RNA–Protein interactions for RNA: ENST00000356073.8

TCF4-202, Transcript of transcription factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF4, Length 8,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-202ENST00000356073 TRIM34Q9BYJ4 488 aa14.37□□□□□ -0.11
TCF4-202ENST00000356073 PODXL2Q9NZ53 605 aa14.37□□□□□ -0.11
TCF4-202ENST00000356073 NUDCQ9Y266 331 aa14.36□□□□□ -0.11
TCF4-202ENST00000356073 CFAP44Q96MT7 982 aa14.34□□□□□ -0.11
TCF4-202ENST00000356073 GON4LQ3T8J9 2241 aa14.34□□□□□ -0.11
TCF4-202ENST00000356073 HSP90AB1P08238 724 aaKnown RBP14.34□□□□□ -0.11
TCF4-202ENST00000356073 U2SURPO15042 1029 aaKnown RBP14.34□□□□□ -0.11
TCF4-202ENST00000356073 MRS2Q9HD23 443 aa14.33□□□□□ -0.12
TCF4-202ENST00000356073 PPP4R2Q9NY27 417 aa14.32□□□□□ -0.12
TCF4-202ENST00000356073 HDGFP51858 240 aaKnown RBP14.32□□□□□ -0.12
TCF4-202ENST00000356073 WDR70Q9NW82 654 aa14.32□□□□□ -0.12
TCF4-202ENST00000356073 RTF1Q92541 710 aaKnown RBP14.31□□□□□ -0.12
TCF4-202ENST00000356073 NOP58Q9Y2X3 529 aaKnown RBP14.31□□□□□ -0.12
TCF4-202ENST00000356073 PPM1FP49593 454 aaPredicted RBP14.3□□□□□ -0.12
TCF4-202ENST00000356073 TOMM22Q9NS69 142 aa14.29□□□□□ -0.12
TCF4-202ENST00000356073 KNSTRNQ9Y448 316 aa14.29□□□□□ -0.12
TCF4-202ENST00000356073 DDX10Q13206 875 aaKnown RBP14.29□□□□□ -0.12
TCF4-202ENST00000356073 MCCP23508 829 aa14.29□□□□□ -0.12
TCF4-202ENST00000356073 HSP90B1P14625 803 aaKnown RBP14.28□□□□□ -0.12
TCF4-202ENST00000356073 GOLGA6L1Q8N7Z2 621 aa14.28□□□□□ -0.12
TCF4-202ENST00000356073 PRKCSHP14314 528 aaPredicted RBP14.28□□□□□ -0.12
TCF4-202ENST00000356073 CCAR1Q8IX12 1150 aaKnown RBP14.28□□□□□ -0.12
TCF4-202ENST00000356073 CCDC34Q96HJ3 373 aa14.28□□□□□ -0.12
TCF4-202ENST00000356073 FRAT1Q92837 279 aaPredicted RBP14.27□□□□□ -0.12
TCF4-202ENST00000356073 SAMD1Q6SPF0 538 aaPredicted RBP14.27□□□□□ -0.12
TCF4-202ENST00000356073 FBXW7Q969H0 707 aa14.27□□□□□ -0.12
TCF4-202ENST00000356073 KIAA1211Q6ZU35 1233 aa14.27□□□□□ -0.13
TCF4-202ENST00000356073 GOLGA6L3A6NEY3 463 aa14.27□□□□□ -0.13
TCF4-202ENST00000356073 CHMP4BQ9H444 224 aaKnown RBP14.27□□□□□ -0.13
TCF4-202ENST00000356073 PATL2C9JE40 543 aaKnown RBP14.26□□□□□ -0.13
TCF4-202ENST00000356073 SENP3-EIF4A1A0A087X0R7 540 aa14.26□□□□□ -0.13
TCF4-202ENST00000356073 SRPK2P78362 688 aaKnown RBP14.26□□□□□ -0.13
TCF4-202ENST00000356073 PPP1R1BQ9UD71 204 aaPredicted RBP14.26□□□□□ -0.13
TCF4-202ENST00000356073 HSP90AA2PQ14568 343 aaPredicted RBP14.26□□□□□ -0.13
TCF4-202ENST00000356073 PES1O00541 588 aaKnown RBP14.25□□□□□ -0.13
TCF4-202ENST00000356073 IRX6P78412 446 aaPredicted RBP14.24□□□□□ -0.13
TCF4-202ENST00000356073 ABCC9O60706 1549 aa14.23□□□□□ -0.13
TCF4-202ENST00000356073 APBB1O00213 710 aa14.23□□□□□ -0.13
TCF4-202ENST00000356073 CDCA8Q53HL2 280 aa14.23□□□□□ -0.13
TCF4-202ENST00000356073 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.23□□□□□ -0.13
TCF4-202ENST00000356073 R3HCC1Q9Y3T6 440 aaKnown RBP14.22□□□□□ -0.13
TCF4-202ENST00000356073 HOMEZQ8IX15 550 aa14.22□□□□□ -0.13
TCF4-202ENST00000356073 FOXD1Q16676 465 aa14.21□□□□□ -0.13
TCF4-202ENST00000356073 CCDC43Q96MW1 224 aaKnown RBP14.21□□□□□ -0.13
TCF4-202ENST00000356073 PKNOX2Q96KN3 472 aa14.21□□□□□ -0.14
TCF4-202ENST00000356073 TPM4P67936 248 aa14.2□□□□□ -0.14
TCF4-202ENST00000356073 MTERF4Q7Z6M4 381 aaKnown RBP14.2□□□□□ -0.14
TCF4-202ENST00000356073 AK7Q96M32 723 aa14.2□□□□□ -0.14
TCF4-202ENST00000356073 NOL10Q9BSC4 688 aaKnown RBP14.18□□□□□ -0.14
TCF4-202ENST00000356073 SAFB2Q14151 953 aaKnown RBP eCLIP14.18□□□□□ -0.14
TCF4-202ENST00000356073 EVA1CP58658 441 aa14.17□□□□□ -0.14
TCF4-202ENST00000356073 TPM3P06753 285 aa14.17□□□□□ -0.14
TCF4-202ENST00000356073 CCDC97Q96F63 343 aaPredicted RBP14.17□□□□□ -0.14
TCF4-202ENST00000356073 DEKP35659 375 aaKnown RBP14.16□□□□□ -0.14
TCF4-202ENST00000356073 WWC2Q6AWC2 1192 aa14.15□□□□□ -0.14
TCF4-202ENST00000356073 APPP05067 770 aa14.15□□□□□ -0.14
TCF4-202ENST00000356073 RGS3P49796 1198 aa14.15□□□□□ -0.14
TCF4-202ENST00000356073 SYAP1Q96A49 352 aaPredicted RBP14.15□□□□□ -0.14
TCF4-202ENST00000356073 PLEKHD1A6NEE1 506 aa14.15□□□□□ -0.14
TCF4-202ENST00000356073 HTATSF1O43719 755 aaKnown RBP14.15□□□□□ -0.14
TCF4-202ENST00000356073 SF3B2Q13435 895 aaKnown RBP14.15□□□□□ -0.15
TCF4-202ENST00000356073 RRP12Q5JTH9 1297 aaKnown RBP14.14□□□□□ -0.15
TCF4-202ENST00000356073 AMOTL1Q8IY63 956 aa14.14□□□□□ -0.15
TCF4-202ENST00000356073 NOM1Q5C9Z4 860 aaKnown RBP14.13□□□□□ -0.15
TCF4-202ENST00000356073 DHX16O60231 1041 aaKnown RBP14.13□□□□□ -0.15
TCF4-202ENST00000356073 TPD52L1Q16890 204 aaPredicted RBP14.13□□□□□ -0.15
TCF4-202ENST00000356073 ODF2Q5BJF6 829 aa14.12□□□□□ -0.15
TCF4-202ENST00000356073 TMEM132AQ24JP5 1023 aa14.12□□□□□ -0.15
TCF4-202ENST00000356073 PHF14O94880 888 aa14.11□□□□□ -0.15
TCF4-202ENST00000356073 MAP7D2Q96T17 732 aa14.11□□□□□ -0.15
TCF4-202ENST00000356073 MS4A1P11836 297 aa14.11□□□□□ -0.15
TCF4-202ENST00000356073 MYH9P35579 1960 aaKnown RBP14.1□□□□□ -0.15
TCF4-202ENST00000356073 TSR1Q2NL82 804 aaKnown RBP14.1□□□□□ -0.15
TCF4-202ENST00000356073 GPATCH3Q96I76 525 aa14.09□□□□□ -0.15
TCF4-202ENST00000356073 HSCBQ8IWL3 235 aa14.09□□□□□ -0.15
TCF4-202ENST00000356073 STK26Q9P289 416 aa14.08□□□□□ -0.15
TCF4-202ENST00000356073 SYTL4Q96C24 671 aaPredicted RBP14.08□□□□□ -0.16
TCF4-202ENST00000356073 AKAP17AQ02040 695 aaKnown RBP14.08□□□□□ -0.16
TCF4-202ENST00000356073 GPS2Q13227 327 aa14.08□□□□□ -0.16
TCF4-202ENST00000356073 CT47A1Q5JQC4 288 aaPredicted RBP14.07□□□□□ -0.16
TCF4-202ENST00000356073 SPRYD3Q8NCJ5 442 aa14.07□□□□□ -0.16
TCF4-202ENST00000356073 GBP4Q96PP9 640 aa14.07□□□□□ -0.16
TCF4-202ENST00000356073 SPDYE4A6NLX3 237 aa14.07□□□□□ -0.16
TCF4-202ENST00000356073 TPM2P07951 284 aa14.07□□□□□ -0.16
TCF4-202ENST00000356073 ARID3AQ99856 593 aa14.06□□□□□ -0.16
TCF4-202ENST00000356073 ZFYVE27Q5T4F4 411 aa14.06□□□□□ -0.16
TCF4-202ENST00000356073 RRP7BPQ9NSQ0 103 aa14.06□□□□□ -0.16
TCF4-202ENST00000356073 MTUS2Q5JR59 1369 aa14.06□□□□□ -0.16
TCF4-202ENST00000356073 HIRIP3Q9BW71 556 aaPredicted RBP14.05□□□□□ -0.16
TCF4-202ENST00000356073 VPS37DQ86XT2 251 aa14.05□□□□□ -0.16
TCF4-202ENST00000356073 TEX35Q5T0J7 233 aa14.05□□□□□ -0.16
TCF4-202ENST00000356073 TAF3Q5VWG9 929 aa14.04□□□□□ -0.16
TCF4-202ENST00000356073 CROCCQ5TZA2 2017 aa14.03□□□□□ -0.16
TCF4-202ENST00000356073 PAXIP1Q6ZW49 1069 aaPredicted RBP14.03□□□□□ -0.16
TCF4-202ENST00000356073 PCMTD1Q96MG8 357 aaPredicted RBP14.03□□□□□ -0.16
TCF4-202ENST00000356073 IBSPP21815 317 aaPredicted RBP14.02□□□□□ -0.16
TCF4-202ENST00000356073 SF3A1Q15459 793 aaKnown RBP14.02□□□□□ -0.17
TCF4-202ENST00000356073 MAP3K9P80192 1104 aa14.02□□□□□ -0.17
TCF4-202ENST00000356073 SLC4A3P48751 1232 aa14.01□□□□□ -0.17
TCF4-202ENST00000356073 TMEM87AQ8NBN3 555 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms