RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 CDC42BPBQ9Y5S2 1711 aa30.61■■■□□ 2.49
TRIM4-202ENST00000354241 DNMT1P26358 1616 aaKnown RBP30.61■■■□□ 2.49
TRIM4-202ENST00000354241 WDR7Q9Y4E6 1490 aa30.61■■■□□ 2.49
TRIM4-202ENST00000354241 RAB3GAP2Q9H2M9 1393 aa30.6■■■□□ 2.49
TRIM4-202ENST00000354241 NPM1P06748 294 aaKnown RBP eCLIP30.6■■■□□ 2.49
TRIM4-202ENST00000354241 MYO5CQ9NQX4 1742 aa30.6■■■□□ 2.49
TRIM4-202ENST00000354241 DAPK1P53355 1430 aa30.57■■■□□ 2.48
TRIM4-202ENST00000354241 ASXL2Q76L83 1435 aa30.55■■■□□ 2.48
TRIM4-202ENST00000354241 CHIC2Q9UKJ5 165 aa30.54■■■□□ 2.48
TRIM4-202ENST00000354241 ABCC5O15440 1437 aa30.53■■■□□ 2.48
TRIM4-202ENST00000354241 ARHGAP5Q13017 1502 aa30.52■■■□□ 2.48
TRIM4-202ENST00000354241 HFM1A2PYH4 1435 aa30.52■■■□□ 2.48
TRIM4-202ENST00000354241 CYB5RLQ6IPT4 315 aa30.51■■■□□ 2.48
TRIM4-202ENST00000354241 SAMD9LQ8IVG5 1584 aa30.49■■■□□ 2.47
TRIM4-202ENST00000354241 CROCC2H7BZ55 1655 aa30.48■■■□□ 2.47
TRIM4-202ENST00000354241 DHX57Q6P158 1386 aaKnown RBP30.47■■■□□ 2.47
TRIM4-202ENST00000354241 NAIPQ13075 1403 aa30.47■■■□□ 2.47
TRIM4-202ENST00000354241 GCC2Q8IWJ2 1684 aa30.46■■■□□ 2.47
TRIM4-202ENST00000354241 RRP7BPQ9NSQ0 103 aa30.45■■■□□ 2.47
TRIM4-202ENST00000354241 PLCH2O75038 1416 aa30.44■■■□□ 2.46
TRIM4-202ENST00000354241 AKNAQ7Z591 1439 aa30.44■■■□□ 2.46
TRIM4-202ENST00000354241 ABCA9Q8IUA7 1624 aa30.42■■■□□ 2.46
TRIM4-202ENST00000354241 ADGBQ8N7X0 1667 aa30.42■■■□□ 2.46
TRIM4-202ENST00000354241 ROCK1Q13464 1354 aa30.4■■■□□ 2.46
TRIM4-202ENST00000354241 ARHGEF5Q12774 1597 aa30.39■■■□□ 2.46
TRIM4-202ENST00000354241 HNRNPMP52272 730 aaKnown RBP eCLIP30.39■■■□□ 2.46
TRIM4-202ENST00000354241 SYCP2Q9BX26 1530 aa30.36■■■□□ 2.45
TRIM4-202ENST00000354241 MBD5Q9P267 1494 aa30.36■■■□□ 2.45
TRIM4-202ENST00000354241 EFCAB2Q5VUJ9 269 aa30.35■■■□□ 2.45
TRIM4-202ENST00000354241 ARAP3Q8WWN8 1544 aa30.35■■■□□ 2.45
TRIM4-202ENST00000354241 PLEKHH2Q8IVE3 1493 aa30.34■■■□□ 2.45
TRIM4-202ENST00000354241 SHANK2Q9UPX8 1470 aa30.33■■■□□ 2.45
TRIM4-202ENST00000354241 CCDC141Q6ZP82 1450 aa30.32■■■□□ 2.44
TRIM4-202ENST00000354241 ADGRL2O95490 1459 aa30.31■■■□□ 2.44
TRIM4-202ENST00000354241 MAPKBP1O60336 1514 aa30.31■■■□□ 2.44
TRIM4-202ENST00000354241 KDM6BO15054 1643 aa30.3■■■□□ 2.44
TRIM4-202ENST00000354241 C9orf84Q5VXU9 1444 aa30.3■■■□□ 2.44
TRIM4-202ENST00000354241 TSPY4P0CV99 314 aa30.29■■■□□ 2.44
TRIM4-202ENST00000354241 TSPY10P0CW01 314 aa30.29■■■□□ 2.44
TRIM4-202ENST00000354241 KIAA1107Q9UPP5 1409 aa30.29■■■□□ 2.44
TRIM4-202ENST00000354241 CLSPNQ9HAW4 1339 aa30.28■■■□□ 2.44
TRIM4-202ENST00000354241 NCOA1Q15788 1441 aa30.28■■■□□ 2.44
TRIM4-202ENST00000354241 RSPH4AQ5TD94 716 aa30.28■■■□□ 2.44
TRIM4-202ENST00000354241 ANKRD30AQ9BXX3 1397 aa30.27■■■□□ 2.44
TRIM4-202ENST00000354241 ABCC1P33527 1531 aa30.27■■■□□ 2.44
TRIM4-202ENST00000354241 FANCAO15360 1455 aa30.24■■■□□ 2.43
TRIM4-202ENST00000354241 ARHGEF12Q9NZN5 1544 aa30.24■■■□□ 2.43
TRIM4-202ENST00000354241 CD109Q6YHK3 1445 aa30.19■■■□□ 2.42
TRIM4-202ENST00000354241 MAST1Q9Y2H9 1570 aa30.19■■■□□ 2.42
TRIM4-202ENST00000354241 TRIM52Q96A61 297 aa30.16■■■□□ 2.42
TRIM4-202ENST00000354241 TRAPPC8Q9Y2L5 1435 aa30.13■■■□□ 2.41
TRIM4-202ENST00000354241 CFAP74Q9C0B2 1584 aa30.12■■■□□ 2.41
TRIM4-202ENST00000354241 ADGRL1O94910 1474 aa30.12■■■□□ 2.41
TRIM4-202ENST00000354241 KIF15Q9NS87 1388 aa30.12■■■□□ 2.41
TRIM4-202ENST00000354241 ANKRD50Q9ULJ7 1429 aa30.11■■■□□ 2.41
TRIM4-202ENST00000354241 ACIN1Q9UKV3 1341 aaKnown RBP30.1■■■□□ 2.41
TRIM4-202ENST00000354241 GLI2P10070 1586 aa30.08■■■□□ 2.41
TRIM4-202ENST00000354241 PLXNC1O60486 1568 aa30.07■■■□□ 2.4
TRIM4-202ENST00000354241 MAP3K4Q9Y6R4 1608 aa30.07■■■□□ 2.4
TRIM4-202ENST00000354241 SCAPERQ9BY12 1400 aa30.07■■■□□ 2.4
TRIM4-202ENST00000354241 DIP2BQ9P265 1576 aa30.05■■■□□ 2.4
TRIM4-202ENST00000354241 AFAP1Q8N556 730 aa30.03■■■□□ 2.4
TRIM4-202ENST00000354241 SPAG9O60271 1321 aaKnown RBP30.01■■■□□ 2.4
TRIM4-202ENST00000354241 FAM69CQ0P6D2 419 aa29.99■■■□□ 2.39
TRIM4-202ENST00000354241 MPHOSPH9Q99550 1183 aa29.99■■■□□ 2.39
TRIM4-202ENST00000354241 ZFYVE16Q7Z3T8 1539 aa29.98■■■□□ 2.39
TRIM4-202ENST00000354241 RTEL1-TNFRSF6BF6WH68 1400 aa29.97■■■□□ 2.39
TRIM4-202ENST00000354241 DENND4BO75064 1496 aaPredicted RBP29.97■■■□□ 2.39
TRIM4-202ENST00000354241 NEO1Q92859 1461 aa29.97■■■□□ 2.39
TRIM4-202ENST00000354241 DUOX2Q9NRD8 1548 aa29.96■■■□□ 2.39
TRIM4-202ENST00000354241 SIN3AQ96ST3 1273 aa29.95■■■□□ 2.39
TRIM4-202ENST00000354241 INO80Q9ULG1 1556 aaPredicted RBP29.95■■■□□ 2.39
TRIM4-202ENST00000354241 ATP7AQ04656 1500 aa29.94■■■□□ 2.38
TRIM4-202ENST00000354241 PZPP20742 1482 aa29.93■■■□□ 2.38
TRIM4-202ENST00000354241 ZNF518AQ6AHZ1 1483 aa29.93■■■□□ 2.38
TRIM4-202ENST00000354241 NEUROD1Q13562 356 aa29.92■■■□□ 2.38
TRIM4-202ENST00000354241 SLC4A1APQ9BWU0 796 aaKnown RBP29.91■■■□□ 2.38
TRIM4-202ENST00000354241 TSPOAP1O95153 1857 aa29.91■■■□□ 2.38
TRIM4-202ENST00000354241 MYT1LQ9UL68 1186 aa29.9■■■□□ 2.38
TRIM4-202ENST00000354241 POGZQ7Z3K3 1410 aa29.89■■■□□ 2.38
TRIM4-202ENST00000354241 ERBINQ96RT1 1412 aa29.88■■■□□ 2.37
TRIM4-202ENST00000354241 NUP155O75694 1391 aa29.87■■■□□ 2.37
TRIM4-202ENST00000354241 KIF13AQ9H1H9 1805 aa29.87■■■□□ 2.37
TRIM4-202ENST00000354241 KDM5DQ9BY66 1539 aa29.86■■■□□ 2.37
TRIM4-202ENST00000354241 KDM5CP41229 1560 aa29.85■■■□□ 2.37
TRIM4-202ENST00000354241 FOXD1Q16676 465 aa29.84■■■□□ 2.37
TRIM4-202ENST00000354241 KIDINS220Q9ULH0 1771 aa29.84■■■□□ 2.37
TRIM4-202ENST00000354241 UNC13BO14795 1591 aa29.84■■■□□ 2.37
TRIM4-202ENST00000354241 PPRC1Q5VV67 1664 aaKnown RBP29.84■■■□□ 2.37
TRIM4-202ENST00000354241 HECW2Q9P2P5 1572 aa29.8■■■□□ 2.36
TRIM4-202ENST00000354241 RICTORQ6R327 1708 aa29.78■■■□□ 2.36
TRIM4-202ENST00000354241 TEX14Q8IWB6 1497 aa29.78■■■□□ 2.36
TRIM4-202ENST00000354241 RAPGEF3O95398 923 aa29.77■■■□□ 2.36
TRIM4-202ENST00000354241 MLH3Q9UHC1 1453 aa29.76■■■□□ 2.35
TRIM4-202ENST00000354241 PKD2Q13563 968 aa29.76■■■□□ 2.35
TRIM4-202ENST00000354241 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.76■■■□□ 2.351e-7■■■■□ 20.2
TRIM4-202ENST00000354241 FAM135AQ9P2D6 1515 aa29.75■■■□□ 2.35
TRIM4-202ENST00000354241 ANKRD30BQ9BXX2 1392 aa29.74■■■□□ 2.35
TRIM4-202ENST00000354241 TIMELESSQ9UNS1 1208 aa29.74■■■□□ 2.35
TRIM4-202ENST00000354241 IQGAP3Q86VI3 1631 aa29.72■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms