RNA–Protein interactions for RNA: ENST00000344791.6

LYSMD4-202, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LYSMD4, Length 2,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-202ENST00000344791 ZNF326Q5BKZ1 582 aaKnown RBP26.64■■□□□ 1.86
LYSMD4-202ENST00000344791 DAPK1P53355 1430 aa26.63■■□□□ 1.85
LYSMD4-202ENST00000344791 CDK11AQ9UQ88 783 aaPredicted RBP26.63■■□□□ 1.85
LYSMD4-202ENST00000344791 GCC2Q8IWJ2 1684 aa26.62■■□□□ 1.85
LYSMD4-202ENST00000344791 NBPF8Q3BBV2 869 aa26.62■■□□□ 1.85
LYSMD4-202ENST00000344791 DISP1Q96F81 1524 aa26.62■■□□□ 1.85
LYSMD4-202ENST00000344791 CCDC184Q52MB2 194 aa26.62■■□□□ 1.85
LYSMD4-202ENST00000344791 CFDP1Q9UEE9 299 aaPredicted RBP26.61■■□□□ 1.85
LYSMD4-202ENST00000344791 NUP153P49790 1475 aaKnown RBP26.61■■□□□ 1.85
LYSMD4-202ENST00000344791 PRG4Q92954 1404 aaPredicted RBP26.61■■□□□ 1.85
LYSMD4-202ENST00000344791 POLR3GLQ9BT43 218 aa26.61■■□□□ 1.85
LYSMD4-202ENST00000344791 IFT140Q96RY7 1462 aa26.6■■□□□ 1.85
LYSMD4-202ENST00000344791 ABCC5O15440 1437 aa26.6■■□□□ 1.85
LYSMD4-202ENST00000344791 KIAA0586Q9BVV6 1533 aa26.59■■□□□ 1.85
LYSMD4-202ENST00000344791 KIAA0556O60303 1618 aa26.57■■□□□ 1.84
LYSMD4-202ENST00000344791 FAM9BQ8IZU0 186 aa26.56■■□□□ 1.84
LYSMD4-202ENST00000344791 ERCC6Q03468 1493 aa26.55■■□□□ 1.84
LYSMD4-202ENST00000344791 GRIN2AQ12879 1464 aa26.55■■□□□ 1.84
LYSMD4-202ENST00000344791 PLB1Q6P1J6 1458 aa26.54■■□□□ 1.84
LYSMD4-202ENST00000344791 AKNAQ7Z591 1439 aa26.54■■□□□ 1.84
LYSMD4-202ENST00000344791 ANKRD30BQ9BXX2 1392 aa26.52■■□□□ 1.84
LYSMD4-202ENST00000344791 EIF4G3O43432 1585 aaKnown RBP26.49■■□□□ 1.83
LYSMD4-202ENST00000344791 RAPGEF6Q8TEU7 1601 aa26.48■■□□□ 1.83
LYSMD4-202ENST00000344791 SENP3-EIF4A1A0A087X0R7 540 aa26.46■■□□□ 1.83
LYSMD4-202ENST00000344791 MRS2Q9HD23 443 aa26.46■■□□□ 1.83
LYSMD4-202ENST00000344791 CCDC7Q96M83 1385 aa26.45■■□□□ 1.82
LYSMD4-202ENST00000344791 JPH4Q96JJ6 628 aa26.45■■□□□ 1.82
LYSMD4-202ENST00000344791 ROCK1Q13464 1354 aa26.45■■□□□ 1.82
LYSMD4-202ENST00000344791 CNTLNQ9NXG0 1405 aa26.44■■□□□ 1.82
LYSMD4-202ENST00000344791 RPRD2Q5VT52 1461 aaKnown RBP26.44■■□□□ 1.82
LYSMD4-202ENST00000344791 DNMT1P26358 1616 aaKnown RBP26.43■■□□□ 1.82
LYSMD4-202ENST00000344791 PKD2Q13563 968 aa26.43■■□□□ 1.82
LYSMD4-202ENST00000344791 PRKRIP1Q9H875 184 aaPredicted RBP26.43■■□□□ 1.82
LYSMD4-202ENST00000344791 CAMSAP2Q08AD1 1489 aa26.42■■□□□ 1.82
LYSMD4-202ENST00000344791 TROQ12816 1431 aaPredicted RBP26.41■■□□□ 1.82
LYSMD4-202ENST00000344791 KIF7Q2M1P5 1343 aa26.41■■□□□ 1.82
LYSMD4-202ENST00000344791 TEX14Q8IWB6 1497 aa26.37■■□□□ 1.81
LYSMD4-202ENST00000344791 NCOA1Q15788 1441 aa26.37■■□□□ 1.81
LYSMD4-202ENST00000344791 KIF14Q15058 1648 aa26.37■■□□□ 1.81
LYSMD4-202ENST00000344791 CEP170Q5SW79 1584 aa26.36■■□□□ 1.81
LYSMD4-202ENST00000344791 GPATCH8Q9UKJ3 1502 aaKnown RBP26.36■■□□□ 1.81
LYSMD4-202ENST00000344791 PLEKHD1A6NEE1 506 aa26.35■■□□□ 1.81
LYSMD4-202ENST00000344791 MYT1Q01538 1121 aa26.35■■□□□ 1.81
LYSMD4-202ENST00000344791 KDM2AQ9Y2K7 1162 aa26.34■■□□□ 1.81
LYSMD4-202ENST00000344791 PZPP20742 1482 aa26.33■■□□□ 1.81
LYSMD4-202ENST00000344791 RBM19Q9Y4C8 960 aaKnown RBP26.31■■□□□ 1.8
LYSMD4-202ENST00000344791 CARMIL2Q6F5E8 1435 aa26.3■■□□□ 1.8
LYSMD4-202ENST00000344791 SYNJ2O15056 1496 aa26.3■■□□□ 1.8
LYSMD4-202ENST00000344791 HNRNPMP52272 730 aaKnown RBP eCLIP26.29■■□□□ 1.8
LYSMD4-202ENST00000344791 ANKRD30AQ9BXX3 1397 aa26.27■■□□□ 1.8
LYSMD4-202ENST00000344791 MAGI1Q96QZ7 1491 aaPredicted RBP26.27■■□□□ 1.8
LYSMD4-202ENST00000344791 NUP155O75694 1391 aa26.27■■□□□ 1.8
LYSMD4-202ENST00000344791 ANKRD50Q9ULJ7 1429 aa26.25■■□□□ 1.79
LYSMD4-202ENST00000344791 TSPY4P0CV99 314 aa26.24■■□□□ 1.79
LYSMD4-202ENST00000344791 TSPY10P0CW01 314 aa26.24■■□□□ 1.79
LYSMD4-202ENST00000344791 SPATA31E1Q6ZUB1 1445 aa26.23■■□□□ 1.79
LYSMD4-202ENST00000344791 KIAA1107Q9UPP5 1409 aa26.23■■□□□ 1.79
LYSMD4-202ENST00000344791 USP47Q96K76 1375 aa26.23■■□□□ 1.79
LYSMD4-202ENST00000344791 CARD11Q9BXL7 1154 aa26.18■■□□□ 1.78
LYSMD4-202ENST00000344791 ITSN2Q9NZM3 1697 aa26.18■■□□□ 1.78
LYSMD4-202ENST00000344791 DCAF11Q8TEB1 546 aa26.17■■□□□ 1.78
LYSMD4-202ENST00000344791 C9orf84Q5VXU9 1444 aa26.15■■□□□ 1.78
LYSMD4-202ENST00000344791 ATP10BO94823 1461 aa26.15■■□□□ 1.78
LYSMD4-202ENST00000344791 B4GALNT3Q6L9W6 998 aa26.13■■□□□ 1.77
LYSMD4-202ENST00000344791 ANP32EQ9BTT0 268 aa26.13■■□□□ 1.77
LYSMD4-202ENST00000344791 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.13■■□□□ 1.77
LYSMD4-202ENST00000344791 NUP160Q12769 1436 aa26.13■■□□□ 1.77
LYSMD4-202ENST00000344791 RGL3Q3MIN7 710 aa26.12■■□□□ 1.77
LYSMD4-202ENST00000344791 ZBED9Q6R2W3 1325 aa26.11■■□□□ 1.77
LYSMD4-202ENST00000344791 ADGBQ8N7X0 1667 aa26.1■■□□□ 1.77
LYSMD4-202ENST00000344791 KIF15Q9NS87 1388 aa26.1■■□□□ 1.77
LYSMD4-202ENST00000344791 ST20-MTHFSA0A0A6YYL1 179 aa26.09■■□□□ 1.77
LYSMD4-202ENST00000344791 ADGRL2O95490 1459 aa26.09■■□□□ 1.77
LYSMD4-202ENST00000344791 BCORL1Q5H9F3 1711 aa26.06■■□□□ 1.76
LYSMD4-202ENST00000344791 DHX29Q7Z478 1369 aaKnown RBP26.06■■□□□ 1.76
LYSMD4-202ENST00000344791 CDC42BPAQ5VT25 1732 aa26.05■■□□□ 1.76
LYSMD4-202ENST00000344791 MBD5Q9P267 1494 aa26.05■■□□□ 1.76
LYSMD4-202ENST00000344791 PTPRGP23470 1445 aa26.05■■□□□ 1.76
LYSMD4-202ENST00000344791 CROCC2H7BZ55 1655 aa26.04■■□□□ 1.76
LYSMD4-202ENST00000344791 ADCY10Q96PN6 1610 aa26.03■■□□□ 1.76
LYSMD4-202ENST00000344791 ABCC10Q5T3U5 1492 aa26.03■■□□□ 1.76
LYSMD4-202ENST00000344791 PPP4R2Q9NY27 417 aa26.03■■□□□ 1.76
LYSMD4-202ENST00000344791 TMC1Q8TDI8 760 aa26.02■■□□□ 1.76
LYSMD4-202ENST00000344791 ABCA8O94911 1581 aa26.01■■□□□ 1.75
LYSMD4-202ENST00000344791 SALL2Q9Y467 1007 aaPredicted RBP26.01■■□□□ 1.75
LYSMD4-202ENST00000344791 ROCK2O75116 1388 aaKnown RBP25.96■■□□□ 1.75
LYSMD4-202ENST00000344791 KDM5CP41229 1560 aa25.95■■□□□ 1.74
LYSMD4-202ENST00000344791 MSH5O43196 834 aa25.93■■□□□ 1.74
LYSMD4-202ENST00000344791 NBPF1Q3BBV0 1214 aa25.93■■□□□ 1.74
LYSMD4-202ENST00000344791 POLR1AO95602 1720 aaPredicted RBP25.91■■□□□ 1.74
LYSMD4-202ENST00000344791 RALGAPBQ86X10 1494 aa25.9■■□□□ 1.74
LYSMD4-202ENST00000344791 SHANK2Q9UPX8 1470 aa25.89■■□□□ 1.74
LYSMD4-202ENST00000344791 PNISRQ8TF01 805 aaKnown RBP25.89■■□□□ 1.73
LYSMD4-202ENST00000344791 NUDCQ9Y266 331 aa25.86■■□□□ 1.73
LYSMD4-202ENST00000344791 CCDC141Q6ZP82 1450 aa25.86■■□□□ 1.73
LYSMD4-202ENST00000344791 CCDC144AA2RUR9 1427 aa25.86■■□□□ 1.73
LYSMD4-202ENST00000344791 UHRF1BP1Q6BDS2 1440 aa25.86■■□□□ 1.73
LYSMD4-202ENST00000344791 SAMD9LQ8IVG5 1584 aa25.84■■□□□ 1.73
LYSMD4-202ENST00000344791 ERICH6BQ5W0A0 696 aa25.83■■□□□ 1.73
LYSMD4-202ENST00000344791 ARHGAP5Q13017 1502 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms