RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 RRAGDQ9NQL2 400 aaPredicted RBP10.12□□□□□ -0.79
CCR9-201ENST00000355983 SPATA31E1Q6ZUB1 1445 aa10.12□□□□□ -0.79
CCR9-201ENST00000355983 FYCO1Q9BQS8 1478 aa10.11□□□□□ -0.79
CCR9-201ENST00000355983 FMN1Q68DA7 1419 aa10.11□□□□□ -0.79
CCR9-201ENST00000355983 ARID4BQ4LE39 1312 aaPredicted RBP10.11□□□□□ -0.79
CCR9-201ENST00000355983 GCC2Q8IWJ2 1684 aa10.11□□□□□ -0.79
CCR9-201ENST00000355983 LRPPRCP42704 1394 aaKnown RBP10.11□□□□□ -0.79
CCR9-201ENST00000355983 VIRMAQ69YN4 1812 aaKnown RBP10.11□□□□□ -0.79
CCR9-201ENST00000355983 KTN1Q86UP2 1357 aaKnown RBP10.1□□□□□ -0.79
CCR9-201ENST00000355983 MIA2Q96PC5 1412 aa10.1□□□□□ -0.79
CCR9-201ENST00000355983 PDE3BQ13370 1112 aa10.1□□□□□ -0.79
CCR9-201ENST00000355983 INSRP06213 1382 aa10.1□□□□□ -0.79
CCR9-201ENST00000355983 DHX29Q7Z478 1369 aaKnown RBP10.1□□□□□ -0.79
CCR9-201ENST00000355983 NAIPQ13075 1403 aa10.1□□□□□ -0.79
CCR9-201ENST00000355983 FGD6Q6ZV73 1430 aa10.1□□□□□ -0.79
CCR9-201ENST00000355983 ZMYM4Q5VZL5 1548 aa10.1□□□□□ -0.79
CCR9-201ENST00000355983 CALD1Q05682 793 aaKnown RBP10.1□□□□□ -0.79
CCR9-201ENST00000355983 PNNQ9H307 717 aaKnown RBP10.1□□□□□ -0.79
CCR9-201ENST00000355983 PCF11O94913 1555 aaKnown RBP10.09□□□□□ -0.79
CCR9-201ENST00000355983 RANGAP1P46060 587 aaPredicted RBP10.09□□□□□ -0.79
CCR9-201ENST00000355983 FAM50AQ14320 339 aaKnown RBP10.09□□□□□ -0.79
CCR9-201ENST00000355983 CUX1P39880 1505 aa10.07□□□□□ -0.8
CCR9-201ENST00000355983 FRAT2O75474 233 aaPredicted RBP10.07□□□□□ -0.8
CCR9-201ENST00000355983 TPM2P07951 284 aa10.07□□□□□ -0.8
CCR9-201ENST00000355983 MYOM3Q5VTT5 1437 aa10.06□□□□□ -0.8
CCR9-201ENST00000355983 EXOC6Q8TAG9 804 aa10.06□□□□□ -0.8
CCR9-201ENST00000355983 PDCL3Q9H2J4 239 aa10.06□□□□□ -0.8
CCR9-201ENST00000355983 PNISRQ8TF01 805 aaKnown RBP10.06□□□□□ -0.8
CCR9-201ENST00000355983 EFCAB5A4FU69 1503 aa10.05□□□□□ -0.8
CCR9-201ENST00000355983 CASKIN1Q8WXD9 1431 aa10.05□□□□□ -0.8
CCR9-201ENST00000355983 KIF7Q2M1P5 1343 aa10.05□□□□□ -0.8
CCR9-201ENST00000355983 NAP1L5Q96NT1 182 aaPredicted RBP10.05□□□□□ -0.8
CCR9-201ENST00000355983 FAM161AQ3B820 660 aa10.04□□□□□ -0.8
CCR9-201ENST00000355983 BRD4O60885 1362 aaPredicted RBP10.04□□□□□ -0.8
CCR9-201ENST00000355983 ROCK2O75116 1388 aaKnown RBP10.04□□□□□ -0.8
CCR9-201ENST00000355983 FSD2A1L4K1 749 aa10.04□□□□□ -0.8
CCR9-201ENST00000355983 RCAN3Q9UKA8 241 aa10.04□□□□□ -0.8
CCR9-201ENST00000355983 ISY1Q9ULR0 285 aaKnown RBP10.04□□□□□ -0.8
CCR9-201ENST00000355983 DENND4BO75064 1496 aaPredicted RBP10.04□□□□□ -0.8
CCR9-201ENST00000355983 KDM2BQ8NHM5 1336 aa10.03□□□□□ -0.8
CCR9-201ENST00000355983 PTPRKQ15262 1439 aa10.02□□□□□ -0.81
CCR9-201ENST00000355983 FGD5Q6ZNL6 1462 aa10.02□□□□□ -0.81
CCR9-201ENST00000355983 TEX14Q8IWB6 1497 aa10.02□□□□□ -0.81
CCR9-201ENST00000355983 CCDC144AA2RUR9 1427 aa10.01□□□□□ -0.81
CCR9-201ENST00000355983 PLEKHH2Q8IVE3 1493 aa10.01□□□□□ -0.81
CCR9-201ENST00000355983 ATAD2BQ9ULI0 1458 aa10.01□□□□□ -0.81
CCR9-201ENST00000355983 AAMPQ13685 434 aa10.01□□□□□ -0.81
CCR9-201ENST00000355983 PRDM4Q9UKN5 801 aa10.01□□□□□ -0.81
CCR9-201ENST00000355983 RPRD2Q5VT52 1461 aaKnown RBP10.01□□□□□ -0.81
CCR9-201ENST00000355983 TERF1P54274 439 aa10□□□□□ -0.81
CCR9-201ENST00000355983 CENPQQ7L2Z9 268 aaPredicted RBP10□□□□□ -0.81
CCR9-201ENST00000355983 C8orf34Q49A92 452 aa10□□□□□ -0.81
CCR9-201ENST00000355983 MAP7D2Q96T17 732 aa10□□□□□ -0.81
CCR9-201ENST00000355983 THOC2Q8NI27 1593 aaKnown RBP9.99□□□□□ -0.81
CCR9-201ENST00000355983 FGD1P98174 961 aa9.99□□□□□ -0.81
CCR9-201ENST00000355983 TCOF1Q13428 1488 aaKnown RBP9.98□□□□□ -0.81
CCR9-201ENST00000355983 RBM10P98175 930 aaKnown RBP9.98□□□□□ -0.81
CCR9-201ENST00000355983 GOLGA6L3A6NEY3 463 aa9.98□□□□□ -0.81
CCR9-201ENST00000355983 POGKQ9P215 609 aa9.98□□□□□ -0.81
CCR9-201ENST00000355983 E9PCH4 1651 aa9.97□□□□□ -0.81
CCR9-201ENST00000355983 XRCC6P12956 609 aaKnown RBP eCLIP9.97□□□□□ -0.81
CCR9-201ENST00000355983 KIF15Q9NS87 1388 aa9.97□□□□□ -0.81
CCR9-201ENST00000355983 BCORL1Q5H9F3 1711 aa9.96□□□□□ -0.81
CCR9-201ENST00000355983 SUPT6HQ7KZ85 1726 aaKnown RBP9.96□□□□□ -0.81
CCR9-201ENST00000355983 ARHGEF11O15085 1522 aa9.96□□□□□ -0.81
CCR9-201ENST00000355983 MRE11P49959 708 aa9.96□□□□□ -0.81
CCR9-201ENST00000355983 BECN1Q14457 450 aa9.96□□□□□ -0.81
CCR9-201ENST00000355983 IGF1RP08069 1367 aa9.96□□□□□ -0.82
CCR9-201ENST00000355983 RALBP1Q15311 655 aa9.96□□□□□ -0.82
CCR9-201ENST00000355983 MBD5Q9P267 1494 aa9.95□□□□□ -0.82
CCR9-201ENST00000355983 ZMYM3Q14202 1370 aa9.95□□□□□ -0.82
CCR9-201ENST00000355983 L3MBTL2Q969R5 705 aa9.95□□□□□ -0.82
CCR9-201ENST00000355983 KIF14Q15058 1648 aa9.95□□□□□ -0.82
CCR9-201ENST00000355983 SLC4A3P48751 1232 aa9.95□□□□□ -0.82
CCR9-201ENST00000355983 KDM5CP41229 1560 aa9.95□□□□□ -0.82
CCR9-201ENST00000355983 CTTNBP2Q8WZ74 1663 aa9.94□□□□□ -0.82
CCR9-201ENST00000355983 MYBBP1AQ9BQG0 1328 aaKnown RBP9.94□□□□□ -0.82
CCR9-201ENST00000355983 TMC1Q8TDI8 760 aa9.94□□□□□ -0.82
CCR9-201ENST00000355983 PRDM2Q13029 1718 aa9.94□□□□□ -0.82
CCR9-201ENST00000355983 ESPNB1AK53 854 aa9.94□□□□□ -0.82
CCR9-201ENST00000355983 ANKRD30BQ9BXX2 1392 aa9.94□□□□□ -0.82
CCR9-201ENST00000355983 EHBP1L1Q8N3D4 1523 aa9.93□□□□□ -0.82
CCR9-201ENST00000355983 SMAP1Q8IYB5 467 aaPredicted RBP9.93□□□□□ -0.82
CCR9-201ENST00000355983 ANTXR1Q9H6X2 564 aa9.93□□□□□ -0.82
CCR9-201ENST00000355983 MTERF4Q7Z6M4 381 aaKnown RBP9.93□□□□□ -0.82
CCR9-201ENST00000355983 SCAPERQ9BY12 1400 aa9.93□□□□□ -0.82
CCR9-201ENST00000355983 SNAPC4Q5SXM2 1469 aa9.93□□□□□ -0.82
CCR9-201ENST00000355983 BLMP54132 1417 aaPredicted RBP9.92□□□□□ -0.82
CCR9-201ENST00000355983 UGGT2Q9NYU1 1516 aa9.91□□□□□ -0.82
CCR9-201ENST00000355983 NBPF8Q3BBV2 869 aa9.91□□□□□ -0.82
CCR9-201ENST00000355983 CARMIL1Q5VZK9 1371 aa9.91□□□□□ -0.82
CCR9-201ENST00000355983 CRBNQ96SW2 442 aa9.9□□□□□ -0.82
CCR9-201ENST00000355983 USP19O94966 1318 aa9.9□□□□□ -0.82
CCR9-201ENST00000355983 KIF21AQ7Z4S6 1674 aa9.9□□□□□ -0.83
CCR9-201ENST00000355983 EIF3AQ14152 1382 aaKnown RBP9.9□□□□□ -0.83
CCR9-201ENST00000355983 NCBP3Q53F19 620 aaKnown RBP9.89□□□□□ -0.83
CCR9-201ENST00000355983 GAPVD1Q14C86 1478 aa9.89□□□□□ -0.83
CCR9-201ENST00000355983 NLRP1Q9C000 1473 aa9.89□□□□□ -0.83
CCR9-201ENST00000355983 NCLP19338 710 aaKnown RBP9.89□□□□□ -0.83
CCR9-201ENST00000355983 UTP14CQ5TAP6 766 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms