RNA–Protein interactions for RNA: ENST00000349384.10

RREB1-202, Transcript of ras responsive element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene RREB1, Length 7,440 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RREB1-202ENST00000349384 KIAA1211Q6ZU35 1233 aa18.06■□□□□ 0.48
RREB1-202ENST00000349384 VPS53Q5VIR6 699 aa18.05■□□□□ 0.48
RREB1-202ENST00000349384 CSRNP3Q8WYN3 585 aa18.05■□□□□ 0.48
RREB1-202ENST00000349384 FOXD4L6Q3SYB3 417 aaPredicted RBP18.04■□□□□ 0.48
RREB1-202ENST00000349384 FOXD4L3Q6VB84 417 aaPredicted RBP18.04■□□□□ 0.48
RREB1-202ENST00000349384 RBM19Q9Y4C8 960 aaKnown RBP18.03■□□□□ 0.48
RREB1-202ENST00000349384 TPM4P67936 248 aa18.02■□□□□ 0.48
RREB1-202ENST00000349384 GBP4Q96PP9 640 aa18.02■□□□□ 0.48
RREB1-202ENST00000349384 KRI1Q8N9T8 703 aaKnown RBP18.02■□□□□ 0.48
RREB1-202ENST00000349384 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.01■□□□□ 0.47
RREB1-202ENST00000349384 GOLGA6L3A6NEY3 463 aa18■□□□□ 0.47
RREB1-202ENST00000349384 KCNH8Q96L42 1107 aa18■□□□□ 0.47
RREB1-202ENST00000349384 TPM3P06753 285 aa17.99■□□□□ 0.47
RREB1-202ENST00000349384 ZNF592Q92610 1267 aa17.99■□□□□ 0.47
RREB1-202ENST00000349384 NUDCQ9Y266 331 aa17.99■□□□□ 0.47
RREB1-202ENST00000349384 RRP12Q5JTH9 1297 aaKnown RBP17.98■□□□□ 0.47
RREB1-202ENST00000349384 MFAP1P55081 439 aaKnown RBP17.97■□□□□ 0.47
RREB1-202ENST00000349384 CHMP3Q9Y3E7 222 aa17.96■□□□□ 0.47
RREB1-202ENST00000349384 POGKQ9P215 609 aa17.96■□□□□ 0.47
RREB1-202ENST00000349384 CARD11Q9BXL7 1154 aa17.94■□□□□ 0.46
RREB1-202ENST00000349384 TRIM6-TRIM34B2RNG4 842 aa17.93■□□□□ 0.46
RREB1-202ENST00000349384 SYAP1Q96A49 352 aaPredicted RBP17.93■□□□□ 0.46
RREB1-202ENST00000349384 CALD1Q05682 793 aaKnown RBP17.92■□□□□ 0.46
RREB1-202ENST00000349384 DHX37Q8IY37 1157 aaKnown RBP17.92■□□□□ 0.46
RREB1-202ENST00000349384 CCDC9Q9Y3X0 531 aaKnown RBP17.92■□□□□ 0.46
RREB1-202ENST00000349384 SAFB2Q14151 953 aaKnown RBP eCLIP17.92■□□□□ 0.46
RREB1-202ENST00000349384 MARCH6O60337 910 aa17.91■□□□□ 0.46
RREB1-202ENST00000349384 TPD52L1Q16890 204 aaPredicted RBP17.9■□□□□ 0.46
RREB1-202ENST00000349384 TOMM22Q9NS69 142 aa17.9■□□□□ 0.46
RREB1-202ENST00000349384 PLCD4Q9BRC7 762 aa17.9■□□□□ 0.46
RREB1-202ENST00000349384 CHMP4BQ9H444 224 aaKnown RBP17.89■□□□□ 0.45
RREB1-202ENST00000349384 GORABQ5T7V8 394 aa17.89■□□□□ 0.45
RREB1-202ENST00000349384 APPP05067 770 aa17.88■□□□□ 0.45
RREB1-202ENST00000349384 HTATSF1O43719 755 aaKnown RBP17.87■□□□□ 0.45
RREB1-202ENST00000349384 FAM13BQ9NYF5 915 aa17.87■□□□□ 0.45
RREB1-202ENST00000349384 ITPRIPQ8IWB1 547 aa17.86■□□□□ 0.45
RREB1-202ENST00000349384 MS4A1P11836 297 aa17.86■□□□□ 0.45
RREB1-202ENST00000349384 SF3A1Q15459 793 aaKnown RBP17.86■□□□□ 0.45
RREB1-202ENST00000349384 CNKSR2Q8WXI2 1034 aa17.85■□□□□ 0.45
RREB1-202ENST00000349384 RTF1Q92541 710 aaKnown RBP17.83■□□□□ 0.44
RREB1-202ENST00000349384 FBXW7Q969H0 707 aa17.82■□□□□ 0.44
RREB1-202ENST00000349384 SKIDA1Q1XH10 827 aa17.82■□□□□ 0.44
RREB1-202ENST00000349384 TSR1Q2NL82 804 aaKnown RBP17.82■□□□□ 0.44
RREB1-202ENST00000349384 USP35Q9P2H5 1018 aa17.82■□□□□ 0.44
RREB1-202ENST00000349384 G3V3G9 751 aa17.81■□□□□ 0.44
RREB1-202ENST00000349384 DCAF8Q5TAQ9 597 aa17.81■□□□□ 0.44
RREB1-202ENST00000349384 PCMTD1Q96MG8 357 aaPredicted RBP17.81■□□□□ 0.44
RREB1-202ENST00000349384 MAP7D2Q96T17 732 aa17.81■□□□□ 0.44
RREB1-202ENST00000349384 RAD21O60216 631 aa17.81■□□□□ 0.44
RREB1-202ENST00000349384 SLC4A3P48751 1232 aa17.81■□□□□ 0.44
RREB1-202ENST00000349384 MTUS2Q5JR59 1369 aa17.8■□□□□ 0.44
RREB1-202ENST00000349384 CDCA8Q53HL2 280 aa17.8■□□□□ 0.44
RREB1-202ENST00000349384 CCDC34Q96HJ3 373 aa17.79■□□□□ 0.44
RREB1-202ENST00000349384 GOLGA6L19H0YKK7 550 aa17.76■□□□□ 0.43
RREB1-202ENST00000349384 PAK3O75914 559 aaPredicted RBP17.76■□□□□ 0.43
RREB1-202ENST00000349384 SLC4A10Q6U841 1118 aa17.76■□□□□ 0.43
RREB1-202ENST00000349384 GPS2Q13227 327 aa17.76■□□□□ 0.43
RREB1-202ENST00000349384 FRAT2O75474 233 aaPredicted RBP17.76■□□□□ 0.43
RREB1-202ENST00000349384 SRPK2P78362 688 aaKnown RBP17.76■□□□□ 0.43
RREB1-202ENST00000349384 MAPK8IP2Q13387 824 aaPredicted RBP17.76■□□□□ 0.43
RREB1-202ENST00000349384 SIN3AQ96ST3 1273 aa17.74■□□□□ 0.43
RREB1-202ENST00000349384 TMX4Q9H1E5 349 aaPredicted RBP17.74■□□□□ 0.43
RREB1-202ENST00000349384 CCDC70Q6NSX1 233 aa17.74■□□□□ 0.43
RREB1-202ENST00000349384 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.74■□□□□ 0.431e-6■■■■■ 73.7
RREB1-202ENST00000349384 H3BQV1 296 aa17.73■□□□□ 0.43
RREB1-202ENST00000349384 IFFO2Q5TF58 517 aa17.73■□□□□ 0.43
RREB1-202ENST00000349384 CLUAP1Q96AJ1 413 aa17.73■□□□□ 0.43
RREB1-202ENST00000349384 BECN2A8MW95 431 aa17.73■□□□□ 0.43
RREB1-202ENST00000349384 HOMER1Q86YM7 354 aa17.72■□□□□ 0.43
RREB1-202ENST00000349384 MCTP1Q6DN14 999 aa17.72■□□□□ 0.43
RREB1-202ENST00000349384 ABCC9O60706 1549 aa17.71■□□□□ 0.43
RREB1-202ENST00000349384 RSPH6AQ9H0K4 717 aa17.71■□□□□ 0.42
RREB1-202ENST00000349384 PHF14O94880 888 aa17.7■□□□□ 0.42
RREB1-202ENST00000349384 HSP90AB3PQ58FF7 597 aa17.7■□□□□ 0.42
RREB1-202ENST00000349384 CSPP1Q1MSJ5 1256 aa17.7■□□□□ 0.42
RREB1-202ENST00000349384 KIF16BQ96L93 1317 aa17.7■□□□□ 0.42
RREB1-202ENST00000349384 NAP1L1P55209 391 aaKnown RBP17.7■□□□□ 0.42
RREB1-202ENST00000349384 MORC1Q86VD1 984 aa17.7■□□□□ 0.42
RREB1-202ENST00000349384 TEX35Q5T0J7 233 aa17.7■□□□□ 0.42
RREB1-202ENST00000349384 STK26Q9P289 416 aa17.69■□□□□ 0.42
RREB1-202ENST00000349384 CSB-PGBD3P0DP91 1061 aa17.69■□□□□ 0.42
RREB1-202ENST00000349384 DDX49Q9Y6V7 483 aaKnown RBP17.69■□□□□ 0.42
RREB1-202ENST00000349384 MLECQ14165 292 aa17.67■□□□□ 0.42
RREB1-202ENST00000349384 SAMD1Q6SPF0 538 aaPredicted RBP17.67■□□□□ 0.42
RREB1-202ENST00000349384 TPM1P09493 284 aa17.66■□□□□ 0.42
RREB1-202ENST00000349384 RUFY1Q96T51 708 aa17.66■□□□□ 0.42
RREB1-202ENST00000349384 FOSBP53539 338 aa17.66■□□□□ 0.42
RREB1-202ENST00000349384 GPATCH3Q96I76 525 aa17.66■□□□□ 0.42
RREB1-202ENST00000349384 TCEAL9Q9UHQ7 104 aa17.66■□□□□ 0.42
RREB1-202ENST00000349384 H0YHG0 523 aa17.65■□□□□ 0.42
RREB1-202ENST00000349384 RILPL2Q969X0 211 aa17.65■□□□□ 0.42
RREB1-202ENST00000349384 TTLL5Q6EMB2 1281 aa17.65■□□□□ 0.42
RREB1-202ENST00000349384 FAM184AQ8NB25 1140 aa17.65■□□□□ 0.42
RREB1-202ENST00000349384 CFAP44Q96MT7 982 aa17.65■□□□□ 0.42
RREB1-202ENST00000349384 TPM2P07951 284 aa17.65■□□□□ 0.42
RREB1-202ENST00000349384 RWDD1Q9H446 243 aaPredicted RBP17.65■□□□□ 0.42
RREB1-202ENST00000349384 IPO9Q96P70 1041 aaKnown RBP17.65■□□□□ 0.42
RREB1-202ENST00000349384 ZFYVE27Q5T4F4 411 aa17.64■□□□□ 0.41
RREB1-202ENST00000349384 IPO8O15397 1037 aaKnown RBP17.64■□□□□ 0.41
RREB1-202ENST00000349384 MEX3CQ5U5Q3 659 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms