RNA–Protein interactions for RNA: ENST00000344140.5

CACNB1-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene CACNB1, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-201ENST00000344140 ZNF644Q9H582 1327 aaPredicted RBP32.79■■■□□ 2.84
CACNB1-201ENST00000344140 RAB3GAP2Q9H2M9 1393 aa32.78■■■□□ 2.84
CACNB1-201ENST00000344140 WDR7Q9Y4E6 1490 aa32.78■■■□□ 2.84
CACNB1-201ENST00000344140 KCNH8Q96L42 1107 aa32.77■■■□□ 2.84
CACNB1-201ENST00000344140 DNMT1P26358 1616 aaKnown RBP32.75■■■□□ 2.83
CACNB1-201ENST00000344140 PREX2Q70Z35 1606 aa32.75■■■□□ 2.83
CACNB1-201ENST00000344140 TTC37Q6PGP7 1564 aa32.75■■■□□ 2.83
CACNB1-201ENST00000344140 HFM1A2PYH4 1435 aa32.75■■■□□ 2.83
CACNB1-201ENST00000344140 DAPK1P53355 1430 aa32.75■■■□□ 2.83
CACNB1-201ENST00000344140 ZNF777Q9ULD5 760 aaPredicted RBP32.74■■■□□ 2.83
CACNB1-201ENST00000344140 ABCC5O15440 1437 aa32.71■■■□□ 2.83
CACNB1-201ENST00000344140 AKNAQ7Z591 1439 aa32.71■■■□□ 2.83
CACNB1-201ENST00000344140 CDC42BPBQ9Y5S2 1711 aa32.67■■■□□ 2.82
CACNB1-201ENST00000344140 MYO5CQ9NQX4 1742 aa32.67■■■□□ 2.82
CACNB1-201ENST00000344140 ROCK1Q13464 1354 aa32.66■■■□□ 2.82
CACNB1-201ENST00000344140 NAIPQ13075 1403 aa32.65■■■□□ 2.82
CACNB1-201ENST00000344140 DHX57Q6P158 1386 aaKnown RBP32.65■■■□□ 2.82
CACNB1-201ENST00000344140 ARHGAP5Q13017 1502 aa32.64■■■□□ 2.82
CACNB1-201ENST00000344140 PLCH2O75038 1416 aa32.64■■■□□ 2.81
CACNB1-201ENST00000344140 CHIC2Q9UKJ5 165 aa32.63■■■□□ 2.81
CACNB1-201ENST00000344140 CLSPNQ9HAW4 1339 aa32.61■■■□□ 2.81
CACNB1-201ENST00000344140 SAMD9LQ8IVG5 1584 aa32.59■■■□□ 2.81
CACNB1-201ENST00000344140 ARAP3Q8WWN8 1544 aa32.58■■■□□ 2.81
CACNB1-201ENST00000344140 PLEKHH2Q8IVE3 1493 aa32.57■■■□□ 2.8
CACNB1-201ENST00000344140 ARHGEF5Q12774 1597 aa32.57■■■□□ 2.8
CACNB1-201ENST00000344140 RSPH4AQ5TD94 716 aa32.57■■■□□ 2.8
CACNB1-201ENST00000344140 RRP7BPQ9NSQ0 103 aa32.57■■■□□ 2.8
CACNB1-201ENST00000344140 GCC2Q8IWJ2 1684 aa32.56■■■□□ 2.8
CACNB1-201ENST00000344140 ABCA9Q8IUA7 1624 aa32.56■■■□□ 2.8
CACNB1-201ENST00000344140 EFCAB2Q5VUJ9 269 aa32.55■■■□□ 2.8
CACNB1-201ENST00000344140 DIP2BQ9P265 1576 aa32.55■■■□□ 2.8
CACNB1-201ENST00000344140 CROCC2H7BZ55 1655 aa32.55■■■□□ 2.8
CACNB1-201ENST00000344140 SHANK2Q9UPX8 1470 aa32.55■■■□□ 2.8
CACNB1-201ENST00000344140 MBD5Q9P267 1494 aa32.53■■■□□ 2.8
CACNB1-201ENST00000344140 KIAA1107Q9UPP5 1409 aa32.53■■■□□ 2.8
CACNB1-201ENST00000344140 ADGRL2O95490 1459 aa32.52■■■□□ 2.8
CACNB1-201ENST00000344140 FAM69CQ0P6D2 419 aa32.5■■■□□ 2.79
CACNB1-201ENST00000344140 HNRNPMP52272 730 aaKnown RBP eCLIP32.5■■■□□ 2.79
CACNB1-201ENST00000344140 GLI2P10070 1586 aa32.49■■■□□ 2.79
CACNB1-201ENST00000344140 CCDC141Q6ZP82 1450 aa32.49■■■□□ 2.79
CACNB1-201ENST00000344140 ADGBQ8N7X0 1667 aa32.49■■■□□ 2.79
CACNB1-201ENST00000344140 TSPY4P0CV99 314 aa32.48■■■□□ 2.79
CACNB1-201ENST00000344140 TSPY10P0CW01 314 aa32.48■■■□□ 2.79
CACNB1-201ENST00000344140 ACIN1Q9UKV3 1341 aaKnown RBP32.48■■■□□ 2.79
CACNB1-201ENST00000344140 NCOA1Q15788 1441 aa32.47■■■□□ 2.79
CACNB1-201ENST00000344140 ANKRD30AQ9BXX3 1397 aa32.47■■■□□ 2.79
CACNB1-201ENST00000344140 C9orf84Q5VXU9 1444 aa32.46■■■□□ 2.79
CACNB1-201ENST00000344140 KIF13AQ9H1H9 1805 aa32.45■■■□□ 2.79
CACNB1-201ENST00000344140 SYCP2Q9BX26 1530 aa32.45■■■□□ 2.79
CACNB1-201ENST00000344140 TRHP20396 242 aaPredicted RBP32.42■■■□□ 2.78
CACNB1-201ENST00000344140 CD109Q6YHK3 1445 aa32.4■■■□□ 2.78
CACNB1-201ENST00000344140 MAP3K4Q9Y6R4 1608 aa32.39■■■□□ 2.78
CACNB1-201ENST00000344140 ABCC1P33527 1531 aa32.39■■■□□ 2.78
CACNB1-201ENST00000344140 FANCAO15360 1455 aa32.38■■■□□ 2.77
CACNB1-201ENST00000344140 ARHGEF12Q9NZN5 1544 aa32.34■■■□□ 2.77
CACNB1-201ENST00000344140 MAST1Q9Y2H9 1570 aa32.34■■■□□ 2.77
CACNB1-201ENST00000344140 KDM6BO15054 1643 aa32.33■■■□□ 2.77
CACNB1-201ENST00000344140 TSPOAP1O95153 1857 aa32.31■■■□□ 2.76
CACNB1-201ENST00000344140 KIF15Q9NS87 1388 aa32.27■■■□□ 2.76
CACNB1-201ENST00000344140 ANKRD50Q9ULJ7 1429 aa32.27■■■□□ 2.76
CACNB1-201ENST00000344140 TRIM52Q96A61 297 aa32.27■■■□□ 2.76
CACNB1-201ENST00000344140 CFAP74Q9C0B2 1584 aa32.24■■■□□ 2.75
CACNB1-201ENST00000344140 TRAPPC8Q9Y2L5 1435 aa32.24■■■□□ 2.75
CACNB1-201ENST00000344140 ADGRL1O94910 1474 aa32.23■■■□□ 2.75
CACNB1-201ENST00000344140 TEX14Q8IWB6 1497 aa32.21■■■□□ 2.75
CACNB1-201ENST00000344140 PLXNC1O60486 1568 aa32.21■■■□□ 2.75
CACNB1-201ENST00000344140 PPRC1Q5VV67 1664 aaKnown RBP32.21■■■□□ 2.75
CACNB1-201ENST00000344140 SCAPERQ9BY12 1400 aa32.19■■■□□ 2.74
CACNB1-201ENST00000344140 RTEL1-TNFRSF6BF6WH68 1400 aa32.17■■■□□ 2.74
CACNB1-201ENST00000344140 SPAG9O60271 1321 aaKnown RBP32.15■■■□□ 2.74
CACNB1-201ENST00000344140 NEO1Q92859 1461 aa32.15■■■□□ 2.74
CACNB1-201ENST00000344140 AFAP1Q8N556 730 aa32.14■■■□□ 2.74
CACNB1-201ENST00000344140 MPHOSPH9Q99550 1183 aa32.14■■■□□ 2.74
CACNB1-201ENST00000344140 DUOX2Q9NRD8 1548 aa32.1■■■□□ 2.73
CACNB1-201ENST00000344140 ZFYVE16Q7Z3T8 1539 aa32.08■■■□□ 2.73
CACNB1-201ENST00000344140 DENND4BO75064 1496 aaPredicted RBP32.07■■■□□ 2.72
CACNB1-201ENST00000344140 ZNF518AQ6AHZ1 1483 aa32.07■■■□□ 2.72
CACNB1-201ENST00000344140 SLC4A1APQ9BWU0 796 aaKnown RBP32.05■■■□□ 2.72
CACNB1-201ENST00000344140 ERBINQ96RT1 1412 aa32.05■■■□□ 2.72
CACNB1-201ENST00000344140 PZPP20742 1482 aa32.04■■■□□ 2.72
CACNB1-201ENST00000344140 INO80Q9ULG1 1556 aaPredicted RBP32.04■■■□□ 2.72
CACNB1-201ENST00000344140 TIMELESSQ9UNS1 1208 aa32.03■■■□□ 2.72
CACNB1-201ENST00000344140 ATP7AQ04656 1500 aa32.03■■■□□ 2.72
CACNB1-201ENST00000344140 SIN3AQ96ST3 1273 aa32.03■■■□□ 2.72
CACNB1-201ENST00000344140 POGZQ7Z3K3 1410 aa32.02■■■□□ 2.72
CACNB1-201ENST00000344140 KDM5DQ9BY66 1539 aa32.02■■■□□ 2.72
CACNB1-201ENST00000344140 NUP155O75694 1391 aa32.01■■■□□ 2.71
CACNB1-201ENST00000344140 NEUROD1Q13562 356 aa31.99■■■□□ 2.71
CACNB1-201ENST00000344140 KDM5CP41229 1560 aa31.97■■■□□ 2.71
CACNB1-201ENST00000344140 UNC13BO14795 1591 aa31.93■■■□□ 2.7
CACNB1-201ENST00000344140 MYT1LQ9UL68 1186 aa31.93■■■□□ 2.7
CACNB1-201ENST00000344140 MLH3Q9UHC1 1453 aa31.92■■■□□ 2.7
CACNB1-201ENST00000344140 ANKRD30BQ9BXX2 1392 aa31.91■■■□□ 2.7
CACNB1-201ENST00000344140 KIDINS220Q9ULH0 1771 aa31.89■■■□□ 2.69
CACNB1-201ENST00000344140 RAPGEF3O95398 923 aa31.88■■■□□ 2.69
CACNB1-201ENST00000344140 PKD2Q13563 968 aa31.87■■■□□ 2.69
CACNB1-201ENST00000344140 FOXD1Q16676 465 aa31.87■■■□□ 2.69
CACNB1-201ENST00000344140 RICTORQ6R327 1708 aa31.87■■■□□ 2.69
CACNB1-201ENST00000344140 MAGI2Q86UL8 1455 aa31.86■■■□□ 2.69
CACNB1-201ENST00000344140 HECW2Q9P2P5 1572 aa31.86■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms