RNA–Protein interactions for RNA: ENST00000343529.9

RELN-201, Transcript of reelin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RELN, Length 11,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELN-201ENST00000343529 KLHL34Q8N239 644 aa13.15□□□□□ -0.3
RELN-201ENST00000343529 DRC7Q8IY82 874 aa13.15□□□□□ -0.3
RELN-201ENST00000343529 MARCH6O60337 910 aa13.14□□□□□ -0.31
RELN-201ENST00000343529 HSP90AB1P08238 724 aaKnown RBP13.14□□□□□ -0.31
RELN-201ENST00000343529 RASSF8Q8NHQ8 419 aa13.14□□□□□ -0.31
RELN-201ENST00000343529 EVA1CP58658 441 aa13.14□□□□□ -0.31
RELN-201ENST00000343529 ANO8Q9HCE9 1232 aaPredicted RBP13.14□□□□□ -0.31
RELN-201ENST00000343529 HDAC5Q9UQL6 1122 aa13.13□□□□□ -0.31
RELN-201ENST00000343529 GPATCH3Q96I76 525 aa13.11□□□□□ -0.31
RELN-201ENST00000343529 PDE4CQ08493 712 aa13.1□□□□□ -0.31
RELN-201ENST00000343529 HTATSF1O43719 755 aaKnown RBP13.1□□□□□ -0.31
RELN-201ENST00000343529 RRP7BPQ9NSQ0 103 aa13.1□□□□□ -0.31
RELN-201ENST00000343529 AMOTL1Q8IY63 956 aa13.1□□□□□ -0.31
RELN-201ENST00000343529 SPAG9O60271 1321 aaKnown RBP13.1□□□□□ -0.31
RELN-201ENST00000343529 SF3B2Q13435 895 aaKnown RBP13.09□□□□□ -0.31
RELN-201ENST00000343529 NOL10Q9BSC4 688 aaKnown RBP13.09□□□□□ -0.31
RELN-201ENST00000343529 USP35Q9P2H5 1018 aa13.08□□□□□ -0.32
RELN-201ENST00000343529 HDGFL2Q7Z4V5 671 aaPredicted RBP13.07□□□□□ -0.32
RELN-201ENST00000343529 FRAT1Q92837 279 aaPredicted RBP13.07□□□□□ -0.32
RELN-201ENST00000343529 CARD11Q9BXL7 1154 aa13.07□□□□□ -0.32
RELN-201ENST00000343529 TPM4P67936 248 aa13.07□□□□□ -0.32
RELN-201ENST00000343529 CALD1Q05682 793 aaKnown RBP13.07□□□□□ -0.32
RELN-201ENST00000343529 CLIP1P30622 1438 aa13.06□□□□□ -0.32
RELN-201ENST00000343529 CCAR1Q8IX12 1150 aaKnown RBP13.05□□□□□ -0.32
RELN-201ENST00000343529 WASHC2AQ641Q2 1341 aa13.04□□□□□ -0.32
RELN-201ENST00000343529 WWC1Q8IX03 1113 aa13.03□□□□□ -0.32
RELN-201ENST00000343529 RB1CC1Q8TDY2 1594 aa13.01□□□□□ -0.33
RELN-201ENST00000343529 FBXO3Q9UK99 471 aa13.01□□□□□ -0.33
RELN-201ENST00000343529 GGT6Q6P531 493 aa13.01□□□□□ -0.33
RELN-201ENST00000343529 SAFB2Q14151 953 aaKnown RBP eCLIP13.01□□□□□ -0.33
RELN-201ENST00000343529 STK26Q9P289 416 aa13□□□□□ -0.33
RELN-201ENST00000343529 RAD21O60216 631 aa13□□□□□ -0.33
RELN-201ENST00000343529 WWC2Q6AWC2 1192 aa13□□□□□ -0.33
RELN-201ENST00000343529 CCDC43Q96MW1 224 aaKnown RBP12.99□□□□□ -0.33
RELN-201ENST00000343529 R3HCC1Q9Y3T6 440 aaKnown RBP12.99□□□□□ -0.33
RELN-201ENST00000343529 NGDNQ8NEJ9 315 aaKnown RBP12.99□□□□□ -0.33
RELN-201ENST00000343529 GOLGA6L1Q8N7Z2 621 aa12.98□□□□□ -0.33
RELN-201ENST00000343529 CREBRFQ8IUR6 639 aa12.98□□□□□ -0.33
RELN-201ENST00000343529 TOMM22Q9NS69 142 aa12.98□□□□□ -0.33
RELN-201ENST00000343529 TMF1P82094 1093 aa12.97□□□□□ -0.33
RELN-201ENST00000343529 STK31Q9BXU1 1019 aa12.97□□□□□ -0.33
RELN-201ENST00000343529 HSCBQ8IWL3 235 aa12.97□□□□□ -0.33
RELN-201ENST00000343529 HSP90B1P14625 803 aaKnown RBP12.97□□□□□ -0.33
RELN-201ENST00000343529 ERICH6BQ5W0A0 696 aa12.97□□□□□ -0.33
RELN-201ENST00000343529 IPO8O15397 1037 aaKnown RBP12.97□□□□□ -0.33
RELN-201ENST00000343529 VPS37DQ86XT2 251 aa12.97□□□□□ -0.33
RELN-201ENST00000343529 AMER1Q5JTC6 1135 aaPredicted RBP12.97□□□□□ -0.33
RELN-201ENST00000343529 TSR1Q2NL82 804 aaKnown RBP12.96□□□□□ -0.33
RELN-201ENST00000343529 KIF3AQ9Y496 699 aa12.96□□□□□ -0.34
RELN-201ENST00000343529 PAF1Q8N7H5 531 aa12.95□□□□□ -0.34
RELN-201ENST00000343529 MORC1Q86VD1 984 aa12.95□□□□□ -0.34
RELN-201ENST00000343529 AKAP17AQ02040 695 aaKnown RBP12.95□□□□□ -0.34
RELN-201ENST00000343529 PPP4R2Q9NY27 417 aa12.95□□□□□ -0.34
RELN-201ENST00000343529 LRRFIP1Q32MZ4 808 aaKnown RBP12.95□□□□□ -0.34
RELN-201ENST00000343529 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.95□□□□□ -0.344e-8■■■■■ 80.3
RELN-201ENST00000343529 TPM2P07951 284 aa12.94□□□□□ -0.34
RELN-201ENST00000343529 AMPHP49418 695 aa12.94□□□□□ -0.34
RELN-201ENST00000343529 FBXW7Q969H0 707 aa12.94□□□□□ -0.34
RELN-201ENST00000343529 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.93□□□□□ -0.34
RELN-201ENST00000343529 MSNP26038 577 aaKnown RBP12.93□□□□□ -0.34
RELN-201ENST00000343529 PPP1R1BQ9UD71 204 aaPredicted RBP12.93□□□□□ -0.34
RELN-201ENST00000343529 PES1O00541 588 aaKnown RBP12.93□□□□□ -0.34
RELN-201ENST00000343529 SYTL4Q96C24 671 aaPredicted RBP12.92□□□□□ -0.34
RELN-201ENST00000343529 TPM3P06753 285 aa12.92□□□□□ -0.34
RELN-201ENST00000343529 CC2D1BQ5T0F9 858 aaKnown RBP12.92□□□□□ -0.34
RELN-201ENST00000343529 EIF4G1Q04637 1599 aaKnown RBP12.92□□□□□ -0.34
RELN-201ENST00000343529 TPD52L1Q16890 204 aaPredicted RBP12.92□□□□□ -0.34
RELN-201ENST00000343529 ZCCHC6Q5VYS8 1495 aaKnown RBP12.91□□□□□ -0.34
RELN-201ENST00000343529 CSPP1Q1MSJ5 1256 aa12.89□□□□□ -0.35
RELN-201ENST00000343529 C1orf141Q5JVX7 400 aa12.89□□□□□ -0.35
RELN-201ENST00000343529 APBB1O00213 710 aa12.89□□□□□ -0.35
RELN-201ENST00000343529 ODF2Q5BJF6 829 aa12.89□□□□□ -0.35
RELN-201ENST00000343529 RGS3P49796 1198 aa12.89□□□□□ -0.35
RELN-201ENST00000343529 SYAP1Q96A49 352 aaPredicted RBP12.89□□□□□ -0.35
RELN-201ENST00000343529 CHMP4CQ96CF2 233 aa12.89□□□□□ -0.35
RELN-201ENST00000343529 RBM33Q96EV2 1170 aaKnown RBP12.88□□□□□ -0.35
RELN-201ENST00000343529 TRIM6-TRIM34B2RNG4 842 aa12.87□□□□□ -0.35
RELN-201ENST00000343529 CCNB3Q8WWL7 1395 aa12.87□□□□□ -0.35
RELN-201ENST00000343529 SYNE3Q6ZMZ3 975 aa12.87□□□□□ -0.35
RELN-201ENST00000343529 IRX6P78412 446 aaPredicted RBP12.87□□□□□ -0.35
RELN-201ENST00000343529 HMMRO75330 724 aa12.86□□□□□ -0.35
RELN-201ENST00000343529 TERF2IPQ9NYB0 399 aa12.85□□□□□ -0.35
RELN-201ENST00000343529 DCAF11Q8TEB1 546 aa12.85□□□□□ -0.35
RELN-201ENST00000343529 NAP1L5Q96NT1 182 aaPredicted RBP12.85□□□□□ -0.35
RELN-201ENST00000343529 DHX16O60231 1041 aaKnown RBP12.85□□□□□ -0.35
RELN-201ENST00000343529 PTMSP20962 102 aa12.85□□□□□ -0.35
RELN-201ENST00000343529 SMC4Q9NTJ3 1288 aa12.85□□□□□ -0.35
RELN-201ENST00000343529 HIRIP3Q9BW71 556 aaPredicted RBP12.85□□□□□ -0.35
RELN-201ENST00000343529 TTC5Q8N0Z6 440 aa12.84□□□□□ -0.35
RELN-201ENST00000343529 SF3A1Q15459 793 aaKnown RBP12.84□□□□□ -0.35
RELN-201ENST00000343529 CARMIL2Q6F5E8 1435 aa12.84□□□□□ -0.35
RELN-201ENST00000343529 WDHD1O75717 1129 aaPredicted RBP12.83□□□□□ -0.35
RELN-201ENST00000343529 SAMD1Q6SPF0 538 aaPredicted RBP12.83□□□□□ -0.36
RELN-201ENST00000343529 EIF3AQ14152 1382 aaKnown RBP12.83□□□□□ -0.36
RELN-201ENST00000343529 TPM1P09493 284 aa12.83□□□□□ -0.36
RELN-201ENST00000343529 CCDC70Q6NSX1 233 aa12.83□□□□□ -0.36
RELN-201ENST00000343529 CCDC47Q96A33 483 aaKnown RBP12.83□□□□□ -0.36
RELN-201ENST00000343529 LTV1Q96GA3 475 aaPredicted RBP12.82□□□□□ -0.36
RELN-201ENST00000343529 BAZ1BQ9UIG0 1483 aaKnown RBP12.82□□□□□ -0.36
RELN-201ENST00000343529 NEXNQ0ZGT2 675 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms