RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 CDC42BPBQ9Y5S2 1711 aa31.86■■■□□ 2.69
TSPAN3-202ENST00000346495 AKNAQ7Z591 1439 aa31.85■■■□□ 2.69
TSPAN3-202ENST00000346495 MYO5CQ9NQX4 1742 aa31.84■■■□□ 2.69
TSPAN3-202ENST00000346495 ABCC5O15440 1437 aa31.84■■■□□ 2.69
TSPAN3-202ENST00000346495 ZNF777Q9ULD5 760 aaPredicted RBP31.82■■■□□ 2.69
TSPAN3-202ENST00000346495 WDR7Q9Y4E6 1490 aa31.82■■■□□ 2.68
TSPAN3-202ENST00000346495 GCC2Q8IWJ2 1684 aa31.81■■■□□ 2.68
TSPAN3-202ENST00000346495 NAIPQ13075 1403 aa31.8■■■□□ 2.68
TSPAN3-202ENST00000346495 KCNH8Q96L42 1107 aa31.8■■■□□ 2.68
TSPAN3-202ENST00000346495 CLSPNQ9HAW4 1339 aa31.79■■■□□ 2.68
TSPAN3-202ENST00000346495 CROCC2H7BZ55 1655 aa31.78■■■□□ 2.68
TSPAN3-202ENST00000346495 ROCK1Q13464 1354 aa31.77■■■□□ 2.68
TSPAN3-202ENST00000346495 NPM1P06748 294 aaKnown RBP eCLIP31.77■■■□□ 2.68
TSPAN3-202ENST00000346495 CHIC2Q9UKJ5 165 aa31.76■■■□□ 2.67
TSPAN3-202ENST00000346495 ARHGAP5Q13017 1502 aa31.74■■■□□ 2.67
TSPAN3-202ENST00000346495 RIMBP3CA6NJZ7 1639 aa31.74■■■□□ 2.67
TSPAN3-202ENST00000346495 RIMBP3BA6NNM3 1639 aa31.74■■■□□ 2.67
TSPAN3-202ENST00000346495 RIMBP3Q9UFD9 1639 aa31.74■■■□□ 2.67
TSPAN3-202ENST00000346495 SAMD9LQ8IVG5 1584 aa31.73■■■□□ 2.67
TSPAN3-202ENST00000346495 ADGBQ8N7X0 1667 aa31.73■■■□□ 2.67
TSPAN3-202ENST00000346495 ASXL2Q76L83 1435 aa31.72■■■□□ 2.67
TSPAN3-202ENST00000346495 ARHGEF5Q12774 1597 aa31.71■■■□□ 2.67
TSPAN3-202ENST00000346495 PLCH2O75038 1416 aa31.7■■■□□ 2.67
TSPAN3-202ENST00000346495 RRP7BPQ9NSQ0 103 aa31.7■■■□□ 2.66
TSPAN3-202ENST00000346495 SHANK2Q9UPX8 1470 aa31.67■■■□□ 2.66
TSPAN3-202ENST00000346495 ARAP3Q8WWN8 1544 aa31.66■■■□□ 2.66
TSPAN3-202ENST00000346495 ABCA9Q8IUA7 1624 aa31.66■■■□□ 2.66
TSPAN3-202ENST00000346495 ADGRL2O95490 1459 aa31.65■■■□□ 2.66
TSPAN3-202ENST00000346495 PLEKHH2Q8IVE3 1493 aa31.65■■■□□ 2.66
TSPAN3-202ENST00000346495 MBD5Q9P267 1494 aa31.63■■■□□ 2.65
TSPAN3-202ENST00000346495 RSPH4AQ5TD94 716 aa31.62■■■□□ 2.65
TSPAN3-202ENST00000346495 CCDC141Q6ZP82 1450 aa31.6■■■□□ 2.65
TSPAN3-202ENST00000346495 KIAA1107Q9UPP5 1409 aa31.6■■■□□ 2.65
TSPAN3-202ENST00000346495 ACIN1Q9UKV3 1341 aaKnown RBP31.59■■■□□ 2.65
TSPAN3-202ENST00000346495 EFCAB2Q5VUJ9 269 aa31.59■■■□□ 2.65
TSPAN3-202ENST00000346495 NCOA1Q15788 1441 aa31.58■■■□□ 2.65
TSPAN3-202ENST00000346495 HNRNPMP52272 730 aaKnown RBP eCLIP31.58■■■□□ 2.65
TSPAN3-202ENST00000346495 SYCP2Q9BX26 1530 aa31.58■■■□□ 2.65
TSPAN3-202ENST00000346495 ANKRD30AQ9BXX3 1397 aa31.58■■■□□ 2.65
TSPAN3-202ENST00000346495 C9orf84Q5VXU9 1444 aa31.57■■■□□ 2.64
TSPAN3-202ENST00000346495 MAPKBP1O60336 1514 aa31.57■■■□□ 2.64
TSPAN3-202ENST00000346495 TSPY4P0CV99 314 aa31.57■■■□□ 2.64
TSPAN3-202ENST00000346495 TSPY10P0CW01 314 aa31.57■■■□□ 2.64
TSPAN3-202ENST00000346495 CYB5RLQ6IPT4 315 aa31.56■■■□□ 2.64
TSPAN3-202ENST00000346495 KDM6BO15054 1643 aa31.56■■■□□ 2.64
TSPAN3-202ENST00000346495 ABCC1P33527 1531 aa31.51■■■□□ 2.64
TSPAN3-202ENST00000346495 MAST1Q9Y2H9 1570 aa31.5■■■□□ 2.63
TSPAN3-202ENST00000346495 ARHGEF12Q9NZN5 1544 aa31.45■■■□□ 2.62
TSPAN3-202ENST00000346495 FANCAO15360 1455 aa31.44■■■□□ 2.62
TSPAN3-202ENST00000346495 TRIM52Q96A61 297 aa31.42■■■□□ 2.62
TSPAN3-202ENST00000346495 ANKRD50Q9ULJ7 1429 aa31.39■■■□□ 2.62
TSPAN3-202ENST00000346495 KIF15Q9NS87 1388 aa31.37■■■□□ 2.61
TSPAN3-202ENST00000346495 PLXNC1O60486 1568 aa31.37■■■□□ 2.61
TSPAN3-202ENST00000346495 CFAP74Q9C0B2 1584 aa31.37■■■□□ 2.61
TSPAN3-202ENST00000346495 CD109Q6YHK3 1445 aa31.36■■■□□ 2.61
TSPAN3-202ENST00000346495 TRAPPC8Q9Y2L5 1435 aa31.33■■■□□ 2.61
TSPAN3-202ENST00000346495 ADGRL1O94910 1474 aa31.31■■■□□ 2.6
TSPAN3-202ENST00000346495 MPHOSPH9Q99550 1183 aa31.29■■■□□ 2.6
TSPAN3-202ENST00000346495 GLI2P10070 1586 aa31.29■■■□□ 2.6
TSPAN3-202ENST00000346495 DENND4BO75064 1496 aaPredicted RBP31.27■■■□□ 2.6
TSPAN3-202ENST00000346495 RTEL1-TNFRSF6BF6WH68 1400 aa31.26■■■□□ 2.59
TSPAN3-202ENST00000346495 SCAPERQ9BY12 1400 aa31.25■■■□□ 2.59
TSPAN3-202ENST00000346495 MAP3K4Q9Y6R4 1608 aa31.25■■■□□ 2.59
TSPAN3-202ENST00000346495 SIN3AQ96ST3 1273 aa31.24■■■□□ 2.59
TSPAN3-202ENST00000346495 DUOX2Q9NRD8 1548 aa31.23■■■□□ 2.59
TSPAN3-202ENST00000346495 SPAG9O60271 1321 aaKnown RBP31.23■■■□□ 2.59
TSPAN3-202ENST00000346495 PZPP20742 1482 aa31.21■■■□□ 2.59
TSPAN3-202ENST00000346495 TIMELESSQ9UNS1 1208 aa31.21■■■□□ 2.59
TSPAN3-202ENST00000346495 ZFYVE16Q7Z3T8 1539 aa31.21■■■□□ 2.59
TSPAN3-202ENST00000346495 KDM5DQ9BY66 1539 aa31.2■■■□□ 2.58
TSPAN3-202ENST00000346495 AFAP1Q8N556 730 aa31.2■■■□□ 2.58
TSPAN3-202ENST00000346495 NEO1Q92859 1461 aa31.19■■■□□ 2.58
TSPAN3-202ENST00000346495 NEUROD1Q13562 356 aa31.19■■■□□ 2.58
TSPAN3-202ENST00000346495 INO80Q9ULG1 1556 aaPredicted RBP31.19■■■□□ 2.58
TSPAN3-202ENST00000346495 SLC4A1APQ9BWU0 796 aaKnown RBP31.18■■■□□ 2.58
TSPAN3-202ENST00000346495 DIP2BQ9P265 1576 aa31.18■■■□□ 2.58
TSPAN3-202ENST00000346495 ERBINQ96RT1 1412 aa31.16■■■□□ 2.58
TSPAN3-202ENST00000346495 ATP7AQ04656 1500 aa31.16■■■□□ 2.58
TSPAN3-202ENST00000346495 ZNF518AQ6AHZ1 1483 aa31.14■■■□□ 2.58
TSPAN3-202ENST00000346495 UNC13BO14795 1591 aa31.13■■■□□ 2.57
TSPAN3-202ENST00000346495 NUP155O75694 1391 aa31.12■■■□□ 2.57
TSPAN3-202ENST00000346495 POGZQ7Z3K3 1410 aa31.09■■■□□ 2.57
TSPAN3-202ENST00000346495 FAM69CQ0P6D2 419 aa31.08■■■□□ 2.57
TSPAN3-202ENST00000346495 KDM5CP41229 1560 aa31.07■■■□□ 2.56
TSPAN3-202ENST00000346495 ANKRD30BQ9BXX2 1392 aa31.07■■■□□ 2.56
TSPAN3-202ENST00000346495 TONSLQ96HA7 1378 aa31.05■■■□□ 2.56
TSPAN3-202ENST00000346495 KIDINS220Q9ULH0 1771 aa31.04■■■□□ 2.56
TSPAN3-202ENST00000346495 FOXD1Q16676 465 aa31.04■■■□□ 2.56
TSPAN3-202ENST00000346495 MYT1LQ9UL68 1186 aa31.02■■■□□ 2.56
TSPAN3-202ENST00000346495 MAGI2Q86UL8 1455 aa31.02■■■□□ 2.56
TSPAN3-202ENST00000346495 FAM135AQ9P2D6 1515 aa31.02■■■□□ 2.56
TSPAN3-202ENST00000346495 PKD2Q13563 968 aa31.01■■■□□ 2.55
TSPAN3-202ENST00000346495 IQGAP3Q86VI3 1631 aa31■■■□□ 2.55
TSPAN3-202ENST00000346495 MLH3Q9UHC1 1453 aa31■■■□□ 2.55
TSPAN3-202ENST00000346495 HECW2Q9P2P5 1572 aa30.99■■■□□ 2.55
TSPAN3-202ENST00000346495 EIF2AK4Q9P2K8 1649 aaKnown RBP30.97■■■□□ 2.55
TSPAN3-202ENST00000346495 PPRC1Q5VV67 1664 aaKnown RBP30.96■■■□□ 2.55
TSPAN3-202ENST00000346495 KIF13AQ9H1H9 1805 aa30.95■■■□□ 2.55
TSPAN3-202ENST00000346495 ZNF316A6NFI3 1004 aaPredicted RBP30.95■■■□□ 2.55
TSPAN3-202ENST00000346495 RPRD2Q5VT52 1461 aaKnown RBP30.95■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms