RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 TPRNQ4KMQ1 711 aa24.01■■□□□ 1.43
UBE3C-201ENST00000348165 OS9Q13438 667 aaPredicted RBP24■■□□□ 1.43
UBE3C-201ENST00000348165 NPHP1O15259 732 aa23.99■■□□□ 1.43
UBE3C-201ENST00000348165 FHOD3Q2V2M9 1422 aa23.98■■□□□ 1.43
UBE3C-201ENST00000348165 ANKRD30AQ9BXX3 1397 aa23.98■■□□□ 1.43
UBE3C-201ENST00000348165 MS4A1P11836 297 aa23.97■■□□□ 1.43
UBE3C-201ENST00000348165 WIZO95785 1651 aa23.97■■□□□ 1.43
UBE3C-201ENST00000348165 JPH4Q96JJ6 628 aa23.97■■□□□ 1.43
UBE3C-201ENST00000348165 CHMP4BQ9H444 224 aaKnown RBP23.96■■□□□ 1.43
UBE3C-201ENST00000348165 HDGFL2Q7Z4V5 671 aaPredicted RBP23.95■■□□□ 1.42
UBE3C-201ENST00000348165 ROCK2O75116 1388 aaKnown RBP23.94■■□□□ 1.42
UBE3C-201ENST00000348165 CCER2I3L3R5 266 aa23.94■■□□□ 1.42
UBE3C-201ENST00000348165 RTN4Q9NQC3 1192 aaKnown RBP23.94■■□□□ 1.42
UBE3C-201ENST00000348165 PAK3O75914 559 aaPredicted RBP23.92■■□□□ 1.42
UBE3C-201ENST00000348165 TAOK2Q9UL54 1235 aa23.92■■□□□ 1.42
UBE3C-201ENST00000348165 TOP2AP11388 1531 aaKnown RBP23.92■■□□□ 1.42
UBE3C-201ENST00000348165 L3MBTL2Q969R5 705 aa23.91■■□□□ 1.42
UBE3C-201ENST00000348165 KTN1Q86UP2 1357 aaKnown RBP23.91■■□□□ 1.42
UBE3C-201ENST00000348165 RAPGEF2Q9Y4G8 1499 aa23.91■■□□□ 1.42
UBE3C-201ENST00000348165 NUTM2DQ5VT03 806 aaPredicted RBP23.9■■□□□ 1.42
UBE3C-201ENST00000348165 U2AF1L5P0DN76 240 aaPredicted RBP23.9■■□□□ 1.42
UBE3C-201ENST00000348165 U2AF1Q01081 240 aaKnown RBP eCLIP23.9■■□□□ 1.425e-9■■□□□ 14.3
UBE3C-201ENST00000348165 ERICH6BQ5W0A0 696 aa23.89■■□□□ 1.42
UBE3C-201ENST00000348165 SPAG9O60271 1321 aaKnown RBP23.88■■□□□ 1.41
UBE3C-201ENST00000348165 RTF1Q92541 710 aaKnown RBP23.88■■□□□ 1.41
UBE3C-201ENST00000348165 CDK11BP21127 795 aaKnown RBP23.87■■□□□ 1.41
UBE3C-201ENST00000348165 TRIM44Q96DX7 344 aaPredicted RBP23.86■■□□□ 1.41
UBE3C-201ENST00000348165 ATAD2BQ9ULI0 1458 aa23.85■■□□□ 1.41
UBE3C-201ENST00000348165 KCNJ4P48050 445 aa23.85■■□□□ 1.41
UBE3C-201ENST00000348165 ZRSR1Q15695 479 aaKnown RBP23.84■■□□□ 1.41
UBE3C-201ENST00000348165 FGD1P98174 961 aa23.84■■□□□ 1.41
UBE3C-201ENST00000348165 WASHC2CQ9Y4E1 1318 aa23.84■■□□□ 1.41
UBE3C-201ENST00000348165 RSPH4AQ5TD94 716 aa23.79■■□□□ 1.4
UBE3C-201ENST00000348165 APBB1O00213 710 aa23.78■■□□□ 1.4
UBE3C-201ENST00000348165 RALBP1Q15311 655 aa23.78■■□□□ 1.4
UBE3C-201ENST00000348165 NAP1L2Q9ULW6 460 aaPredicted RBP23.77■■□□□ 1.4
UBE3C-201ENST00000348165 HSP90AB1P08238 724 aaKnown RBP23.77■■□□□ 1.4
UBE3C-201ENST00000348165 GOLGA2Q08379 1002 aa23.77■■□□□ 1.4
UBE3C-201ENST00000348165 CSB-PGBD3P0DP91 1061 aa23.77■■□□□ 1.39
UBE3C-201ENST00000348165 PTMAP06454 111 aaKnown RBP23.75■■□□□ 1.39
UBE3C-201ENST00000348165 CCDC18Q5T9S5 1454 aa23.74■■□□□ 1.39
UBE3C-201ENST00000348165 RUSC2Q8N2Y8 1516 aa23.74■■□□□ 1.39
UBE3C-201ENST00000348165 DEKP35659 375 aaKnown RBP23.74■■□□□ 1.39
UBE3C-201ENST00000348165 NUTM2FA1L443 756 aa23.74■■□□□ 1.39
UBE3C-201ENST00000348165 NAP1L5Q96NT1 182 aaPredicted RBP23.73■■□□□ 1.39
UBE3C-201ENST00000348165 TULP1O00294 542 aaPredicted RBP23.73■■□□□ 1.39
UBE3C-201ENST00000348165 RCAN3Q9UKA8 241 aa23.72■■□□□ 1.39
UBE3C-201ENST00000348165 IPO8O15397 1037 aaKnown RBP23.71■■□□□ 1.39
UBE3C-201ENST00000348165 TRAK1Q9UPV9 953 aa23.71■■□□□ 1.39
UBE3C-201ENST00000348165 ZNF330Q9Y3S2 320 aaPredicted RBP23.71■■□□□ 1.39
UBE3C-201ENST00000348165 TERF2IPQ9NYB0 399 aa23.7■■□□□ 1.38
UBE3C-201ENST00000348165 NOP58Q9Y2X3 529 aaKnown RBP23.7■■□□□ 1.38
UBE3C-201ENST00000348165 EID1Q9Y6B2 187 aa23.69■■□□□ 1.38
UBE3C-201ENST00000348165 FANCD2Q9BXW9 1451 aa23.69■■□□□ 1.38
UBE3C-201ENST00000348165 PLCB2Q00722 1185 aa23.68■■□□□ 1.38
UBE3C-201ENST00000348165 EIF3AQ14152 1382 aaKnown RBP23.68■■□□□ 1.38
UBE3C-201ENST00000348165 CYB5RLQ6IPT4 315 aa23.67■■□□□ 1.38
UBE3C-201ENST00000348165 NGDNQ8NEJ9 315 aaKnown RBP23.67■■□□□ 1.38
UBE3C-201ENST00000348165 CCDC146Q8IYE0 955 aa23.66■■□□□ 1.38
UBE3C-201ENST00000348165 ITPRIPQ8IWB1 547 aa23.65■■□□□ 1.38
UBE3C-201ENST00000348165 CALD1Q05682 793 aaKnown RBP23.65■■□□□ 1.38
UBE3C-201ENST00000348165 SPRYD3Q8NCJ5 442 aa23.65■■□□□ 1.38
UBE3C-201ENST00000348165 ST20-MTHFSA0A0A6YYL1 179 aa23.65■■□□□ 1.38
UBE3C-201ENST00000348165 PTPRGP23470 1445 aa23.65■■□□□ 1.38
UBE3C-201ENST00000348165 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.64■■□□□ 1.37
UBE3C-201ENST00000348165 HSCBQ8IWL3 235 aa23.63■■□□□ 1.37
UBE3C-201ENST00000348165 NLRP13Q86W25 1043 aa23.62■■□□□ 1.37
UBE3C-201ENST00000348165 SMARCA4P51532 1647 aa23.61■■□□□ 1.37
UBE3C-201ENST00000348165 CLUAP1Q96AJ1 413 aa23.59■■□□□ 1.37
UBE3C-201ENST00000348165 LTV1Q96GA3 475 aaPredicted RBP23.59■■□□□ 1.37
UBE3C-201ENST00000348165 DNTTIP2Q5QJE6 756 aaKnown RBP23.59■■□□□ 1.37
UBE3C-201ENST00000348165 SMC4Q9NTJ3 1288 aa23.57■■□□□ 1.36
UBE3C-201ENST00000348165 MCCP23508 829 aa23.57■■□□□ 1.36
UBE3C-201ENST00000348165 STK31Q9BXU1 1019 aa23.56■■□□□ 1.36
UBE3C-201ENST00000348165 AMPHP49418 695 aa23.56■■□□□ 1.36
UBE3C-201ENST00000348165 RWDD1Q9H446 243 aaPredicted RBP23.56■■□□□ 1.36
UBE3C-201ENST00000348165 CCDC144AA2RUR9 1427 aa23.56■■□□□ 1.36
UBE3C-201ENST00000348165 GOLGA6L4A6NEF3 574 aa23.55■■□□□ 1.36
UBE3C-201ENST00000348165 CCDC9Q9Y3X0 531 aaKnown RBP23.54■■□□□ 1.36
UBE3C-201ENST00000348165 PANK3Q9H999 370 aa23.54■■□□□ 1.36
UBE3C-201ENST00000348165 RBM19Q9Y4C8 960 aaKnown RBP23.52■■□□□ 1.36
UBE3C-201ENST00000348165 DHX57Q6P158 1386 aaKnown RBP23.52■■□□□ 1.36
UBE3C-201ENST00000348165 OSCARQ8IYS5 282 aa23.51■■□□□ 1.35
UBE3C-201ENST00000348165 RRP7AQ9Y3A4 280 aaKnown RBP23.51■■□□□ 1.35
UBE3C-201ENST00000348165 KIAA1211Q6ZU35 1233 aa23.5■■□□□ 1.35
UBE3C-201ENST00000348165 SLC4A10Q6U841 1118 aa23.5■■□□□ 1.35
UBE3C-201ENST00000348165 IGF1RP08069 1367 aa23.5■■□□□ 1.35
UBE3C-201ENST00000348165 ISY1Q9ULR0 285 aaKnown RBP23.48■■□□□ 1.35
UBE3C-201ENST00000348165 VGFO15240 615 aaPredicted RBP23.47■■□□□ 1.35
UBE3C-201ENST00000348165 CHMP3Q9Y3E7 222 aa23.46■■□□□ 1.35
UBE3C-201ENST00000348165 RAD54L2Q9Y4B4 1467 aa23.46■■□□□ 1.35
UBE3C-201ENST00000348165 CFAP44Q96MT7 982 aa23.45■■□□□ 1.34
UBE3C-201ENST00000348165 CHMP4AQ9BY43 222 aa23.45■■□□□ 1.34
UBE3C-201ENST00000348165 CENPJQ9HC77 1338 aaPredicted RBP23.44■■□□□ 1.34
UBE3C-201ENST00000348165 FGD5Q6ZNL6 1462 aa23.44■■□□□ 1.34
UBE3C-201ENST00000348165 GAPVD1Q14C86 1478 aa23.43■■□□□ 1.34
UBE3C-201ENST00000348165 MINK1Q8N4C8 1332 aaPredicted RBP23.43■■□□□ 1.34
UBE3C-201ENST00000348165 ZNF644Q9H582 1327 aaPredicted RBP23.43■■□□□ 1.34
UBE3C-201ENST00000348165 ELL2O00472 640 aaPredicted RBP23.42■■□□□ 1.34
UBE3C-201ENST00000348165 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms