RNA–Protein interactions for RNA: ENST00000355637.8

RBFOX1-203, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-203ENST00000355637 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.76□□□□□ -0.53
RBFOX1-203ENST00000355637 SIN3AQ96ST3 1273 aa11.74□□□□□ -0.53
RBFOX1-203ENST00000355637 TNNT2P45379 298 aaPredicted RBP11.73□□□□□ -0.53
RBFOX1-203ENST00000355637 FAM13BQ9NYF5 915 aa11.73□□□□□ -0.53
RBFOX1-203ENST00000355637 DNTTIP2Q5QJE6 756 aaKnown RBP11.73□□□□□ -0.53
RBFOX1-203ENST00000355637 KANK4Q5T7N3 995 aaPredicted RBP11.72□□□□□ -0.53
RBFOX1-203ENST00000355637 TMEM51Q9NW97 253 aa11.72□□□□□ -0.53
RBFOX1-203ENST00000355637 PATL2C9JE40 543 aaKnown RBP11.71□□□□□ -0.53
RBFOX1-203ENST00000355637 CERS3Q8IU89 383 aa11.71□□□□□ -0.54
RBFOX1-203ENST00000355637 AEBP1Q8IUX7 1158 aa11.7□□□□□ -0.54
RBFOX1-203ENST00000355637 ANP32CO43423 234 aa11.7□□□□□ -0.54
RBFOX1-203ENST00000355637 FRAT2O75474 233 aaPredicted RBP11.7□□□□□ -0.54
RBFOX1-203ENST00000355637 CLCN1P35523 988 aa11.69□□□□□ -0.54
RBFOX1-203ENST00000355637 KCNG1Q9UIX4 513 aa11.69□□□□□ -0.54
RBFOX1-203ENST00000355637 PPP4R3BQ5MIZ7 849 aa11.68□□□□□ -0.54
RBFOX1-203ENST00000355637 ATP1B4Q9UN42 357 aaPredicted RBP11.68□□□□□ -0.54
RBFOX1-203ENST00000355637 BCCIPQ9P287 314 aaKnown RBP eCLIP11.68□□□□□ -0.54
RBFOX1-203ENST00000355637 APPP05067 770 aa11.68□□□□□ -0.54
RBFOX1-203ENST00000355637 IRX3P78415 501 aaPredicted RBP11.66□□□□□ -0.54
RBFOX1-203ENST00000355637 CENPJQ9HC77 1338 aaPredicted RBP11.66□□□□□ -0.54
RBFOX1-203ENST00000355637 TOP2BQ02880 1626 aa11.66□□□□□ -0.54
RBFOX1-203ENST00000355637 KIF27Q86VH2 1401 aa11.66□□□□□ -0.54
RBFOX1-203ENST00000355637 P3H3Q8IVL6 736 aa11.66□□□□□ -0.54
RBFOX1-203ENST00000355637 ZBTB22O15209 634 aa11.65□□□□□ -0.54
RBFOX1-203ENST00000355637 TPM2P07951 284 aa11.64□□□□□ -0.55
RBFOX1-203ENST00000355637 SMAP1Q8IYB5 467 aaPredicted RBP11.63□□□□□ -0.55
RBFOX1-203ENST00000355637 DHX57Q6P158 1386 aaKnown RBP11.62□□□□□ -0.55
RBFOX1-203ENST00000355637 L1TD1Q5T7N2 865 aaKnown RBP11.62□□□□□ -0.55
RBFOX1-203ENST00000355637 CNKSR2Q8WXI2 1034 aa11.62□□□□□ -0.55
RBFOX1-203ENST00000355637 CFAP44Q96MT7 982 aa11.62□□□□□ -0.55
RBFOX1-203ENST00000355637 HIRIP3Q9BW71 556 aaPredicted RBP11.62□□□□□ -0.55
RBFOX1-203ENST00000355637 ARAP1Q96P48 1450 aa11.62□□□□□ -0.55
RBFOX1-203ENST00000355637 PRXQ9BXM0 1461 aa11.62□□□□□ -0.55
RBFOX1-203ENST00000355637 KIAA1211Q6ZU35 1233 aa11.61□□□□□ -0.55
RBFOX1-203ENST00000355637 POGKQ9P215 609 aa11.61□□□□□ -0.55
RBFOX1-203ENST00000355637 RGS22Q8NE09 1264 aa11.6□□□□□ -0.55
RBFOX1-203ENST00000355637 HSP90B1P14625 803 aaKnown RBP11.59□□□□□ -0.55
RBFOX1-203ENST00000355637 FAM50AQ14320 339 aaKnown RBP11.59□□□□□ -0.55
RBFOX1-203ENST00000355637 RNF216Q9NWF9 866 aaPredicted RBP11.59□□□□□ -0.55
RBFOX1-203ENST00000355637 CUX1P39880 1505 aa11.58□□□□□ -0.56
RBFOX1-203ENST00000355637 ERICH3Q5RHP9 1530 aa11.58□□□□□ -0.56
RBFOX1-203ENST00000355637 MYCNP04198 464 aaPredicted RBP11.58□□□□□ -0.56
RBFOX1-203ENST00000355637 CHRM1P11229 460 aaPredicted RBP11.58□□□□□ -0.56
RBFOX1-203ENST00000355637 TMED8Q6PL24 325 aaPredicted RBP11.58□□□□□ -0.56
RBFOX1-203ENST00000355637 HDAC5Q9UQL6 1122 aa11.58□□□□□ -0.56
RBFOX1-203ENST00000355637 CCNB3Q8WWL7 1395 aa11.57□□□□□ -0.56
RBFOX1-203ENST00000355637 PDE4AP27815 886 aa11.57□□□□□ -0.56
RBFOX1-203ENST00000355637 FAM193AP78312 1265 aa11.57□□□□□ -0.56
RBFOX1-203ENST00000355637 CHMP4CQ96CF2 233 aa11.57□□□□□ -0.56
RBFOX1-203ENST00000355637 TRIM44Q96DX7 344 aaPredicted RBP11.57□□□□□ -0.56
RBFOX1-203ENST00000355637 NCAPD3P42695 1498 aa11.56□□□□□ -0.56
RBFOX1-203ENST00000355637 ZBTB9Q96C00 473 aa11.56□□□□□ -0.56
RBFOX1-203ENST00000355637 PANK2Q9BZ23 570 aa11.56□□□□□ -0.56
RBFOX1-203ENST00000355637 CGNQ9P2M7 1197 aaKnown RBP11.56□□□□□ -0.56
RBFOX1-203ENST00000355637 SOX12O15370 315 aa11.56□□□□□ -0.56
RBFOX1-203ENST00000355637 GZF1Q9H116 711 aaPredicted RBP11.56□□□□□ -0.56
RBFOX1-203ENST00000355637 CUX2O14529 1486 aa11.55□□□□□ -0.56
RBFOX1-203ENST00000355637 BIVM-ERCC5R4GMW8 1640 aa11.55□□□□□ -0.56
RBFOX1-203ENST00000355637 ESPNB1AK53 854 aa11.55□□□□□ -0.56
RBFOX1-203ENST00000355637 CCER2I3L3R5 266 aa11.53□□□□□ -0.56
RBFOX1-203ENST00000355637 DMTNQ08495 405 aa11.53□□□□□ -0.56
RBFOX1-203ENST00000355637 MAP7D2Q96T17 732 aa11.53□□□□□ -0.56
RBFOX1-203ENST00000355637 ARHGAP35Q9NRY4 1499 aa11.52□□□□□ -0.57
RBFOX1-203ENST00000355637 GOLGA6L3A6NEY3 463 aa11.52□□□□□ -0.57
RBFOX1-203ENST00000355637 CFTRP13569 1480 aa11.51□□□□□ -0.57
RBFOX1-203ENST00000355637 XRCC6P12956 609 aaKnown RBP eCLIP11.51□□□□□ -0.57
RBFOX1-203ENST00000355637 TMC1Q8TDI8 760 aa11.51□□□□□ -0.57
RBFOX1-203ENST00000355637 HMGXB3Q12766 1538 aa11.51□□□□□ -0.57
RBFOX1-203ENST00000355637 RRBP1Q9P2E9 1410 aaKnown RBP11.5□□□□□ -0.57
RBFOX1-203ENST00000355637 CARMIL1Q5VZK9 1371 aa11.5□□□□□ -0.57
RBFOX1-203ENST00000355637 IGF1RP08069 1367 aa11.49□□□□□ -0.57
RBFOX1-203ENST00000355637 RAB3GAP2Q9H2M9 1393 aa11.49□□□□□ -0.57
RBFOX1-203ENST00000355637 NGEFQ8N5V2 710 aa11.49□□□□□ -0.57
RBFOX1-203ENST00000355637 SLC52A1Q9NWF4 448 aa11.49□□□□□ -0.57
RBFOX1-203ENST00000355637 MYH16Q9H6N6 1097 aa11.48□□□□□ -0.57
RBFOX1-203ENST00000355637 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.48□□□□□ -0.57
RBFOX1-203ENST00000355637 IGSF3O75054 1194 aa11.48□□□□□ -0.57
RBFOX1-203ENST00000355637 UTP14CQ5TAP6 766 aaKnown RBP11.47□□□□□ -0.57
RBFOX1-203ENST00000355637 R3HCC1Q9Y3T6 440 aaKnown RBP11.47□□□□□ -0.57
RBFOX1-203ENST00000355637 FAM9BQ8IZU0 186 aa11.47□□□□□ -0.57
RBFOX1-203ENST00000355637 FAM43BQ6ZT52 329 aaPredicted RBP11.46□□□□□ -0.57
RBFOX1-203ENST00000355637 CCDC9Q9Y3X0 531 aaKnown RBP11.46□□□□□ -0.57
RBFOX1-203ENST00000355637 CLGNO14967 610 aa11.46□□□□□ -0.58
RBFOX1-203ENST00000355637 RIPK4P57078 832 aa11.46□□□□□ -0.58
RBFOX1-203ENST00000355637 CBX1P83916 185 aa11.46□□□□□ -0.58
RBFOX1-203ENST00000355637 TAOK2Q9UL54 1235 aa11.46□□□□□ -0.58
RBFOX1-203ENST00000355637 SENP3-EIF4A1A0A087X0R7 540 aa11.45□□□□□ -0.58
RBFOX1-203ENST00000355637 CADPSQ9ULU8 1353 aa11.45□□□□□ -0.58
RBFOX1-203ENST00000355637 ZSCAN20P17040 1043 aaPredicted RBP11.45□□□□□ -0.58
RBFOX1-203ENST00000355637 BACH2Q9BYV9 841 aa11.45□□□□□ -0.58
RBFOX1-203ENST00000355637 KIF20AO95235 890 aa11.44□□□□□ -0.58
RBFOX1-203ENST00000355637 ERBB4Q15303 1308 aa11.44□□□□□ -0.58
RBFOX1-203ENST00000355637 TPRNQ4KMQ1 711 aa11.44□□□□□ -0.58
RBFOX1-203ENST00000355637 TCERG1O14776 1098 aaKnown RBP11.43□□□□□ -0.58
RBFOX1-203ENST00000355637 KCNJ4P48050 445 aa11.43□□□□□ -0.58
RBFOX1-203ENST00000355637 FGD5Q6ZNL6 1462 aa11.43□□□□□ -0.58
RBFOX1-203ENST00000355637 SETD5Q9C0A6 1442 aa11.42□□□□□ -0.58
RBFOX1-203ENST00000355637 PTMAP06454 111 aaKnown RBP11.42□□□□□ -0.58
RBFOX1-203ENST00000355637 ZNF526Q8TF50 670 aaPredicted RBP11.42□□□□□ -0.58
RBFOX1-203ENST00000355637 PHLDB1Q86UU1 1377 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms