RNA–Protein interactions for RNA: ENST00000344297.8

ATP7B-202, Transcript of ATPase copper transporting beta, humanhuman

TSL 5 BASIC

Gene ATP7B, Length 5,861 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7B-202ENST00000344297 CFTRP13569 1480 aa17.18■□□□□ 0.34
ATP7B-202ENST00000344297 SOX12O15370 315 aa17.17■□□□□ 0.34
ATP7B-202ENST00000344297 LAS1LQ9Y4W2 734 aaKnown RBP17.15■□□□□ 0.34
ATP7B-202ENST00000344297 TNNT2P45379 298 aaPredicted RBP17.15■□□□□ 0.34
ATP7B-202ENST00000344297 UACAQ9BZF9 1416 aa17.14■□□□□ 0.33
ATP7B-202ENST00000344297 U2SURPO15042 1029 aaKnown RBP17.14■□□□□ 0.33
ATP7B-202ENST00000344297 PRG4Q92954 1404 aaPredicted RBP17.14■□□□□ 0.33
ATP7B-202ENST00000344297 HSP90AA1P07900 732 aaKnown RBP17.13■□□□□ 0.33
ATP7B-202ENST00000344297 LAMC3Q9Y6N6 1575 aa17.13■□□□□ 0.33
ATP7B-202ENST00000344297 KANK4Q5T7N3 995 aaPredicted RBP17.12■□□□□ 0.33
ATP7B-202ENST00000344297 MORC1Q86VD1 984 aa17.12■□□□□ 0.33
ATP7B-202ENST00000344297 IGF1RP08069 1367 aa17.11■□□□□ 0.33
ATP7B-202ENST00000344297 SIN3AQ96ST3 1273 aa17.11■□□□□ 0.33
ATP7B-202ENST00000344297 ROCK2O75116 1388 aaKnown RBP17.11■□□□□ 0.33
ATP7B-202ENST00000344297 MEX3CQ5U5Q3 659 aaKnown RBP17.1■□□□□ 0.33
ATP7B-202ENST00000344297 MPHOSPH9Q99550 1183 aa17.1■□□□□ 0.33
ATP7B-202ENST00000344297 ANP32AP39687 249 aaKnown RBP17.09■□□□□ 0.33
ATP7B-202ENST00000344297 SNAPC4Q5SXM2 1469 aa17.09■□□□□ 0.33
ATP7B-202ENST00000344297 CC2D1BQ5T0F9 858 aaKnown RBP17.09■□□□□ 0.33
ATP7B-202ENST00000344297 NGDNQ8NEJ9 315 aaKnown RBP17.09■□□□□ 0.33
ATP7B-202ENST00000344297 RTF1Q92541 710 aaKnown RBP17.08■□□□□ 0.33
ATP7B-202ENST00000344297 SYNJ2O15056 1496 aa17.08■□□□□ 0.33
ATP7B-202ENST00000344297 TOPBP1Q92547 1522 aa17.08■□□□□ 0.32
ATP7B-202ENST00000344297 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.07■□□□□ 0.32
ATP7B-202ENST00000344297 TIMELESSQ9UNS1 1208 aa17.07■□□□□ 0.32
ATP7B-202ENST00000344297 DNMBPQ6XZF7 1577 aa17.07■□□□□ 0.32
ATP7B-202ENST00000344297 NUTM2DQ5VT03 806 aaPredicted RBP17.05■□□□□ 0.32
ATP7B-202ENST00000344297 TERF2IPQ9NYB0 399 aa17.04■□□□□ 0.32
ATP7B-202ENST00000344297 CHMP4BQ9H444 224 aaKnown RBP17.03■□□□□ 0.32
ATP7B-202ENST00000344297 FTSJ3Q8IY81 847 aaKnown RBP17.03■□□□□ 0.32
ATP7B-202ENST00000344297 TMX4Q9H1E5 349 aaPredicted RBP17.03■□□□□ 0.32
ATP7B-202ENST00000344297 NEUROD2Q15784 382 aa17.03■□□□□ 0.32
ATP7B-202ENST00000344297 ARHGAP5Q13017 1502 aa17.02■□□□□ 0.32
ATP7B-202ENST00000344297 VGFO15240 615 aaPredicted RBP17.02■□□□□ 0.32
ATP7B-202ENST00000344297 FOXD1Q16676 465 aa17.01■□□□□ 0.31
ATP7B-202ENST00000344297 GOLGA2Q08379 1002 aa17.01■□□□□ 0.31
ATP7B-202ENST00000344297 CUX1P39880 1505 aa17.01■□□□□ 0.31
ATP7B-202ENST00000344297 DNAJC5BQ9UF47 199 aa16.99■□□□□ 0.31
ATP7B-202ENST00000344297 CCDC136Q96JN2 1154 aa16.98■□□□□ 0.31
ATP7B-202ENST00000344297 CCDC144AA2RUR9 1427 aa16.98■□□□□ 0.31
ATP7B-202ENST00000344297 BICRAQ9NZM4 1560 aa16.98■□□□□ 0.31
ATP7B-202ENST00000344297 MS4A1P11836 297 aa16.97■□□□□ 0.31
ATP7B-202ENST00000344297 POGZQ7Z3K3 1410 aa16.97■□□□□ 0.31
ATP7B-202ENST00000344297 CASC1Q6TDU7 716 aa16.96■□□□□ 0.31
ATP7B-202ENST00000344297 OS9Q13438 667 aaPredicted RBP16.96■□□□□ 0.31
ATP7B-202ENST00000344297 EIF5BO60841 1220 aaKnown RBP16.96■□□□□ 0.31
ATP7B-202ENST00000344297 FKBP8Q14318 412 aa16.95■□□□□ 0.3
ATP7B-202ENST00000344297 EVA1CP58658 441 aa16.95■□□□□ 0.3
ATP7B-202ENST00000344297 POLA1P09884 1462 aaPredicted RBP16.95■□□□□ 0.3
ATP7B-202ENST00000344297 RUSC2Q8N2Y8 1516 aa16.95■□□□□ 0.3
ATP7B-202ENST00000344297 MYOM3Q5VTT5 1437 aa16.95■□□□□ 0.3
ATP7B-202ENST00000344297 RAB3GAP2Q9H2M9 1393 aa16.94■□□□□ 0.3
ATP7B-202ENST00000344297 CALD1Q05682 793 aaKnown RBP16.94■□□□□ 0.3
ATP7B-202ENST00000344297 CHMP4AQ9BY43 222 aa16.94■□□□□ 0.3
ATP7B-202ENST00000344297 ATF3P18847 181 aa16.93■□□□□ 0.3
ATP7B-202ENST00000344297 KTN1Q86UP2 1357 aaKnown RBP16.93■□□□□ 0.3
ATP7B-202ENST00000344297 ANP32BQ92688 251 aaKnown RBP16.92■□□□□ 0.3
ATP7B-202ENST00000344297 AMPHP49418 695 aa16.92■□□□□ 0.3
ATP7B-202ENST00000344297 PLEKHH2Q8IVE3 1493 aa16.89■□□□□ 0.3
ATP7B-202ENST00000344297 SYNJ1O43426 1573 aa16.89■□□□□ 0.29
ATP7B-202ENST00000344297 TOP2BQ02880 1626 aa16.88■□□□□ 0.29
ATP7B-202ENST00000344297 HSPA5P11021 654 aaKnown RBP16.87■□□□□ 0.29
ATP7B-202ENST00000344297 NUTM2FA1L443 756 aa16.87■□□□□ 0.29
ATP7B-202ENST00000344297 TRAK1Q9UPV9 953 aa16.87■□□□□ 0.29
ATP7B-202ENST00000344297 EFCAB5A4FU69 1503 aa16.87■□□□□ 0.29
ATP7B-202ENST00000344297 ZNF330Q9Y3S2 320 aaPredicted RBP16.86■□□□□ 0.29
ATP7B-202ENST00000344297 CASKIN1Q8WXD9 1431 aa16.85■□□□□ 0.29
ATP7B-202ENST00000344297 EVC2Q86UK5 1308 aa16.85■□□□□ 0.29
ATP7B-202ENST00000344297 ERICH3Q5RHP9 1530 aa16.85■□□□□ 0.29
ATP7B-202ENST00000344297 FYCO1Q9BQS8 1478 aa16.84■□□□□ 0.29
ATP7B-202ENST00000344297 HECW1Q76N89 1606 aa16.84■□□□□ 0.29
ATP7B-202ENST00000344297 MAGI1Q96QZ7 1491 aaPredicted RBP16.83■□□□□ 0.29
ATP7B-202ENST00000344297 PSME1Q06323 249 aa16.83■□□□□ 0.29
ATP7B-202ENST00000344297 KIF15Q9NS87 1388 aa16.83■□□□□ 0.28
ATP7B-202ENST00000344297 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.82■□□□□ 0.283e-6■■□□□ 13.8
ATP7B-202ENST00000344297 KIF21BO75037 1637 aa16.82■□□□□ 0.28
ATP7B-202ENST00000344297 PHF23Q9BUL5 403 aaPredicted RBP16.81■□□□□ 0.28
ATP7B-202ENST00000344297 U2AF1L5P0DN76 240 aaPredicted RBP16.8■□□□□ 0.28
ATP7B-202ENST00000344297 U2AF1Q01081 240 aaKnown RBP eCLIP16.8■□□□□ 0.28
ATP7B-202ENST00000344297 FRAT1Q92837 279 aaPredicted RBP16.8■□□□□ 0.28
ATP7B-202ENST00000344297 COG3Q96JB2 828 aa16.8■□□□□ 0.28
ATP7B-202ENST00000344297 LTV1Q96GA3 475 aaPredicted RBP16.8■□□□□ 0.28
ATP7B-202ENST00000344297 THEMISQ8N1K5 641 aaPredicted RBP16.79■□□□□ 0.28
ATP7B-202ENST00000344297 KIAA0586Q9BVV6 1533 aa16.78■□□□□ 0.28
ATP7B-202ENST00000344297 CDK11BP21127 795 aaKnown RBP16.78■□□□□ 0.28
ATP7B-202ENST00000344297 RALBP1Q15311 655 aa16.78■□□□□ 0.28
ATP7B-202ENST00000344297 G3V3G9 751 aa16.78■□□□□ 0.28
ATP7B-202ENST00000344297 LMOD3Q0VAK6 560 aa16.78■□□□□ 0.28
ATP7B-202ENST00000344297 DCAF8Q5TAQ9 597 aa16.78■□□□□ 0.28
ATP7B-202ENST00000344297 DHX57Q6P158 1386 aaKnown RBP16.77■□□□□ 0.28
ATP7B-202ENST00000344297 CUL7Q14999 1698 aa16.77■□□□□ 0.27
ATP7B-202ENST00000344297 C1orf141Q5JVX7 400 aa16.76■□□□□ 0.27
ATP7B-202ENST00000344297 ABCA10Q8WWZ4 1543 aa16.76■□□□□ 0.27
ATP7B-202ENST00000344297 MINK1Q8N4C8 1332 aaPredicted RBP16.75■□□□□ 0.27
ATP7B-202ENST00000344297 MIER1Q8N108 512 aa16.75■□□□□ 0.27
ATP7B-202ENST00000344297 UNC13AQ9UPW8 1703 aa16.75■□□□□ 0.27
ATP7B-202ENST00000344297 EHBP1L1Q8N3D4 1523 aa16.74■□□□□ 0.27
ATP7B-202ENST00000344297 STAC3Q96MF2 364 aa16.74■□□□□ 0.27
ATP7B-202ENST00000344297 DCAF8L1A6NGE4 600 aa16.74■□□□□ 0.27
ATP7B-202ENST00000344297 MSH5O43196 834 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms