RNA–Protein interactions for RNA: ENST00000342725.9

EBF4-201, Transcript of early B cell factor 4, humanhuman

TSL 5

Gene EBF4, Length 2,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4-201ENST00000342725 MIA2Q96PC5 1412 aa27.19■■□□□ 1.94
EBF4-201ENST00000342725 HSPA5P11021 654 aaKnown RBP27.18■■□□□ 1.94
EBF4-201ENST00000342725 WASHC2AQ641Q2 1341 aa27.17■■□□□ 1.94
EBF4-201ENST00000342725 CDK13Q14004 1512 aaKnown RBP27.16■■□□□ 1.94
EBF4-201ENST00000342725 KIAA0556O60303 1618 aa27.15■■□□□ 1.94
EBF4-201ENST00000342725 PRG4Q92954 1404 aaPredicted RBP27.14■■□□□ 1.93
EBF4-201ENST00000342725 MPHOSPH9Q99550 1183 aa27.12■■□□□ 1.93
EBF4-201ENST00000342725 ANP32EQ9BTT0 268 aa27.12■■□□□ 1.93
EBF4-201ENST00000342725 PLB1Q6P1J6 1458 aa27.11■■□□□ 1.93
EBF4-201ENST00000342725 EIF4G2P78344 907 aaKnown RBP eCLIP27.1■■□□□ 1.93
EBF4-201ENST00000342725 HNRNPUQ00839 825 aaKnown RBP eCLIP27.1■■□□□ 1.93
EBF4-201ENST00000342725 CARMIL2Q6F5E8 1435 aa27.07■■□□□ 1.92
EBF4-201ENST00000342725 L3MBTL2Q969R5 705 aa27.05■■□□□ 1.92
EBF4-201ENST00000342725 CNTLNQ9NXG0 1405 aa27.05■■□□□ 1.92
EBF4-201ENST00000342725 ERCC6L2Q5T890 1561 aa27.05■■□□□ 1.92
EBF4-201ENST00000342725 RBM19Q9Y4C8 960 aaKnown RBP27.03■■□□□ 1.92
EBF4-201ENST00000342725 ROCK1Q13464 1354 aa27.02■■□□□ 1.92
EBF4-201ENST00000342725 FOXD1Q16676 465 aa27.01■■□□□ 1.91
EBF4-201ENST00000342725 DAPK1P53355 1430 aa27.01■■□□□ 1.91
EBF4-201ENST00000342725 NCOA1Q15788 1441 aa26.99■■□□□ 1.91
EBF4-201ENST00000342725 RPRD2Q5VT52 1461 aaKnown RBP26.98■■□□□ 1.91
EBF4-201ENST00000342725 ANKRD30BQ9BXX2 1392 aa26.97■■□□□ 1.91
EBF4-201ENST00000342725 DNMT1P26358 1616 aaKnown RBP26.97■■□□□ 1.91
EBF4-201ENST00000342725 CCDC7Q96M83 1385 aa26.96■■□□□ 1.91
EBF4-201ENST00000342725 NUP153P49790 1475 aaKnown RBP26.95■■□□□ 1.9
EBF4-201ENST00000342725 ABCC5O15440 1437 aa26.95■■□□□ 1.9
EBF4-201ENST00000342725 PTPRGP23470 1445 aa26.95■■□□□ 1.9
EBF4-201ENST00000342725 TEX14Q8IWB6 1497 aa26.94■■□□□ 1.9
EBF4-201ENST00000342725 C11orf95C9JLR9 678 aaPredicted RBP26.93■■□□□ 1.9
EBF4-201ENST00000342725 CCDC184Q52MB2 194 aa26.9■■□□□ 1.9
EBF4-201ENST00000342725 NBPF8Q3BBV2 869 aa26.89■■□□□ 1.9
EBF4-201ENST00000342725 PRKRIP1Q9H875 184 aaPredicted RBP26.89■■□□□ 1.9
EBF4-201ENST00000342725 OSCARQ8IYS5 282 aa26.89■■□□□ 1.9
EBF4-201ENST00000342725 RAPGEF6Q8TEU7 1601 aa26.89■■□□□ 1.89
EBF4-201ENST00000342725 ZNF644Q9H582 1327 aaPredicted RBP26.87■■□□□ 1.89
EBF4-201ENST00000342725 IRX6P78412 446 aaPredicted RBP26.87■■□□□ 1.89
EBF4-201ENST00000342725 SLC4A1APQ9BWU0 796 aaKnown RBP26.85■■□□□ 1.89
EBF4-201ENST00000342725 SPATA31E1Q6ZUB1 1445 aa26.84■■□□□ 1.89
EBF4-201ENST00000342725 POLR1AO95602 1720 aaPredicted RBP26.83■■□□□ 1.88
EBF4-201ENST00000342725 CDK11AQ9UQ88 783 aaPredicted RBP26.81■■□□□ 1.88
EBF4-201ENST00000342725 ERICH6BQ5W0A0 696 aa26.81■■□□□ 1.88
EBF4-201ENST00000342725 CLASP1Q7Z460 1538 aa26.8■■□□□ 1.88
EBF4-201ENST00000342725 KIF7Q2M1P5 1343 aa26.8■■□□□ 1.88
EBF4-201ENST00000342725 MRS2Q9HD23 443 aa26.8■■□□□ 1.88
EBF4-201ENST00000342725 FAM9BQ8IZU0 186 aa26.79■■□□□ 1.88
EBF4-201ENST00000342725 PZPP20742 1482 aa26.77■■□□□ 1.88
EBF4-201ENST00000342725 ZBED9Q6R2W3 1325 aa26.76■■□□□ 1.87
EBF4-201ENST00000342725 SHROOM2Q13796 1616 aa26.76■■□□□ 1.87
EBF4-201ENST00000342725 CAMSAP2Q08AD1 1489 aa26.75■■□□□ 1.87
EBF4-201ENST00000342725 ZNF777Q9ULD5 760 aaPredicted RBP26.74■■□□□ 1.87
EBF4-201ENST00000342725 TROQ12816 1431 aaPredicted RBP26.74■■□□□ 1.87
EBF4-201ENST00000342725 ATP10BO94823 1461 aa26.74■■□□□ 1.87
EBF4-201ENST00000342725 PLEKHD1A6NEE1 506 aa26.73■■□□□ 1.87
EBF4-201ENST00000342725 ADGBQ8N7X0 1667 aa26.73■■□□□ 1.87
EBF4-201ENST00000342725 ITSN2Q9NZM3 1697 aa26.72■■□□□ 1.87
EBF4-201ENST00000342725 PPP4R2Q9NY27 417 aa26.72■■□□□ 1.87
EBF4-201ENST00000342725 ABCA8O94911 1581 aa26.71■■□□□ 1.87
EBF4-201ENST00000342725 MBD5Q9P267 1494 aa26.7■■□□□ 1.87
EBF4-201ENST00000342725 CFDP1Q9UEE9 299 aaPredicted RBP26.7■■□□□ 1.86
EBF4-201ENST00000342725 KIAA1107Q9UPP5 1409 aa26.67■■□□□ 1.86
EBF4-201ENST00000342725 GPATCH8Q9UKJ3 1502 aaKnown RBP26.67■■□□□ 1.86
EBF4-201ENST00000342725 ADGRL2O95490 1459 aa26.67■■□□□ 1.86
EBF4-201ENST00000342725 CROCC2H7BZ55 1655 aa26.66■■□□□ 1.86
EBF4-201ENST00000342725 FANCIQ9NVI1 1328 aa26.65■■□□□ 1.86
EBF4-201ENST00000342725 ADCY10Q96PN6 1610 aa26.65■■□□□ 1.86
EBF4-201ENST00000342725 KIF14Q15058 1648 aa26.64■■□□□ 1.85
EBF4-201ENST00000342725 MSH5O43196 834 aa26.64■■□□□ 1.85
EBF4-201ENST00000342725 DHX29Q7Z478 1369 aaKnown RBP26.61■■□□□ 1.85
EBF4-201ENST00000342725 USP47Q96K76 1375 aa26.61■■□□□ 1.85
EBF4-201ENST00000342725 BCORL1Q5H9F3 1711 aa26.59■■□□□ 1.85
EBF4-201ENST00000342725 ANKRD30AQ9BXX3 1397 aa26.59■■□□□ 1.85
EBF4-201ENST00000342725 PKD2Q13563 968 aa26.58■■□□□ 1.85
EBF4-201ENST00000342725 KDM5CP41229 1560 aa26.56■■□□□ 1.84
EBF4-201ENST00000342725 ZNF326Q5BKZ1 582 aaKnown RBP26.55■■□□□ 1.84
EBF4-201ENST00000342725 ANKRD50Q9ULJ7 1429 aa26.54■■□□□ 1.84
EBF4-201ENST00000342725 ARID4BQ4LE39 1312 aaPredicted RBP26.53■■□□□ 1.84
EBF4-201ENST00000342725 B4GALNT3Q6L9W6 998 aa26.52■■□□□ 1.84
EBF4-201ENST00000342725 SMG6Q86US8 1419 aaKnown RBP26.51■■□□□ 1.83
EBF4-201ENST00000342725 ABCC2Q92887 1545 aa26.51■■□□□ 1.83
EBF4-201ENST00000342725 CYB5RLQ6IPT4 315 aa26.51■■□□□ 1.83
EBF4-201ENST00000342725 POLR3GLQ9BT43 218 aa26.51■■□□□ 1.83
EBF4-201ENST00000342725 UHRF1BP1Q6BDS2 1440 aa26.5■■□□□ 1.83
EBF4-201ENST00000342725 RALGAPBQ86X10 1494 aa26.48■■□□□ 1.83
EBF4-201ENST00000342725 SHANK2Q9UPX8 1470 aa26.47■■□□□ 1.83
EBF4-201ENST00000342725 CDC42BPAQ5VT25 1732 aa26.46■■□□□ 1.83
EBF4-201ENST00000342725 CNGB1Q14028 1251 aaPredicted RBP26.46■■□□□ 1.83
EBF4-201ENST00000342725 ROCK2O75116 1388 aaKnown RBP26.44■■□□□ 1.82
EBF4-201ENST00000342725 NUP155O75694 1391 aa26.44■■□□□ 1.82
EBF4-201ENST00000342725 C9orf84Q5VXU9 1444 aa26.44■■□□□ 1.82
EBF4-201ENST00000342725 ARHGEF12Q9NZN5 1544 aa26.44■■□□□ 1.82
EBF4-201ENST00000342725 NUDCQ9Y266 331 aa26.43■■□□□ 1.82
EBF4-201ENST00000342725 ABCC10Q5T3U5 1492 aa26.42■■□□□ 1.82
EBF4-201ENST00000342725 HNRNPMP52272 730 aaKnown RBP eCLIP26.42■■□□□ 1.82
EBF4-201ENST00000342725 KDM5DQ9BY66 1539 aa26.41■■□□□ 1.82
EBF4-201ENST00000342725 ERICH6Q7L0X2 663 aa26.4■■□□□ 1.82
EBF4-201ENST00000342725 CARD11Q9BXL7 1154 aa26.39■■□□□ 1.82
EBF4-201ENST00000342725 ZCCHC11Q5TAX3 1644 aaKnown RBP26.38■■□□□ 1.81
EBF4-201ENST00000342725 RNF123Q5XPI4 1314 aa26.37■■□□□ 1.81
EBF4-201ENST00000342725 PNISRQ8TF01 805 aaKnown RBP26.37■■□□□ 1.81
EBF4-201ENST00000342725 KIF15Q9NS87 1388 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms