RNA–Protein interactions for RNA: ENST00000356100.6

PTPRT-201, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRT, Length 12,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-201ENST00000356100 NOP58Q9Y2X3 529 aaKnown RBP7.65□□□□□ -1.18
PTPRT-201ENST00000356100 HSP90AB1P08238 724 aaKnown RBP7.65□□□□□ -1.18
PTPRT-201ENST00000356100 SMARCA4P51532 1647 aa7.64□□□□□ -1.19
PTPRT-201ENST00000356100 SENP3-EIF4A1A0A087X0R7 540 aa7.64□□□□□ -1.19
PTPRT-201ENST00000356100 HDGFL2Q7Z4V5 671 aaPredicted RBP7.64□□□□□ -1.19
PTPRT-201ENST00000356100 SENP3Q9H4L4 574 aaPredicted RBP7.64□□□□□ -1.19
PTPRT-201ENST00000356100 SYAP1Q96A49 352 aaPredicted RBP7.63□□□□□ -1.19
PTPRT-201ENST00000356100 GPATCH3Q96I76 525 aa7.63□□□□□ -1.19
PTPRT-201ENST00000356100 CUX1P39880 1505 aa7.63□□□□□ -1.19
PTPRT-201ENST00000356100 RTF1Q92541 710 aaKnown RBP7.63□□□□□ -1.19
PTPRT-201ENST00000356100 USP35Q9P2H5 1018 aa7.63□□□□□ -1.19
PTPRT-201ENST00000356100 KIAA1211Q6ZU35 1233 aa7.62□□□□□ -1.19
PTPRT-201ENST00000356100 GBP4Q96PP9 640 aa7.62□□□□□ -1.19
PTPRT-201ENST00000356100 CCDC88BA6NC98 1476 aa7.62□□□□□ -1.19
PTPRT-201ENST00000356100 RAPGEF2Q9Y4G8 1499 aa7.62□□□□□ -1.19
PTPRT-201ENST00000356100 SPAG9O60271 1321 aaKnown RBP7.62□□□□□ -1.19
PTPRT-201ENST00000356100 MORC1Q86VD1 984 aa7.62□□□□□ -1.19
PTPRT-201ENST00000356100 LMOD3Q0VAK6 560 aa7.62□□□□□ -1.19
PTPRT-201ENST00000356100 FRAT1Q92837 279 aaPredicted RBP7.61□□□□□ -1.19
PTPRT-201ENST00000356100 KIAA2012Q0VF49 1180 aa7.61□□□□□ -1.19
PTPRT-201ENST00000356100 MSNP26038 577 aaKnown RBP7.61□□□□□ -1.19
PTPRT-201ENST00000356100 CHMP4CQ96CF2 233 aa7.61□□□□□ -1.19
PTPRT-201ENST00000356100 DCAF11Q8TEB1 546 aa7.61□□□□□ -1.19
PTPRT-201ENST00000356100 U2SURPO15042 1029 aaKnown RBP7.6□□□□□ -1.19
PTPRT-201ENST00000356100 HMMRO75330 724 aa7.6□□□□□ -1.19
PTPRT-201ENST00000356100 SRPK2P78362 688 aaKnown RBP7.6□□□□□ -1.19
PTPRT-201ENST00000356100 SUPT16HQ9Y5B9 1047 aaKnown RBP7.6□□□□□ -1.19
PTPRT-201ENST00000356100 CSPP1Q1MSJ5 1256 aa7.59□□□□□ -1.19
PTPRT-201ENST00000356100 TERF2IPQ9NYB0 399 aa7.59□□□□□ -1.19
PTPRT-201ENST00000356100 WIZO95785 1651 aa7.59□□□□□ -1.19
PTPRT-201ENST00000356100 GNL2Q13823 731 aaKnown RBP7.59□□□□□ -1.19
PTPRT-201ENST00000356100 HIRIP3Q9BW71 556 aaPredicted RBP7.59□□□□□ -1.19
PTPRT-201ENST00000356100 RWDD1Q9H446 243 aaPredicted RBP7.59□□□□□ -1.19
PTPRT-201ENST00000356100 LAS1LQ9Y4W2 734 aaKnown RBP7.59□□□□□ -1.19
PTPRT-201ENST00000356100 PDE3BQ13370 1112 aa7.59□□□□□ -1.19
PTPRT-201ENST00000356100 RGS3P49796 1198 aa7.59□□□□□ -1.19
PTPRT-201ENST00000356100 SOGA1O94964 1423 aa7.58□□□□□ -1.2
PTPRT-201ENST00000356100 MROH2BQ7Z745 1585 aa7.58□□□□□ -1.2
PTPRT-201ENST00000356100 TMX4Q9H1E5 349 aaPredicted RBP7.58□□□□□ -1.2
PTPRT-201ENST00000356100 NEUROD2Q15784 382 aa7.58□□□□□ -1.2
PTPRT-201ENST00000356100 CECR2Q9BXF3 1484 aa7.58□□□□□ -1.2
PTPRT-201ENST00000356100 TPM4P67936 248 aa7.58□□□□□ -1.2
PTPRT-201ENST00000356100 EFCAB2Q5VUJ9 269 aa7.58□□□□□ -1.2
PTPRT-201ENST00000356100 PHF14O94880 888 aa7.57□□□□□ -1.2
PTPRT-201ENST00000356100 CC2D1BQ5T0F9 858 aaKnown RBP7.57□□□□□ -1.2
PTPRT-201ENST00000356100 LMOD2Q6P5Q4 547 aa7.57□□□□□ -1.2
PTPRT-201ENST00000356100 KIF3AQ9Y496 699 aa7.57□□□□□ -1.2
PTPRT-201ENST00000356100 NAP1L5Q96NT1 182 aaPredicted RBP7.57□□□□□ -1.2
PTPRT-201ENST00000356100 STK31Q9BXU1 1019 aa7.57□□□□□ -1.2
PTPRT-201ENST00000356100 NUP155O75694 1391 aa7.56□□□□□ -1.2
PTPRT-201ENST00000356100 PMFBP1Q8TBY8 1022 aa7.56□□□□□ -1.2
PTPRT-201ENST00000356100 TCERG1O14776 1098 aaKnown RBP7.56□□□□□ -1.2
PTPRT-201ENST00000356100 NGEFQ8N5V2 710 aa7.56□□□□□ -1.2
PTPRT-201ENST00000356100 CCDC144AA2RUR9 1427 aa7.56□□□□□ -1.2
PTPRT-201ENST00000356100 KIF15Q9NS87 1388 aa7.56□□□□□ -1.2
PTPRT-201ENST00000356100 RAB3GAP2Q9H2M9 1393 aa7.55□□□□□ -1.2
PTPRT-201ENST00000356100 NLRP13Q86W25 1043 aa7.54□□□□□ -1.2
PTPRT-201ENST00000356100 PKD2Q13563 968 aa7.54□□□□□ -1.2
PTPRT-201ENST00000356100 NAP1L2Q9ULW6 460 aaPredicted RBP7.54□□□□□ -1.2
PTPRT-201ENST00000356100 EID1Q9Y6B2 187 aa7.54□□□□□ -1.2
PTPRT-201ENST00000356100 CADPSQ9ULU8 1353 aa7.54□□□□□ -1.2
PTPRT-201ENST00000356100 ANO8Q9HCE9 1232 aaPredicted RBP7.53□□□□□ -1.2
PTPRT-201ENST00000356100 DRC7Q8IY82 874 aa7.53□□□□□ -1.2
PTPRT-201ENST00000356100 PRDM2Q13029 1718 aa7.53□□□□□ -1.2
PTPRT-201ENST00000356100 RCAN3Q9UKA8 241 aa7.53□□□□□ -1.2
PTPRT-201ENST00000356100 STAC3Q96MF2 364 aa7.52□□□□□ -1.21
PTPRT-201ENST00000356100 PLCB2Q00722 1185 aa7.52□□□□□ -1.21
PTPRT-201ENST00000356100 ROCK1Q13464 1354 aa7.52□□□□□ -1.21
PTPRT-201ENST00000356100 LRRFIP1Q32MZ4 808 aaKnown RBP7.52□□□□□ -1.21
PTPRT-201ENST00000356100 ITPRIPQ8IWB1 547 aa7.52□□□□□ -1.21
PTPRT-201ENST00000356100 SCAPERQ9BY12 1400 aa7.51□□□□□ -1.21
PTPRT-201ENST00000356100 ATP6V1DQ9Y5K8 247 aa7.51□□□□□ -1.21
PTPRT-201ENST00000356100 ST18O60284 1047 aa7.51□□□□□ -1.21
PTPRT-201ENST00000356100 SIN3AQ96ST3 1273 aa7.51□□□□□ -1.21
PTPRT-201ENST00000356100 U2AF1L5P0DN76 240 aaPredicted RBP7.51□□□□□ -1.21
PTPRT-201ENST00000356100 U2AF1Q01081 240 aaKnown RBP eCLIP7.51□□□□□ -1.21
PTPRT-201ENST00000356100 CGNL1Q0VF96 1302 aa7.51□□□□□ -1.21
PTPRT-201ENST00000356100 AAMPQ13685 434 aa7.51□□□□□ -1.21
PTPRT-201ENST00000356100 MPHOSPH9Q99550 1183 aa7.5□□□□□ -1.21
PTPRT-201ENST00000356100 HSPA5P11021 654 aaKnown RBP7.5□□□□□ -1.21
PTPRT-201ENST00000356100 WWC1Q8IX03 1113 aa7.5□□□□□ -1.21
PTPRT-201ENST00000356100 NOC3LQ8WTT2 800 aaKnown RBP7.5□□□□□ -1.21
PTPRT-201ENST00000356100 DDX11L8A8MPP1 907 aa7.5□□□□□ -1.21
PTPRT-201ENST00000356100 CLSTN1O94985 981 aa7.5□□□□□ -1.21
PTPRT-201ENST00000356100 CENPJQ9HC77 1338 aaPredicted RBP7.49□□□□□ -1.21
PTPRT-201ENST00000356100 KIF21BO75037 1637 aa7.49□□□□□ -1.21
PTPRT-201ENST00000356100 PLEKHG5O94827 1062 aa7.49□□□□□ -1.21
PTPRT-201ENST00000356100 GOLGA6L1Q8N7Z2 621 aa7.48□□□□□ -1.21
PTPRT-201ENST00000356100 KIF16BQ96L93 1317 aa7.48□□□□□ -1.21
PTPRT-201ENST00000356100 MYBBP1AQ9BQG0 1328 aaKnown RBP7.48□□□□□ -1.21
PTPRT-201ENST00000356100 ERICH3Q5RHP9 1530 aa7.48□□□□□ -1.21
PTPRT-201ENST00000356100 MYOM3Q5VTT5 1437 aa7.47□□□□□ -1.21
PTPRT-201ENST00000356100 GORABQ5T7V8 394 aa7.47□□□□□ -1.21
PTPRT-201ENST00000356100 WASHC2CQ9Y4E1 1318 aa7.47□□□□□ -1.21
PTPRT-201ENST00000356100 GGT6Q6P531 493 aa7.47□□□□□ -1.21
PTPRT-201ENST00000356100 CSB-PGBD3P0DP91 1061 aa7.47□□□□□ -1.21
PTPRT-201ENST00000356100 EFCAB5A4FU69 1503 aa7.47□□□□□ -1.21
PTPRT-201ENST00000356100 B4GALNT3Q6L9W6 998 aa7.47□□□□□ -1.21
PTPRT-201ENST00000356100 SMC4Q9NTJ3 1288 aa7.47□□□□□ -1.21
PTPRT-201ENST00000356100 MIA2Q96PC5 1412 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms