RNA–Protein interactions for RNA: ENST00000342711.5

CDC42BPG-201, Transcript of CDC42 binding protein kinase gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPG, Length 5,742 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPG-201ENST00000342711 AMER1Q5JTC6 1135 aaPredicted RBP20.97■□□□□ 0.95
CDC42BPG-201ENST00000342711 SRPK2P78362 688 aaKnown RBP20.96■□□□□ 0.95
CDC42BPG-201ENST00000342711 GZF1Q9H116 711 aaPredicted RBP20.96■□□□□ 0.95
CDC42BPG-201ENST00000342711 TIMELESSQ9UNS1 1208 aa20.95■□□□□ 0.95
CDC42BPG-201ENST00000342711 CFAP44Q96MT7 982 aa20.94■□□□□ 0.94
CDC42BPG-201ENST00000342711 SLKQ9H2G2 1235 aaPredicted RBP20.93■□□□□ 0.94
CDC42BPG-201ENST00000342711 SAFB2Q14151 953 aaKnown RBP eCLIP20.93■□□□□ 0.94
CDC42BPG-201ENST00000342711 GBP4Q96PP9 640 aa20.93■□□□□ 0.94
CDC42BPG-201ENST00000342711 KTN1Q86UP2 1357 aaKnown RBP20.93■□□□□ 0.94
CDC42BPG-201ENST00000342711 RCAN3Q9UKA8 241 aa20.92■□□□□ 0.94
CDC42BPG-201ENST00000342711 SETD5Q9C0A6 1442 aa20.89■□□□□ 0.94
CDC42BPG-201ENST00000342711 ARID3AQ99856 593 aa20.89■□□□□ 0.94
CDC42BPG-201ENST00000342711 IPO8O15397 1037 aaKnown RBP20.89■□□□□ 0.93
CDC42BPG-201ENST00000342711 RTF1Q92541 710 aaKnown RBP20.88■□□□□ 0.93
CDC42BPG-201ENST00000342711 FHAD1B1AJZ9 1412 aa20.88■□□□□ 0.93
CDC42BPG-201ENST00000342711 KANK1Q14678 1352 aa20.88■□□□□ 0.93
CDC42BPG-201ENST00000342711 GNL2Q13823 731 aaKnown RBP20.88■□□□□ 0.93
CDC42BPG-201ENST00000342711 SMARCA2P51531 1590 aa20.88■□□□□ 0.93
CDC42BPG-201ENST00000342711 TCERG1O14776 1098 aaKnown RBP20.88■□□□□ 0.93
CDC42BPG-201ENST00000342711 PTMSP20962 102 aa20.88■□□□□ 0.93
CDC42BPG-201ENST00000342711 ITPRIPQ8IWB1 547 aa20.87■□□□□ 0.93
CDC42BPG-201ENST00000342711 KIAA1211Q6ZU35 1233 aa20.87■□□□□ 0.93
CDC42BPG-201ENST00000342711 RWDD1Q9H446 243 aaPredicted RBP20.87■□□□□ 0.93
CDC42BPG-201ENST00000342711 KIAA2012Q0VF49 1180 aa20.86■□□□□ 0.93
CDC42BPG-201ENST00000342711 FOXD1Q16676 465 aa20.86■□□□□ 0.93
CDC42BPG-201ENST00000342711 CLSTN1O94985 981 aa20.85■□□□□ 0.93
CDC42BPG-201ENST00000342711 MROH2BQ7Z745 1585 aa20.84■□□□□ 0.93
CDC42BPG-201ENST00000342711 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.84■□□□□ 0.93
CDC42BPG-201ENST00000342711 TSHZ2Q9NRE2 1034 aa20.83■□□□□ 0.92
CDC42BPG-201ENST00000342711 PKD2Q13563 968 aa20.82■□□□□ 0.92
CDC42BPG-201ENST00000342711 EIF4G1Q04637 1599 aaKnown RBP20.81■□□□□ 0.92
CDC42BPG-201ENST00000342711 MFAP1P55081 439 aaKnown RBP20.81■□□□□ 0.92
CDC42BPG-201ENST00000342711 U2AF1L5P0DN76 240 aaPredicted RBP20.81■□□□□ 0.92
CDC42BPG-201ENST00000342711 U2AF1Q01081 240 aaKnown RBP eCLIP20.81■□□□□ 0.92
CDC42BPG-201ENST00000342711 STK26Q9P289 416 aa20.8■□□□□ 0.92
CDC42BPG-201ENST00000342711 ISY1Q9ULR0 285 aaKnown RBP20.8■□□□□ 0.92
CDC42BPG-201ENST00000342711 GOLGA6L3A6NEY3 463 aa20.79■□□□□ 0.92
CDC42BPG-201ENST00000342711 RALBP1Q15311 655 aa20.79■□□□□ 0.92
CDC42BPG-201ENST00000342711 ERCC6Q03468 1493 aa20.79■□□□□ 0.92
CDC42BPG-201ENST00000342711 IPO9Q96P70 1041 aaKnown RBP20.79■□□□□ 0.92
CDC42BPG-201ENST00000342711 HDGFL2Q7Z4V5 671 aaPredicted RBP20.78■□□□□ 0.92
CDC42BPG-201ENST00000342711 ARHGAP35Q9NRY4 1499 aa20.77■□□□□ 0.92
CDC42BPG-201ENST00000342711 ROCK2O75116 1388 aaKnown RBP20.77■□□□□ 0.92
CDC42BPG-201ENST00000342711 PMFBP1Q8TBY8 1022 aa20.77■□□□□ 0.92
CDC42BPG-201ENST00000342711 SYAP1Q96A49 352 aaPredicted RBP20.77■□□□□ 0.92
CDC42BPG-201ENST00000342711 MLECQ14165 292 aa20.76■□□□□ 0.91
CDC42BPG-201ENST00000342711 SOGA1O94964 1423 aa20.75■□□□□ 0.91
CDC42BPG-201ENST00000342711 CCDC88BA6NC98 1476 aa20.75■□□□□ 0.91
CDC42BPG-201ENST00000342711 HDGFP51858 240 aaKnown RBP20.75■□□□□ 0.91
CDC42BPG-201ENST00000342711 CARMIL1Q5VZK9 1371 aa20.75■□□□□ 0.91
CDC42BPG-201ENST00000342711 CALD1Q05682 793 aaKnown RBP20.74■□□□□ 0.91
CDC42BPG-201ENST00000342711 NCBP3Q53F19 620 aaKnown RBP20.73■□□□□ 0.91
CDC42BPG-201ENST00000342711 HTATSF1O43719 755 aaKnown RBP20.73■□□□□ 0.91
CDC42BPG-201ENST00000342711 KANK4Q5T7N3 995 aaPredicted RBP20.73■□□□□ 0.91
CDC42BPG-201ENST00000342711 FOXD4L1Q9NU39 408 aa20.72■□□□□ 0.91
CDC42BPG-201ENST00000342711 SMC4Q9NTJ3 1288 aa20.7■□□□□ 0.9
CDC42BPG-201ENST00000342711 RAB3GAP2Q9H2M9 1393 aa20.7■□□□□ 0.9
CDC42BPG-201ENST00000342711 MPHOSPH9Q99550 1183 aa20.7■□□□□ 0.9
CDC42BPG-201ENST00000342711 GGT6Q6P531 493 aa20.69■□□□□ 0.9
CDC42BPG-201ENST00000342711 TOP2AP11388 1531 aaKnown RBP20.68■□□□□ 0.9
CDC42BPG-201ENST00000342711 CUX2O14529 1486 aa20.68■□□□□ 0.9
CDC42BPG-201ENST00000342711 VPS8Q8N3P4 1428 aa20.68■□□□□ 0.9
CDC42BPG-201ENST00000342711 TRIM6-TRIM34B2RNG4 842 aa20.68■□□□□ 0.9
CDC42BPG-201ENST00000342711 HSP90B1P14625 803 aaKnown RBP20.68■□□□□ 0.9
CDC42BPG-201ENST00000342711 TPM4P67936 248 aa20.67■□□□□ 0.9
CDC42BPG-201ENST00000342711 CCDC146Q8IYE0 955 aa20.67■□□□□ 0.9
CDC42BPG-201ENST00000342711 CLUAP1Q96AJ1 413 aa20.67■□□□□ 0.9
CDC42BPG-201ENST00000342711 NOL8Q76FK4 1167 aaKnown RBP20.67■□□□□ 0.9
CDC42BPG-201ENST00000342711 NOC3LQ8WTT2 800 aaKnown RBP20.67■□□□□ 0.9
CDC42BPG-201ENST00000342711 ZNF330Q9Y3S2 320 aaPredicted RBP20.66■□□□□ 0.9
CDC42BPG-201ENST00000342711 PAK3O75914 559 aaPredicted RBP20.65■□□□□ 0.9
CDC42BPG-201ENST00000342711 STK31Q9BXU1 1019 aa20.64■□□□□ 0.89
CDC42BPG-201ENST00000342711 TNNT3P45378 269 aaPredicted RBP20.62■□□□□ 0.89
CDC42BPG-201ENST00000342711 NUP155O75694 1391 aa20.62■□□□□ 0.89
CDC42BPG-201ENST00000342711 CENPJQ9HC77 1338 aaPredicted RBP20.61■□□□□ 0.89
CDC42BPG-201ENST00000342711 GPATCH3Q96I76 525 aa20.61■□□□□ 0.89
CDC42BPG-201ENST00000342711 PDS5BQ9NTI5 1447 aa20.61■□□□□ 0.89
CDC42BPG-201ENST00000342711 HMMRO75330 724 aa20.6■□□□□ 0.89
CDC42BPG-201ENST00000342711 CSPP1Q1MSJ5 1256 aa20.6■□□□□ 0.89
CDC42BPG-201ENST00000342711 GORABQ5T7V8 394 aa20.6■□□□□ 0.89
CDC42BPG-201ENST00000342711 SLC4A10Q6U841 1118 aa20.6■□□□□ 0.89
CDC42BPG-201ENST00000342711 CHMP3Q9Y3E7 222 aa20.59■□□□□ 0.89
CDC42BPG-201ENST00000342711 SPAG9O60271 1321 aaKnown RBP20.59■□□□□ 0.89
CDC42BPG-201ENST00000342711 FOXD4L5Q5VV16 416 aaPredicted RBP20.58■□□□□ 0.89
CDC42BPG-201ENST00000342711 FOXD4L4Q8WXT5 416 aaPredicted RBP20.58■□□□□ 0.89
CDC42BPG-201ENST00000342711 CSB-PGBD3P0DP91 1061 aa20.58■□□□□ 0.89
CDC42BPG-201ENST00000342711 EIF3AQ14152 1382 aaKnown RBP20.57■□□□□ 0.88
CDC42BPG-201ENST00000342711 PDE3BQ13370 1112 aa20.56■□□□□ 0.88
CDC42BPG-201ENST00000342711 NLRP13Q86W25 1043 aa20.55■□□□□ 0.88
CDC42BPG-201ENST00000342711 GOLGA6L1Q8N7Z2 621 aa20.55■□□□□ 0.88
CDC42BPG-201ENST00000342711 L3MBTL2Q969R5 705 aa20.55■□□□□ 0.88
CDC42BPG-201ENST00000342711 WIZO95785 1651 aa20.54■□□□□ 0.88
CDC42BPG-201ENST00000342711 ST18O60284 1047 aa20.54■□□□□ 0.88
CDC42BPG-201ENST00000342711 CREBRFQ8IUR6 639 aa20.54■□□□□ 0.88
CDC42BPG-201ENST00000342711 CCDC34Q96HJ3 373 aa20.53■□□□□ 0.88
CDC42BPG-201ENST00000342711 PHF14O94880 888 aa20.53■□□□□ 0.88
CDC42BPG-201ENST00000342711 SLC4A3P48751 1232 aa20.52■□□□□ 0.88
CDC42BPG-201ENST00000342711 DDX11L8A8MPP1 907 aa20.52■□□□□ 0.88
CDC42BPG-201ENST00000342711 TAF7LQ5H9L4 462 aa20.52■□□□□ 0.88
CDC42BPG-201ENST00000342711 ANKRD30AQ9BXX3 1397 aa20.52■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms