Q5VXU9 1444 aa18.29■□□□□ 0.52
RTFDC1-202ENST00000357348 ADGRL1O94910 1474 aa18.29■□□□□ 0.52
RTFDC1-202ENST00000357348 KIF13AQ9H1H9 1805 aa18.28■□□□□ 0.52
RTFDC1-202ENST00000357348 ARHGEF5Q12774 1597 aa18.28■□□□□ 0.52
RTFDC1-202ENST00000357348 SCAPERQ9BY12 1400 aa18.28■□□□□ 0.52
RTFDC1-202ENST00000357348 KDM6BO15054 1643 aa18.28■□□□□ 0.52
RTFDC1-202ENST00000357348 MYT1LQ9UL68 1186 aa18.27■□□□□ 0.52
RTFDC1-202ENST00000357348 PLEKHH2Q8IVE3 1493 aa18.27■□□□□ 0.52
RTFDC1-202ENST00000357348 KIAA1107Q9UPP5 1409 aa18.27■□□□□ 0.51
RTFDC1-202ENST00000357348 ADGBQ8N7X0 1667 aa18.27■□□□□ 0.51
RTFDC1-202ENST00000357348 GLI2P10070 1586 aa18.26■□□□□ 0.51
RTFDC1-202ENST00000357348 NCOA1Q15788 1441 aa18.25■□□□□ 0.51
RTFDC1-202ENST00000357348 GCC2Q8IWJ2 1684 aa18.25■□□□□ 0.51
RTFDC1-202ENST00000357348 RSPH4AQ5TD94 716 aa18.25■□□□□ 0.51
RTFDC1-202ENST00000357348 ANKRD30AQ9BXX3 1397 aa18.24■□□□□ 0.51
RTFDC1-202ENST00000357348 TRHP20396 242 aaPredicted RBP18.23■□□□□ 0.51
RTFDC1-202ENST00000357348 ROCK1Q13464 1354 aa18.23■□□□□ 0.51
RTFDC1-202ENST00000357348 SHANK2Q9UPX8 1470 aa18.22■□□□□ 0.51
RTFDC1-202ENST00000357348 RAPGEF3O95398 923 aa18.22■□□□□ 0.51
RTFDC1-202ENST00000357348 TRIM52Q96A61 297 aa18.22■□□□□ 0.51
RTFDC1-202ENST00000357348 CFAP74Q9C0B2 1584 aa18.21■□□□□ 0.51
RTFDC1-202ENST00000357348 SPAG9O60271 1321 aaKnown RBP18.2■□□□□ 0.5
RTFDC1-202ENST00000357348 KIF15Q9NS87 1388 aa18.2■□□□□ 0.5
RTFDC1-202ENST00000357348 ADGRL2O95490 1459 aa18.2■□□□□ 0.5
RTFDC1-202ENST00000357348 PPRC1Q5VV67 1664 aaKnown RBP18.2■□□□□ 0.5
RTFDC1-202ENST00000357348 NEO1Q92859 1461 aa18.17■□□□□ 0.5
RTFDC1-202ENST00000357348 ANKRD50Q9ULJ7 1429 aa18.16■□□□□ 0.5
RTFDC1-202ENST00000357348 MAST1Q9Y2H9 1570 aa18.15■□□□□ 0.5
RTFDC1-202ENST00000357348 POGZQ7Z3K3 1410 aa18.13■□□□□ 0.49
RTFDC1-202ENST00000357348 ZNF518AQ6AHZ1 1483 aa18.13■□□□□ 0.49
RTFDC1-202ENST00000357348 ZFYVE16Q7Z3T8 1539 aa18.13■□□□□ 0.49
RTFDC1-202ENST00000357348 SUPT16HQ9Y5B9 1047 aaKnown RBP18.13■□□□□ 0.49
RTFDC1-202ENST00000357348 DENND4BO75064 1496 aaPredicted RBP18.12■□□□□ 0.49
RTFDC1-202ENST00000357348 ATP7AQ04656 1500 aa18.12■□□□□ 0.49
RTFDC1-202ENST00000357348 TEX14Q8IWB6 1497 aa18.11■□□□□ 0.49
RTFDC1-202ENST00000357348 PLXNC1O60486 1568 aa18.1■□□□□ 0.49
RTFDC1-202ENST00000357348 INO80Q9ULG1 1556 aaPredicted RBP18.1■□□□□ 0.49
RTFDC1-202ENST00000357348 KIDINS220Q9ULH0 1771 aa18.1■□□□□ 0.49
RTFDC1-202ENST00000357348 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.1■□□□□ 0.492e-8■■■□□ 14.7
RTFDC1-202ENST00000357348 RICTORQ6R327 1708 aa18.09■□□□□ 0.49
RTFDC1-202ENST00000357348 FOXD1Q16676 465 aa18.08■□□□□ 0.49
RTFDC1-202ENST00000357348 RTEL1-TNFRSF6BF6WH68 1400 aa18.07■□□□□ 0.48
RTFDC1-202ENST00000357348 KDM5CP41229 1560 aa18.07■□□□□ 0.48
RTFDC1-202ENST00000357348 MPHOSPH9Q99550 1183 aa18.06■□□□□ 0.48
RTFDC1-202ENST00000357348 DUOX2Q9NRD8 1548 aa18.06■□□□□ 0.48
RTFDC1-202ENST00000357348 HECW2Q9P2P5 1572 aa18.05■□□□□ 0.48
RTFDC1-202ENST00000357348 SLC4A1APQ9BWU0 796 aaKnown RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms