RNA–Protein interactions for RNA: ENST00000356093.6

EPB41-204, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 5 BASIC

Gene EPB41, Length 5,857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-204ENST00000356093 CALD1Q05682 793 aaKnown RBP12.04□□□□□ -0.48
EPB41-204ENST00000356093 NEUROD2Q15784 382 aa12.04□□□□□ -0.48
EPB41-204ENST00000356093 PHLDB1Q86UU1 1377 aa12.04□□□□□ -0.48
EPB41-204ENST00000356093 FHOD3Q2V2M9 1422 aa12.04□□□□□ -0.48
EPB41-204ENST00000356093 ZRSR1Q15695 479 aaKnown RBP12.03□□□□□ -0.48
EPB41-204ENST00000356093 NUP155O75694 1391 aa12.03□□□□□ -0.48
EPB41-204ENST00000356093 HSP90AB1P08238 724 aaKnown RBP12.03□□□□□ -0.48
EPB41-204ENST00000356093 U2SURPO15042 1029 aaKnown RBP12.02□□□□□ -0.48
EPB41-204ENST00000356093 RGS3P49796 1198 aa12.02□□□□□ -0.48
EPB41-204ENST00000356093 PTMSP20962 102 aa12.02□□□□□ -0.49
EPB41-204ENST00000356093 B4GALNT3Q6L9W6 998 aa12.01□□□□□ -0.49
EPB41-204ENST00000356093 HSCBQ8IWL3 235 aa12.01□□□□□ -0.49
EPB41-204ENST00000356093 PTMAP06454 111 aaKnown RBP12.01□□□□□ -0.49
EPB41-204ENST00000356093 CHMP4AQ9BY43 222 aa12.01□□□□□ -0.49
EPB41-204ENST00000356093 TDRD9Q8NDG6 1382 aaKnown RBP12.01□□□□□ -0.49
EPB41-204ENST00000356093 CUX1P39880 1505 aa12.01□□□□□ -0.49
EPB41-204ENST00000356093 PDE3BQ13370 1112 aa12.01□□□□□ -0.49
EPB41-204ENST00000356093 HDGFL2Q7Z4V5 671 aaPredicted RBP12.01□□□□□ -0.49
EPB41-204ENST00000356093 IPO8O15397 1037 aaKnown RBP12□□□□□ -0.49
EPB41-204ENST00000356093 L1TD1Q5T7N2 865 aaKnown RBP11.99□□□□□ -0.49
EPB41-204ENST00000356093 MCCP23508 829 aa11.99□□□□□ -0.49
EPB41-204ENST00000356093 DHX57Q6P158 1386 aaKnown RBP11.99□□□□□ -0.49
EPB41-204ENST00000356093 SRPK2P78362 688 aaKnown RBP11.99□□□□□ -0.49
EPB41-204ENST00000356093 FANCD2Q9BXW9 1451 aa11.99□□□□□ -0.49
EPB41-204ENST00000356093 TCERG1O14776 1098 aaKnown RBP11.99□□□□□ -0.49
EPB41-204ENST00000356093 GOLGA6L6A8MZA4 724 aa11.98□□□□□ -0.49
EPB41-204ENST00000356093 RCAN3Q9UKA8 241 aa11.98□□□□□ -0.49
EPB41-204ENST00000356093 UACAQ9BZF9 1416 aa11.97□□□□□ -0.49
EPB41-204ENST00000356093 KIF15Q9NS87 1388 aa11.97□□□□□ -0.49
EPB41-204ENST00000356093 KIF21BO75037 1637 aa11.97□□□□□ -0.49
EPB41-204ENST00000356093 SENP3Q9H4L4 574 aaPredicted RBP11.96□□□□□ -0.49
EPB41-204ENST00000356093 OS9Q13438 667 aaPredicted RBP11.96□□□□□ -0.5
EPB41-204ENST00000356093 PMFBP1Q8TBY8 1022 aa11.95□□□□□ -0.5
EPB41-204ENST00000356093 RBM19Q9Y4C8 960 aaKnown RBP11.95□□□□□ -0.5
EPB41-204ENST00000356093 RWDD1Q9H446 243 aaPredicted RBP11.94□□□□□ -0.5
EPB41-204ENST00000356093 SENP3-EIF4A1A0A087X0R7 540 aa11.94□□□□□ -0.5
EPB41-204ENST00000356093 NLRP13Q86W25 1043 aa11.93□□□□□ -0.5
EPB41-204ENST00000356093 FOXD1Q16676 465 aa11.93□□□□□ -0.5
EPB41-204ENST00000356093 A0A0G2JS52 829 aa11.93□□□□□ -0.5
EPB41-204ENST00000356093 RTF1Q92541 710 aaKnown RBP11.92□□□□□ -0.5
EPB41-204ENST00000356093 ERICH3Q5RHP9 1530 aa11.92□□□□□ -0.5
EPB41-204ENST00000356093 L3MBTL2Q969R5 705 aa11.92□□□□□ -0.5
EPB41-204ENST00000356093 RUSC2Q8N2Y8 1516 aa11.91□□□□□ -0.5
EPB41-204ENST00000356093 DNTTIP2Q5QJE6 756 aaKnown RBP11.91□□□□□ -0.5
EPB41-204ENST00000356093 MYBBP1AQ9BQG0 1328 aaKnown RBP11.91□□□□□ -0.5
EPB41-204ENST00000356093 CCDC144AA2RUR9 1427 aa11.9□□□□□ -0.5
EPB41-204ENST00000356093 PODXL2Q9NZ53 605 aa11.9□□□□□ -0.5
EPB41-204ENST00000356093 NRDCO43847 1150 aa11.9□□□□□ -0.5
EPB41-204ENST00000356093 TERF2IPQ9NYB0 399 aa11.9□□□□□ -0.5
EPB41-204ENST00000356093 HDAC5Q9UQL6 1122 aa11.9□□□□□ -0.5
EPB41-204ENST00000356093 SPAG9O60271 1321 aaKnown RBP11.9□□□□□ -0.51
EPB41-204ENST00000356093 STAC3Q96MF2 364 aa11.89□□□□□ -0.51
EPB41-204ENST00000356093 FGD5Q6ZNL6 1462 aa11.89□□□□□ -0.51
EPB41-204ENST00000356093 KCNJ4P48050 445 aa11.89□□□□□ -0.51
EPB41-204ENST00000356093 NGEFQ8N5V2 710 aa11.89□□□□□ -0.51
EPB41-204ENST00000356093 NCAPD3P42695 1498 aa11.88□□□□□ -0.51
EPB41-204ENST00000356093 GOLGA2Q08379 1002 aa11.88□□□□□ -0.51
EPB41-204ENST00000356093 LMOD3Q0VAK6 560 aa11.88□□□□□ -0.51
EPB41-204ENST00000356093 GGT6Q6P531 493 aa11.88□□□□□ -0.51
EPB41-204ENST00000356093 GBP4Q96PP9 640 aa11.88□□□□□ -0.51
EPB41-204ENST00000356093 MYOM3Q5VTT5 1437 aa11.87□□□□□ -0.51
EPB41-204ENST00000356093 FGD1P98174 961 aa11.87□□□□□ -0.51
EPB41-204ENST00000356093 PLEKHG5O94827 1062 aa11.87□□□□□ -0.51
EPB41-204ENST00000356093 CALRP27797 417 aaKnown RBP11.87□□□□□ -0.51
EPB41-204ENST00000356093 NAP1L5Q96NT1 182 aaPredicted RBP11.87□□□□□ -0.51
EPB41-204ENST00000356093 RTN4Q9NQC3 1192 aaKnown RBP11.87□□□□□ -0.51
EPB41-204ENST00000356093 GAPVD1Q14C86 1478 aa11.87□□□□□ -0.51
EPB41-204ENST00000356093 HNRNPMP52272 730 aaKnown RBP eCLIP11.86□□□□□ -0.511e-6■■■□□ 18.9
EPB41-204ENST00000356093 U2AF1L5P0DN76 240 aaPredicted RBP11.86□□□□□ -0.51
EPB41-204ENST00000356093 U2AF1Q01081 240 aaKnown RBP eCLIP11.86□□□□□ -0.511e-6■■■□□ 14.9
EPB41-204ENST00000356093 JPH4Q96JJ6 628 aa11.86□□□□□ -0.51
EPB41-204ENST00000356093 FYCO1Q9BQS8 1478 aa11.85□□□□□ -0.51
EPB41-204ENST00000356093 GOLGA6L4A6NEF3 574 aa11.85□□□□□ -0.51
EPB41-204ENST00000356093 LMOD2Q6P5Q4 547 aa11.85□□□□□ -0.51
EPB41-204ENST00000356093 ITPRIPQ8IWB1 547 aa11.85□□□□□ -0.51
EPB41-204ENST00000356093 FGD6Q6ZV73 1430 aa11.84□□□□□ -0.51
EPB41-204ENST00000356093 DEKP35659 375 aaKnown RBP11.84□□□□□ -0.51
EPB41-204ENST00000356093 IGF1RP08069 1367 aa11.84□□□□□ -0.51
EPB41-204ENST00000356093 KIF3BO15066 747 aa11.83□□□□□ -0.51
EPB41-204ENST00000356093 CHAF1AQ13111 956 aaPredicted RBP11.83□□□□□ -0.51
EPB41-204ENST00000356093 LRRC9Q6ZRR7 1453 aa11.83□□□□□ -0.52
EPB41-204ENST00000356093 CENPJQ9HC77 1338 aaPredicted RBP11.83□□□□□ -0.52
EPB41-204ENST00000356093 STK26Q9P289 416 aa11.83□□□□□ -0.52
EPB41-204ENST00000356093 CASKIN1Q8WXD9 1431 aa11.83□□□□□ -0.52
EPB41-204ENST00000356093 ZBED9Q6R2W3 1325 aa11.83□□□□□ -0.52
EPB41-204ENST00000356093 MSNP26038 577 aaKnown RBP11.83□□□□□ -0.52
EPB41-204ENST00000356093 EFCAB5A4FU69 1503 aa11.83□□□□□ -0.52
EPB41-204ENST00000356093 IPO9Q96P70 1041 aaKnown RBP11.83□□□□□ -0.52
EPB41-204ENST00000356093 KIAA1211Q6ZU35 1233 aa11.82□□□□□ -0.52
EPB41-204ENST00000356093 PTPRGP23470 1445 aa11.82□□□□□ -0.52
EPB41-204ENST00000356093 HMMRO75330 724 aa11.82□□□□□ -0.52
EPB41-204ENST00000356093 SAFB2Q14151 953 aaKnown RBP eCLIP11.82□□□□□ -0.52
EPB41-204ENST00000356093 USP47Q96K76 1375 aa11.81□□□□□ -0.52
EPB41-204ENST00000356093 TSHZ2Q9NRE2 1034 aa11.81□□□□□ -0.52
EPB41-204ENST00000356093 HTATSF1O43719 755 aaKnown RBP11.81□□□□□ -0.52
EPB41-204ENST00000356093 MIA2Q96PC5 1412 aa11.81□□□□□ -0.52
EPB41-204ENST00000356093 SYAP1Q96A49 352 aaPredicted RBP11.8□□□□□ -0.52
EPB41-204ENST00000356093 SMC4Q9NTJ3 1288 aa11.8□□□□□ -0.52
EPB41-204ENST00000356093 MLECQ14165 292 aa11.8□□□□□ -0.52
EPB41-204ENST00000356093 GPATCH3Q96I76 525 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms