RNA–Protein interactions for RNA: ENST00000354749.6

TTC3-201, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 9,084 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-201ENST00000354749 KANK1Q14678 1352 aa8.26□□□□□ -1.09
TTC3-201ENST00000354749 NACADO15069 1562 aa8.26□□□□□ -1.09
TTC3-201ENST00000354749 KCNH8Q96L42 1107 aa8.26□□□□□ -1.09
TTC3-201ENST00000354749 RCAN3Q9UKA8 241 aa8.26□□□□□ -1.09
TTC3-201ENST00000354749 U2SURPO15042 1029 aaKnown RBP8.25□□□□□ -1.09
TTC3-201ENST00000354749 HSPA5P11021 654 aaKnown RBP8.25□□□□□ -1.09
TTC3-201ENST00000354749 USP35Q9P2H5 1018 aa8.25□□□□□ -1.09
TTC3-201ENST00000354749 SPRYD3Q8NCJ5 442 aa8.24□□□□□ -1.09
TTC3-201ENST00000354749 DCAF11Q8TEB1 546 aa8.24□□□□□ -1.09
TTC3-201ENST00000354749 MORC1Q86VD1 984 aa8.23□□□□□ -1.09
TTC3-201ENST00000354749 HTATSF1O43719 755 aaKnown RBP8.23□□□□□ -1.09
TTC3-201ENST00000354749 SLKQ9H2G2 1235 aaPredicted RBP8.23□□□□□ -1.09
TTC3-201ENST00000354749 EIF3AQ14152 1382 aaKnown RBP8.23□□□□□ -1.09
TTC3-201ENST00000354749 CALD1Q05682 793 aaKnown RBP8.22□□□□□ -1.09
TTC3-201ENST00000354749 NAP1L2Q9ULW6 460 aaPredicted RBP8.22□□□□□ -1.09
TTC3-201ENST00000354749 ROCK2O75116 1388 aaKnown RBP8.22□□□□□ -1.09
TTC3-201ENST00000354749 RSPH6AQ9H0K4 717 aa8.22□□□□□ -1.09
TTC3-201ENST00000354749 KIAA1211Q6ZU35 1233 aa8.21□□□□□ -1.09
TTC3-201ENST00000354749 SENP3Q9H4L4 574 aaPredicted RBP8.21□□□□□ -1.09
TTC3-201ENST00000354749 GZF1Q9H116 711 aaPredicted RBP8.21□□□□□ -1.1
TTC3-201ENST00000354749 PDE3BQ13370 1112 aa8.2□□□□□ -1.1
TTC3-201ENST00000354749 RAB3GAP2Q9H2M9 1393 aa8.2□□□□□ -1.1
TTC3-201ENST00000354749 PHLDB1Q86UU1 1377 aa8.2□□□□□ -1.1
TTC3-201ENST00000354749 ITPRIPQ8IWB1 547 aa8.2□□□□□ -1.1
TTC3-201ENST00000354749 PMFBP1Q8TBY8 1022 aa8.2□□□□□ -1.1
TTC3-201ENST00000354749 SOGA1O94964 1423 aa8.2□□□□□ -1.1
TTC3-201ENST00000354749 GNL2Q13823 731 aaKnown RBP8.2□□□□□ -1.1
TTC3-201ENST00000354749 DDX11L8A8MPP1 907 aa8.19□□□□□ -1.1
TTC3-201ENST00000354749 PLEKHG5O94827 1062 aa8.19□□□□□ -1.1
TTC3-201ENST00000354749 CARMIL1Q5VZK9 1371 aa8.19□□□□□ -1.1
TTC3-201ENST00000354749 FMN1Q68DA7 1419 aa8.19□□□□□ -1.1
TTC3-201ENST00000354749 EIF4G1Q04637 1599 aaKnown RBP8.19□□□□□ -1.1
TTC3-201ENST00000354749 PHF14O94880 888 aa8.19□□□□□ -1.1
TTC3-201ENST00000354749 GOLGA2Q08379 1002 aa8.19□□□□□ -1.1
TTC3-201ENST00000354749 CUX2O14529 1486 aa8.18□□□□□ -1.1
TTC3-201ENST00000354749 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.18□□□□□ -1.1
TTC3-201ENST00000354749 TNNT3P45378 269 aaPredicted RBP8.18□□□□□ -1.1
TTC3-201ENST00000354749 CSPP1Q1MSJ5 1256 aa8.17□□□□□ -1.1
TTC3-201ENST00000354749 TAOK2Q9UL54 1235 aa8.17□□□□□ -1.1
TTC3-201ENST00000354749 TPM4P67936 248 aa8.17□□□□□ -1.1
TTC3-201ENST00000354749 NLRP13Q86W25 1043 aa8.17□□□□□ -1.1
TTC3-201ENST00000354749 MFAP1P55081 439 aaKnown RBP8.16□□□□□ -1.1
TTC3-201ENST00000354749 PKD2Q13563 968 aa8.16□□□□□ -1.1
TTC3-201ENST00000354749 CCDC34Q96HJ3 373 aa8.16□□□□□ -1.1
TTC3-201ENST00000354749 CHMP4AQ9BY43 222 aa8.16□□□□□ -1.1
TTC3-201ENST00000354749 SRPK2P78362 688 aaKnown RBP8.16□□□□□ -1.1
TTC3-201ENST00000354749 HSP90AA2PQ14568 343 aaPredicted RBP8.16□□□□□ -1.1
TTC3-201ENST00000354749 HMMRO75330 724 aa8.16□□□□□ -1.1
TTC3-201ENST00000354749 GOLGA6L1Q8N7Z2 621 aa8.15□□□□□ -1.1
TTC3-201ENST00000354749 RTF1Q92541 710 aaKnown RBP8.15□□□□□ -1.1
TTC3-201ENST00000354749 CENPJQ9HC77 1338 aaPredicted RBP8.15□□□□□ -1.1
TTC3-201ENST00000354749 ARID3AQ99856 593 aa8.15□□□□□ -1.11
TTC3-201ENST00000354749 TULP1O00294 542 aaPredicted RBP8.15□□□□□ -1.11
TTC3-201ENST00000354749 HDGFL2Q7Z4V5 671 aaPredicted RBP8.15□□□□□ -1.11
TTC3-201ENST00000354749 U2AF1L5P0DN76 240 aaPredicted RBP8.14□□□□□ -1.11
TTC3-201ENST00000354749 U2AF1Q01081 240 aaKnown RBP eCLIP8.14□□□□□ -1.11
TTC3-201ENST00000354749 FANCIQ9NVI1 1328 aa8.14□□□□□ -1.11
TTC3-201ENST00000354749 AMER1Q5JTC6 1135 aaPredicted RBP8.14□□□□□ -1.11
TTC3-201ENST00000354749 GPATCH3Q96I76 525 aa8.14□□□□□ -1.11
TTC3-201ENST00000354749 ANKRD30AQ9BXX3 1397 aa8.14□□□□□ -1.11
TTC3-201ENST00000354749 KIF15Q9NS87 1388 aa8.14□□□□□ -1.11
TTC3-201ENST00000354749 NOC3LQ8WTT2 800 aaKnown RBP8.14□□□□□ -1.11
TTC3-201ENST00000354749 APBB1O00213 710 aa8.14□□□□□ -1.11
TTC3-201ENST00000354749 ST18O60284 1047 aa8.14□□□□□ -1.11
TTC3-201ENST00000354749 GSE1Q14687 1217 aa8.14□□□□□ -1.11
TTC3-201ENST00000354749 SKOR2Q2VWA4 1001 aaPredicted RBP8.13□□□□□ -1.11
TTC3-201ENST00000354749 HDAC5Q9UQL6 1122 aa8.13□□□□□ -1.11
TTC3-201ENST00000354749 NPHP1O15259 732 aa8.13□□□□□ -1.11
TTC3-201ENST00000354749 HDGFP51858 240 aaKnown RBP8.13□□□□□ -1.11
TTC3-201ENST00000354749 ZBED9Q6R2W3 1325 aa8.13□□□□□ -1.11
TTC3-201ENST00000354749 CENPQQ7L2Z9 268 aaPredicted RBP8.13□□□□□ -1.11
TTC3-201ENST00000354749 SMC4Q9NTJ3 1288 aa8.13□□□□□ -1.11
TTC3-201ENST00000354749 NUP155O75694 1391 aa8.12□□□□□ -1.11
TTC3-201ENST00000354749 LMOD2Q6P5Q4 547 aa8.12□□□□□ -1.11
TTC3-201ENST00000354749 KANK4Q5T7N3 995 aaPredicted RBP8.12□□□□□ -1.11
TTC3-201ENST00000354749 FAM161AQ3B820 660 aa8.12□□□□□ -1.11
TTC3-201ENST00000354749 MPHOSPH9Q99550 1183 aa8.12□□□□□ -1.11
TTC3-201ENST00000354749 STK31Q9BXU1 1019 aa8.12□□□□□ -1.11
TTC3-201ENST00000354749 MYBBP1AQ9BQG0 1328 aaKnown RBP8.12□□□□□ -1.11
TTC3-201ENST00000354749 SPAG9O60271 1321 aaKnown RBP8.11□□□□□ -1.11
TTC3-201ENST00000354749 ABCC8Q09428 1581 aa8.11□□□□□ -1.11
TTC3-201ENST00000354749 CLSTN1O94985 981 aa8.11□□□□□ -1.11
TTC3-201ENST00000354749 KIF3AQ9Y496 699 aa8.11□□□□□ -1.11
TTC3-201ENST00000354749 ATP6V1DQ9Y5K8 247 aa8.11□□□□□ -1.11
TTC3-201ENST00000354749 PDE4AP27815 886 aa8.1□□□□□ -1.11
TTC3-201ENST00000354749 LMOD3Q0VAK6 560 aa8.1□□□□□ -1.11
TTC3-201ENST00000354749 KIF16BQ96L93 1317 aa8.1□□□□□ -1.11
TTC3-201ENST00000354749 CCDC88BA6NC98 1476 aa8.09□□□□□ -1.11
TTC3-201ENST00000354749 CGNL1Q0VF96 1302 aa8.09□□□□□ -1.11
TTC3-201ENST00000354749 CECR2Q9BXF3 1484 aa8.09□□□□□ -1.11
TTC3-201ENST00000354749 HSP90B1P14625 803 aaKnown RBP8.09□□□□□ -1.11
TTC3-201ENST00000354749 FOXD1Q16676 465 aa8.09□□□□□ -1.11
TTC3-201ENST00000354749 ERCC6Q03468 1493 aa8.09□□□□□ -1.11
TTC3-201ENST00000354749 CARMIL2Q6F5E8 1435 aa8.09□□□□□ -1.12
TTC3-201ENST00000354749 TERF2IPQ9NYB0 399 aa8.08□□□□□ -1.12
TTC3-201ENST00000354749 TPM3P06753 285 aa8.08□□□□□ -1.12
TTC3-201ENST00000354749 CCDC18Q5T9S5 1454 aa8.08□□□□□ -1.12
TTC3-201ENST00000354749 TRIM6-TRIM34B2RNG4 842 aa8.08□□□□□ -1.12
TTC3-201ENST00000354749 RRP1P56182 461 aaKnown RBP8.08□□□□□ -1.12
TTC3-201ENST00000354749 L3MBTL2Q969R5 705 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms