RNA–Protein interactions for RNA: ENST00000355547.9

PDZD3-202, Transcript of PDZ domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD3, Length 2,252 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-202ENST00000355547 EIF4G2P78344 907 aaKnown RBP eCLIP25.22■■□□□ 1.63
PDZD3-202ENST00000355547 CHD1O14646 1710 aa25.21■■□□□ 1.63
PDZD3-202ENST00000355547 L3MBTL2Q969R5 705 aa25.19■■□□□ 1.62
PDZD3-202ENST00000355547 DAPK1P53355 1430 aa25.18■■□□□ 1.62
PDZD3-202ENST00000355547 ANKRD30BQ9BXX2 1392 aa25.17■■□□□ 1.62
PDZD3-202ENST00000355547 CNTLNQ9NXG0 1405 aa25.15■■□□□ 1.62
PDZD3-202ENST00000355547 KIAA0586Q9BVV6 1533 aa25.15■■□□□ 1.62
PDZD3-202ENST00000355547 RPRD2Q5VT52 1461 aaKnown RBP25.14■■□□□ 1.62
PDZD3-202ENST00000355547 ABCC5O15440 1437 aa25.14■■□□□ 1.62
PDZD3-202ENST00000355547 DNMT1P26358 1616 aaKnown RBP25.14■■□□□ 1.61
PDZD3-202ENST00000355547 NCOA1Q15788 1441 aa25.13■■□□□ 1.61
PDZD3-202ENST00000355547 BCL11AQ9H165 835 aa25.13■■□□□ 1.61
PDZD3-202ENST00000355547 DISP1Q96F81 1524 aa25.13■■□□□ 1.61
PDZD3-202ENST00000355547 HNRNPUQ00839 825 aaKnown RBP eCLIP25.12■■□□□ 1.61
PDZD3-202ENST00000355547 KIAA0556O60303 1618 aa25.11■■□□□ 1.61
PDZD3-202ENST00000355547 CEP170Q5SW79 1584 aa25.11■■□□□ 1.61
PDZD3-202ENST00000355547 NUP153P49790 1475 aaKnown RBP25.1■■□□□ 1.61
PDZD3-202ENST00000355547 CCDC7Q96M83 1385 aa25.09■■□□□ 1.61
PDZD3-202ENST00000355547 TEX14Q8IWB6 1497 aa25.09■■□□□ 1.61
PDZD3-202ENST00000355547 FOXD1Q16676 465 aa25.09■■□□□ 1.61
PDZD3-202ENST00000355547 ARID3CA6NKF2 412 aa25.08■■□□□ 1.61
PDZD3-202ENST00000355547 C11orf95C9JLR9 678 aaPredicted RBP25.06■■□□□ 1.6
PDZD3-202ENST00000355547 NUP160Q12769 1436 aa25.05■■□□□ 1.6
PDZD3-202ENST00000355547 RAPGEF6Q8TEU7 1601 aa25.05■■□□□ 1.6
PDZD3-202ENST00000355547 NBPF8Q3BBV2 869 aa25.05■■□□□ 1.6
PDZD3-202ENST00000355547 SPATA31E1Q6ZUB1 1445 aa25.04■■□□□ 1.6
PDZD3-202ENST00000355547 RBM19Q9Y4C8 960 aaKnown RBP25.04■■□□□ 1.6
PDZD3-202ENST00000355547 ZNF644Q9H582 1327 aaPredicted RBP25.03■■□□□ 1.6
PDZD3-202ENST00000355547 CDK11AQ9UQ88 783 aaPredicted RBP25.03■■□□□ 1.6
PDZD3-202ENST00000355547 PRKRIP1Q9H875 184 aaPredicted RBP25.02■■□□□ 1.6
PDZD3-202ENST00000355547 SLC4A1APQ9BWU0 796 aaKnown RBP24.99■■□□□ 1.59
PDZD3-202ENST00000355547 CCDC184Q52MB2 194 aa24.98■■□□□ 1.59
PDZD3-202ENST00000355547 ERICH6BQ5W0A0 696 aa24.98■■□□□ 1.59
PDZD3-202ENST00000355547 TROQ12816 1431 aaPredicted RBP24.97■■□□□ 1.59
PDZD3-202ENST00000355547 PZPP20742 1482 aa24.96■■□□□ 1.59
PDZD3-202ENST00000355547 OSCARQ8IYS5 282 aa24.96■■□□□ 1.59
PDZD3-202ENST00000355547 POLR1AO95602 1720 aaPredicted RBP24.94■■□□□ 1.58
PDZD3-202ENST00000355547 KIF7Q2M1P5 1343 aa24.93■■□□□ 1.58
PDZD3-202ENST00000355547 CAMSAP2Q08AD1 1489 aa24.92■■□□□ 1.58
PDZD3-202ENST00000355547 PRG4Q92954 1404 aaPredicted RBP24.92■■□□□ 1.58
PDZD3-202ENST00000355547 ADGRL2O95490 1459 aa24.91■■□□□ 1.58
PDZD3-202ENST00000355547 JPH4Q96JJ6 628 aa24.91■■□□□ 1.58
PDZD3-202ENST00000355547 GPATCH8Q9UKJ3 1502 aaKnown RBP24.9■■□□□ 1.58
PDZD3-202ENST00000355547 MBD5Q9P267 1494 aa24.9■■□□□ 1.58
PDZD3-202ENST00000355547 ITSN2Q9NZM3 1697 aa24.89■■□□□ 1.58
PDZD3-202ENST00000355547 CFDP1Q9UEE9 299 aaPredicted RBP24.89■■□□□ 1.57
PDZD3-202ENST00000355547 ADGBQ8N7X0 1667 aa24.88■■□□□ 1.57
PDZD3-202ENST00000355547 MRS2Q9HD23 443 aa24.88■■□□□ 1.57
PDZD3-202ENST00000355547 ZBED9Q6R2W3 1325 aa24.88■■□□□ 1.57
PDZD3-202ENST00000355547 CLASP1Q7Z460 1538 aa24.88■■□□□ 1.57
PDZD3-202ENST00000355547 ADCY10Q96PN6 1610 aa24.88■■□□□ 1.57
PDZD3-202ENST00000355547 KIAA1107Q9UPP5 1409 aa24.87■■□□□ 1.57
PDZD3-202ENST00000355547 IRX6P78412 446 aaPredicted RBP24.84■■□□□ 1.57
PDZD3-202ENST00000355547 FAM9BQ8IZU0 186 aa24.83■■□□□ 1.57
PDZD3-202ENST00000355547 PLB1Q6P1J6 1458 aa24.83■■□□□ 1.57
PDZD3-202ENST00000355547 CROCC2H7BZ55 1655 aa24.82■■□□□ 1.56
PDZD3-202ENST00000355547 PPP4R2Q9NY27 417 aa24.82■■□□□ 1.56
PDZD3-202ENST00000355547 KIF14Q15058 1648 aa24.81■■□□□ 1.56
PDZD3-202ENST00000355547 ANKRD30AQ9BXX3 1397 aa24.8■■□□□ 1.56
PDZD3-202ENST00000355547 DHX29Q7Z478 1369 aaKnown RBP24.79■■□□□ 1.56
PDZD3-202ENST00000355547 ARID4BQ4LE39 1312 aaPredicted RBP24.78■■□□□ 1.56
PDZD3-202ENST00000355547 SHROOM2Q13796 1616 aa24.76■■□□□ 1.55
PDZD3-202ENST00000355547 ERCC6L2Q5T890 1561 aa24.76■■□□□ 1.55
PDZD3-202ENST00000355547 PKD2Q13563 968 aa24.75■■□□□ 1.55
PDZD3-202ENST00000355547 USP47Q96K76 1375 aa24.75■■□□□ 1.55
PDZD3-202ENST00000355547 CARMIL2Q6F5E8 1435 aa24.75■■□□□ 1.55
PDZD3-202ENST00000355547 FANCIQ9NVI1 1328 aa24.75■■□□□ 1.55
PDZD3-202ENST00000355547 UHRF1BP1Q6BDS2 1440 aa24.74■■□□□ 1.55
PDZD3-202ENST00000355547 ANKRD50Q9ULJ7 1429 aa24.74■■□□□ 1.55
PDZD3-202ENST00000355547 BCORL1Q5H9F3 1711 aa24.73■■□□□ 1.55
PDZD3-202ENST00000355547 ZNF777Q9ULD5 760 aaPredicted RBP24.72■■□□□ 1.55
PDZD3-202ENST00000355547 SHANK2Q9UPX8 1470 aa24.72■■□□□ 1.55
PDZD3-202ENST00000355547 KDM5CP41229 1560 aa24.71■■□□□ 1.55
PDZD3-202ENST00000355547 ABCC10Q5T3U5 1492 aa24.69■■□□□ 1.54
PDZD3-202ENST00000355547 MSH5O43196 834 aa24.68■■□□□ 1.54
PDZD3-202ENST00000355547 RALGAPBQ86X10 1494 aa24.67■■□□□ 1.54
PDZD3-202ENST00000355547 ABCA8O94911 1581 aa24.67■■□□□ 1.54
PDZD3-202ENST00000355547 SMG6Q86US8 1419 aaKnown RBP24.67■■□□□ 1.54
PDZD3-202ENST00000355547 KDM5DQ9BY66 1539 aa24.67■■□□□ 1.54
PDZD3-202ENST00000355547 ARHGEF12Q9NZN5 1544 aa24.66■■□□□ 1.54
PDZD3-202ENST00000355547 CDC42BPAQ5VT25 1732 aa24.65■■□□□ 1.54
PDZD3-202ENST00000355547 ROCK2O75116 1388 aaKnown RBP24.65■■□□□ 1.54
PDZD3-202ENST00000355547 PLEKHD1A6NEE1 506 aa24.65■■□□□ 1.54
PDZD3-202ENST00000355547 C9orf84Q5VXU9 1444 aa24.65■■□□□ 1.54
PDZD3-202ENST00000355547 NUP155O75694 1391 aa24.63■■□□□ 1.53
PDZD3-202ENST00000355547 ATP10BO94823 1461 aa24.63■■□□□ 1.53
PDZD3-202ENST00000355547 ZNF326Q5BKZ1 582 aaKnown RBP24.61■■□□□ 1.53
PDZD3-202ENST00000355547 PTPRGP23470 1445 aa24.6■■□□□ 1.53
PDZD3-202ENST00000355547 RNF123Q5XPI4 1314 aa24.59■■□□□ 1.53
PDZD3-202ENST00000355547 B4GALNT3Q6L9W6 998 aa24.57■■□□□ 1.52
PDZD3-202ENST00000355547 NUDCQ9Y266 331 aa24.56■■□□□ 1.52
PDZD3-202ENST00000355547 ARHGEF5Q12774 1597 aa24.56■■□□□ 1.52
PDZD3-202ENST00000355547 TSPY4P0CV99 314 aa24.55■■□□□ 1.52
PDZD3-202ENST00000355547 TSPY10P0CW01 314 aa24.55■■□□□ 1.52
PDZD3-202ENST00000355547 PNISRQ8TF01 805 aaKnown RBP24.55■■□□□ 1.52
PDZD3-202ENST00000355547 CARD11Q9BXL7 1154 aa24.55■■□□□ 1.52
PDZD3-202ENST00000355547 POLR3GLQ9BT43 218 aa24.52■■□□□ 1.52
PDZD3-202ENST00000355547 KIF15Q9NS87 1388 aa24.52■■□□□ 1.52
PDZD3-202ENST00000355547 KTN1Q86UP2 1357 aaKnown RBP24.51■■□□□ 1.51
PDZD3-202ENST00000355547 LRPPRCP42704 1394 aaKnown RBP24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms