RNA–Protein interactions for RNA: ENST00000348427.7

IKZF3-204, Transcript of IKAROS family zinc finger 3, humanhuman

TSL 1 (best)

Gene IKZF3, Length 2,056 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKZF3-204ENST00000348427 TOM1O60784 492 aa11.39□□□□□ -0.59
IKZF3-204ENST00000348427 SENP3Q9H4L4 574 aaPredicted RBP11.37□□□□□ -0.59
IKZF3-204ENST00000348427 C9orf84Q5VXU9 1444 aa11.36□□□□□ -0.59
IKZF3-204ENST00000348427 TRAPPC8Q9Y2L5 1435 aa11.35□□□□□ -0.59
IKZF3-204ENST00000348427 ATP10AO60312 1499 aa11.35□□□□□ -0.59
IKZF3-204ENST00000348427 MLECQ14165 292 aa11.35□□□□□ -0.59
IKZF3-204ENST00000348427 FAM9AQ8IZU1 332 aaPredicted RBP11.35□□□□□ -0.59
IKZF3-204ENST00000348427 SLC24A1O60721 1099 aa11.33□□□□□ -0.6
IKZF3-204ENST00000348427 PKD2Q13563 968 aa11.33□□□□□ -0.6
IKZF3-204ENST00000348427 ZNF335Q9H4Z2 1342 aaPredicted RBP11.33□□□□□ -0.6
IKZF3-204ENST00000348427 CPS1P31327 1500 aa11.33□□□□□ -0.6
IKZF3-204ENST00000348427 CEBPAP49715 358 aaPredicted RBP11.32□□□□□ -0.6
IKZF3-204ENST00000348427 ATP10BO94823 1461 aa11.32□□□□□ -0.6
IKZF3-204ENST00000348427 PTPRKQ15262 1439 aa11.32□□□□□ -0.6
IKZF3-204ENST00000348427 PLA2R1Q13018 1463 aa11.32□□□□□ -0.6
IKZF3-204ENST00000348427 CAMSAP1Q5T5Y3 1602 aa11.31□□□□□ -0.6
IKZF3-204ENST00000348427 HECW1Q76N89 1606 aa11.31□□□□□ -0.6
IKZF3-204ENST00000348427 C3P01024 1663 aa11.3□□□□□ -0.6
IKZF3-204ENST00000348427 SCAF1Q9H7N4 1312 aaKnown RBP11.29□□□□□ -0.6
IKZF3-204ENST00000348427 NPATQ14207 1427 aa11.28□□□□□ -0.6
IKZF3-204ENST00000348427 RAPGEF2Q9Y4G8 1499 aa11.28□□□□□ -0.6
IKZF3-204ENST00000348427 PIP4K2BP78356 416 aa11.28□□□□□ -0.6
IKZF3-204ENST00000348427 RGS17Q9UGC6 210 aaPredicted RBP11.28□□□□□ -0.6
IKZF3-204ENST00000348427 REREQ9P2R6 1566 aa11.27□□□□□ -0.61
IKZF3-204ENST00000348427 CNTLNQ9NXG0 1405 aa11.27□□□□□ -0.61
IKZF3-204ENST00000348427 AGLP35573 1532 aa11.26□□□□□ -0.61
IKZF3-204ENST00000348427 TCOF1Q13428 1488 aaKnown RBP11.25□□□□□ -0.61
IKZF3-204ENST00000348427 CTTNBP2Q8WZ74 1663 aa11.24□□□□□ -0.61
IKZF3-204ENST00000348427 KCNA4P22459 653 aa11.24□□□□□ -0.61
IKZF3-204ENST00000348427 ZNF142P52746 1687 aaPredicted RBP11.23□□□□□ -0.61
IKZF3-204ENST00000348427 PPP6R1Q9UPN7 881 aa11.23□□□□□ -0.61
IKZF3-204ENST00000348427 NCKAP5LQ9HCH0 1330 aa11.22□□□□□ -0.61
IKZF3-204ENST00000348427 ESF1Q9H501 851 aaKnown RBP11.21□□□□□ -0.61
IKZF3-204ENST00000348427 MROH2AA6NES4 1674 aa11.21□□□□□ -0.62
IKZF3-204ENST00000348427 SCAPERQ9BY12 1400 aa11.19□□□□□ -0.62
IKZF3-204ENST00000348427 SHANK2Q9UPX8 1470 aa11.19□□□□□ -0.62
IKZF3-204ENST00000348427 ALKQ9UM73 1620 aa11.19□□□□□ -0.62
IKZF3-204ENST00000348427 POTEAQ6S8J7 498 aa11.18□□□□□ -0.62
IKZF3-204ENST00000348427 RAPGEF6Q8TEU7 1601 aa11.17□□□□□ -0.62
IKZF3-204ENST00000348427 SUPT6HQ7KZ85 1726 aaKnown RBP11.16□□□□□ -0.62
IKZF3-204ENST00000348427 UPF1Q92900 1129 aaKnown RBP eCLIP11.16□□□□□ -0.62
IKZF3-204ENST00000348427 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.16□□□□□ -0.62
IKZF3-204ENST00000348427 SETD1AO15047 1707 aaKnown RBP11.15□□□□□ -0.63
IKZF3-204ENST00000348427 ZNF518AQ6AHZ1 1483 aa11.14□□□□□ -0.63
IKZF3-204ENST00000348427 KDM5CP41229 1560 aa11.14□□□□□ -0.63
IKZF3-204ENST00000348427 CEP170BQ9Y4F5 1589 aaPredicted RBP11.14□□□□□ -0.63
IKZF3-204ENST00000348427 MYO3AQ8NEV4 1616 aa11.14□□□□□ -0.63
IKZF3-204ENST00000348427 DIP2CQ9Y2E4 1556 aa11.13□□□□□ -0.63
IKZF3-204ENST00000348427 PLEKHD1A6NEE1 506 aa11.13□□□□□ -0.63
IKZF3-204ENST00000348427 RNF17Q9BXT8 1623 aaKnown RBP11.13□□□□□ -0.63
IKZF3-204ENST00000348427 PLCH2O75038 1416 aa11.12□□□□□ -0.63
IKZF3-204ENST00000348427 POLR1AO95602 1720 aaPredicted RBP11.1□□□□□ -0.63
IKZF3-204ENST00000348427 ARID3CA6NKF2 412 aa11.1□□□□□ -0.63
IKZF3-204ENST00000348427 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.1□□□□□ -0.63
IKZF3-204ENST00000348427 FOXD1Q16676 465 aa11.1□□□□□ -0.63
IKZF3-204ENST00000348427 HNRNPUL2Q1KMD3 747 aaKnown RBP11.1□□□□□ -0.63
IKZF3-204ENST00000348427 SYNMO15061 1565 aa11.1□□□□□ -0.63
IKZF3-204ENST00000348427 VWDEQ8N2E2 1590 aa11.09□□□□□ -0.63
IKZF3-204ENST00000348427 MLH3Q9UHC1 1453 aa11.09□□□□□ -0.63
IKZF3-204ENST00000348427 NUP153P49790 1475 aaKnown RBP11.08□□□□□ -0.64
IKZF3-204ENST00000348427 EFCAB2Q5VUJ9 269 aa11.07□□□□□ -0.64
IKZF3-204ENST00000348427 ZMYM3Q14202 1370 aa11.07□□□□□ -0.64
IKZF3-204ENST00000348427 A2ML1A8K2U0 1454 aa11.07□□□□□ -0.64
IKZF3-204ENST00000348427 CSRNP3Q8WYN3 585 aa11.07□□□□□ -0.64
IKZF3-204ENST00000348427 NEURL4Q96JN8 1562 aa11.06□□□□□ -0.64
IKZF3-204ENST00000348427 ABCA6Q8N139 1617 aa11.05□□□□□ -0.64
IKZF3-204ENST00000348427 FAM135BQ49AJ0 1406 aa11.04□□□□□ -0.64
IKZF3-204ENST00000348427 SAMD9Q5K651 1589 aa11.04□□□□□ -0.64
IKZF3-204ENST00000348427 CDK12Q9NYV4 1490 aaPredicted RBP11.04□□□□□ -0.64
IKZF3-204ENST00000348427 MYO5CQ9NQX4 1742 aa11.03□□□□□ -0.64
IKZF3-204ENST00000348427 DNMT1P26358 1616 aaKnown RBP11.03□□□□□ -0.64
IKZF3-204ENST00000348427 MED14O60244 1454 aa11.02□□□□□ -0.65
IKZF3-204ENST00000348427 LRRC7Q96NW7 1537 aa11.02□□□□□ -0.65
IKZF3-204ENST00000348427 DEPDC5O75140 1603 aa11.02□□□□□ -0.65
IKZF3-204ENST00000348427 CDK13Q14004 1512 aaKnown RBP11□□□□□ -0.65
IKZF3-204ENST00000348427 ZNF772Q68DY9 489 aaPredicted RBP10.99□□□□□ -0.65
IKZF3-204ENST00000348427 MYT1LQ9UL68 1186 aa10.98□□□□□ -0.65
IKZF3-204ENST00000348427 ANKLE2Q86XL3 938 aa10.97□□□□□ -0.65
IKZF3-204ENST00000348427 NPHP4O75161 1426 aaPredicted RBP10.97□□□□□ -0.65
IKZF3-204ENST00000348427 ADRA2BP18089 450 aa10.96□□□□□ -0.65
IKZF3-204ENST00000348427 AFAP1Q8N556 730 aa10.96□□□□□ -0.65
IKZF3-204ENST00000348427 CLTCQ00610 1675 aaKnown RBP10.96□□□□□ -0.66
IKZF3-204ENST00000348427 ZRANB1Q9UGI0 708 aa10.94□□□□□ -0.66
IKZF3-204ENST00000348427 IQGAP1P46940 1657 aa10.94□□□□□ -0.66
IKZF3-204ENST00000348427 LRRC9Q6ZRR7 1453 aa10.94□□□□□ -0.66
IKZF3-204ENST00000348427 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.93□□□□□ -0.66
IKZF3-204ENST00000348427 KIDINS220Q9ULH0 1771 aa10.93□□□□□ -0.66
IKZF3-204ENST00000348427 KDM5DQ9BY66 1539 aa10.93□□□□□ -0.66
IKZF3-204ENST00000348427 IFFO2Q5TF58 517 aa10.93□□□□□ -0.66
IKZF3-204ENST00000348427 P3H3Q8IVL6 736 aa10.93□□□□□ -0.66
IKZF3-204ENST00000348427 PRXQ9BXM0 1461 aa10.93□□□□□ -0.66
IKZF3-204ENST00000348427 STRCP1A6NGW2 1772 aa10.93□□□□□ -0.66
IKZF3-204ENST00000348427 JCADQ9P266 1359 aa10.93□□□□□ -0.66
IKZF3-204ENST00000348427 ARHGAP5Q13017 1502 aa10.92□□□□□ -0.66
IKZF3-204ENST00000348427 POTEDQ86YR6 584 aa10.91□□□□□ -0.66
IKZF3-204ENST00000348427 THEMISQ8N1K5 641 aaPredicted RBP10.91□□□□□ -0.66
IKZF3-204ENST00000348427 RXRBP28702 533 aa10.91□□□□□ -0.66
IKZF3-204ENST00000348427 TRIM52Q96A61 297 aa10.9□□□□□ -0.66
IKZF3-204ENST00000348427 ITSN2Q9NZM3 1697 aa10.9□□□□□ -0.66
IKZF3-204ENST00000348427 FAM135AQ9P2D6 1515 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms