RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 MYO5CQ9NQX4 1742 aa25.61■■□□□ 1.69
FRMD4A-202ENST00000342409 HFM1A2PYH4 1435 aa25.61■■□□□ 1.69
FRMD4A-202ENST00000342409 CFDP1Q9UEE9 299 aaPredicted RBP25.6■■□□□ 1.69
FRMD4A-202ENST00000342409 DAPK1P53355 1430 aa25.6■■□□□ 1.69
FRMD4A-202ENST00000342409 ABCC5O15440 1437 aa25.59■■□□□ 1.69
FRMD4A-202ENST00000342409 NAIPQ13075 1403 aa25.58■■□□□ 1.69
FRMD4A-202ENST00000342409 SAMD9LQ8IVG5 1584 aa25.55■■□□□ 1.68
FRMD4A-202ENST00000342409 AKNAQ7Z591 1439 aa25.55■■□□□ 1.68
FRMD4A-202ENST00000342409 ADGBQ8N7X0 1667 aa25.54■■□□□ 1.68
FRMD4A-202ENST00000342409 RIMBP3CA6NJZ7 1639 aa25.53■■□□□ 1.68
FRMD4A-202ENST00000342409 RIMBP3BA6NNM3 1639 aa25.53■■□□□ 1.68
FRMD4A-202ENST00000342409 RIMBP3Q9UFD9 1639 aa25.53■■□□□ 1.68
FRMD4A-202ENST00000342409 KDM6BO15054 1643 aa25.52■■□□□ 1.68
FRMD4A-202ENST00000342409 WDR7Q9Y4E6 1490 aa25.51■■□□□ 1.67
FRMD4A-202ENST00000342409 CHIC2Q9UKJ5 165 aa25.5■■□□□ 1.67
FRMD4A-202ENST00000342409 ZNF777Q9ULD5 760 aaPredicted RBP25.49■■□□□ 1.67
FRMD4A-202ENST00000342409 KCNH8Q96L42 1107 aa25.49■■□□□ 1.67
FRMD4A-202ENST00000342409 ARHGEF5Q12774 1597 aa25.48■■□□□ 1.67
FRMD4A-202ENST00000342409 MAPKBP1O60336 1514 aa25.47■■□□□ 1.67
FRMD4A-202ENST00000342409 ROCK1Q13464 1354 aa25.47■■□□□ 1.67
FRMD4A-202ENST00000342409 RRP7BPQ9NSQ0 103 aa25.46■■□□□ 1.67
FRMD4A-202ENST00000342409 ASXL2Q76L83 1435 aa25.45■■□□□ 1.67
FRMD4A-202ENST00000342409 ARHGAP5Q13017 1502 aa25.45■■□□□ 1.67
FRMD4A-202ENST00000342409 MBD5Q9P267 1494 aa25.45■■□□□ 1.66
FRMD4A-202ENST00000342409 ABCA9Q8IUA7 1624 aa25.45■■□□□ 1.66
FRMD4A-202ENST00000342409 CLSPNQ9HAW4 1339 aa25.44■■□□□ 1.66
FRMD4A-202ENST00000342409 ADGRL2O95490 1459 aa25.42■■□□□ 1.66
FRMD4A-202ENST00000342409 PLCH2O75038 1416 aa25.42■■□□□ 1.66
FRMD4A-202ENST00000342409 SHANK2Q9UPX8 1470 aa25.4■■□□□ 1.66
FRMD4A-202ENST00000342409 ARAP3Q8WWN8 1544 aa25.39■■□□□ 1.65
FRMD4A-202ENST00000342409 SYCP2Q9BX26 1530 aa25.39■■□□□ 1.65
FRMD4A-202ENST00000342409 NCOA1Q15788 1441 aa25.37■■□□□ 1.65
FRMD4A-202ENST00000342409 HNRNPMP52272 730 aaKnown RBP eCLIP25.35■■□□□ 1.65
FRMD4A-202ENST00000342409 ARHGEF12Q9NZN5 1544 aa25.35■■□□□ 1.65
FRMD4A-202ENST00000342409 CCDC141Q6ZP82 1450 aa25.34■■□□□ 1.65
FRMD4A-202ENST00000342409 ABCC1P33527 1531 aa25.33■■□□□ 1.65
FRMD4A-202ENST00000342409 C9orf84Q5VXU9 1444 aa25.33■■□□□ 1.65
FRMD4A-202ENST00000342409 MAST1Q9Y2H9 1570 aa25.32■■□□□ 1.64
FRMD4A-202ENST00000342409 KIAA1107Q9UPP5 1409 aa25.32■■□□□ 1.64
FRMD4A-202ENST00000342409 PLEKHH2Q8IVE3 1493 aa25.31■■□□□ 1.64
FRMD4A-202ENST00000342409 NPM1P06748 294 aaKnown RBP eCLIP25.3■■□□□ 1.64
FRMD4A-202ENST00000342409 CYB5RLQ6IPT4 315 aa25.28■■□□□ 1.64
FRMD4A-202ENST00000342409 DENND4BO75064 1496 aaPredicted RBP25.28■■□□□ 1.64
FRMD4A-202ENST00000342409 ANKRD30AQ9BXX3 1397 aa25.27■■□□□ 1.64
FRMD4A-202ENST00000342409 EFCAB2Q5VUJ9 269 aa25.26■■□□□ 1.63
FRMD4A-202ENST00000342409 RSPH4AQ5TD94 716 aa25.23■■□□□ 1.63
FRMD4A-202ENST00000342409 FANCAO15360 1455 aa25.21■■□□□ 1.63
FRMD4A-202ENST00000342409 PLXNC1O60486 1568 aa25.21■■□□□ 1.63
FRMD4A-202ENST00000342409 TSPY4P0CV99 314 aa25.2■■□□□ 1.63
FRMD4A-202ENST00000342409 TSPY10P0CW01 314 aa25.2■■□□□ 1.63
FRMD4A-202ENST00000342409 TRAPPC8Q9Y2L5 1435 aa25.2■■□□□ 1.62
FRMD4A-202ENST00000342409 ANKRD50Q9ULJ7 1429 aa25.17■■□□□ 1.62
FRMD4A-202ENST00000342409 KIF15Q9NS87 1388 aa25.16■■□□□ 1.62
FRMD4A-202ENST00000342409 TRIM52Q96A61 297 aa25.14■■□□□ 1.61
FRMD4A-202ENST00000342409 SIN3AQ96ST3 1273 aa25.14■■□□□ 1.61
FRMD4A-202ENST00000342409 PZPP20742 1482 aa25.13■■□□□ 1.61
FRMD4A-202ENST00000342409 MAP3K4Q9Y6R4 1608 aa25.13■■□□□ 1.61
FRMD4A-202ENST00000342409 CD109Q6YHK3 1445 aa25.12■■□□□ 1.61
FRMD4A-202ENST00000342409 CFAP74Q9C0B2 1584 aa25.12■■□□□ 1.61
FRMD4A-202ENST00000342409 ACIN1Q9UKV3 1341 aaKnown RBP25.11■■□□□ 1.61
FRMD4A-202ENST00000342409 GLI2P10070 1586 aa25.11■■□□□ 1.61
FRMD4A-202ENST00000342409 ADGRL1O94910 1474 aa25.1■■□□□ 1.61
FRMD4A-202ENST00000342409 ZFYVE16Q7Z3T8 1539 aa25.1■■□□□ 1.61
FRMD4A-202ENST00000342409 MPHOSPH9Q99550 1183 aa25.1■■□□□ 1.61
FRMD4A-202ENST00000342409 INO80Q9ULG1 1556 aaPredicted RBP25.09■■□□□ 1.61
FRMD4A-202ENST00000342409 KDM5DQ9BY66 1539 aa25.08■■□□□ 1.61
FRMD4A-202ENST00000342409 DIP2BQ9P265 1576 aa25.06■■□□□ 1.6
FRMD4A-202ENST00000342409 SCAPERQ9BY12 1400 aa25.06■■□□□ 1.6
FRMD4A-202ENST00000342409 UNC13BO14795 1591 aa25.05■■□□□ 1.6
FRMD4A-202ENST00000342409 DUOX2Q9NRD8 1548 aa25.05■■□□□ 1.6
FRMD4A-202ENST00000342409 AFAP1Q8N556 730 aa25.04■■□□□ 1.6
FRMD4A-202ENST00000342409 RTEL1-TNFRSF6BF6WH68 1400 aa25.04■■□□□ 1.6
FRMD4A-202ENST00000342409 NEUROD1Q13562 356 aa25.03■■□□□ 1.6
FRMD4A-202ENST00000342409 ATP7AQ04656 1500 aa25.02■■□□□ 1.6
FRMD4A-202ENST00000342409 KIDINS220Q9ULH0 1771 aa25.02■■□□□ 1.6
FRMD4A-202ENST00000342409 SPAG9O60271 1321 aaKnown RBP24.99■■□□□ 1.59
FRMD4A-202ENST00000342409 PPRC1Q5VV67 1664 aaKnown RBP24.99■■□□□ 1.59
FRMD4A-202ENST00000342409 FOXD1Q16676 465 aa24.98■■□□□ 1.59
FRMD4A-202ENST00000342409 NEO1Q92859 1461 aa24.98■■□□□ 1.59
FRMD4A-202ENST00000342409 KIF13AQ9H1H9 1805 aa24.98■■□□□ 1.59
FRMD4A-202ENST00000342409 SLC4A1APQ9BWU0 796 aaKnown RBP24.98■■□□□ 1.59
FRMD4A-202ENST00000342409 ANKRD30BQ9BXX2 1392 aa24.98■■□□□ 1.59
FRMD4A-202ENST00000342409 KDM5CP41229 1560 aa24.97■■□□□ 1.59
FRMD4A-202ENST00000342409 ERBINQ96RT1 1412 aa24.97■■□□□ 1.59
FRMD4A-202ENST00000342409 TSPOAP1O95153 1857 aa24.95■■□□□ 1.59
FRMD4A-202ENST00000342409 NUP155O75694 1391 aa24.95■■□□□ 1.58
FRMD4A-202ENST00000342409 POGZQ7Z3K3 1410 aa24.95■■□□□ 1.58
FRMD4A-202ENST00000342409 MAGI2Q86UL8 1455 aa24.94■■□□□ 1.58
FRMD4A-202ENST00000342409 IQGAP3Q86VI3 1631 aa24.94■■□□□ 1.58
FRMD4A-202ENST00000342409 TIMELESSQ9UNS1 1208 aa24.94■■□□□ 1.58
FRMD4A-202ENST00000342409 ZNF518AQ6AHZ1 1483 aa24.94■■□□□ 1.58
FRMD4A-202ENST00000342409 RICTORQ6R327 1708 aa24.93■■□□□ 1.58
FRMD4A-202ENST00000342409 FAM135AQ9P2D6 1515 aa24.93■■□□□ 1.58
FRMD4A-202ENST00000342409 DEPDC5O75140 1603 aa24.91■■□□□ 1.58
FRMD4A-202ENST00000342409 HECW2Q9P2P5 1572 aa24.89■■□□□ 1.57
FRMD4A-202ENST00000342409 FAM69CQ0P6D2 419 aa24.87■■□□□ 1.57
FRMD4A-202ENST00000342409 PKD2Q13563 968 aa24.87■■□□□ 1.57
FRMD4A-202ENST00000342409 EIF2AK4Q9P2K8 1649 aaKnown RBP24.87■■□□□ 1.57
FRMD4A-202ENST00000342409 RPRD2Q5VT52 1461 aaKnown RBP24.87■■□□□ 1.57
FRMD4A-202ENST00000342409 MLH3Q9UHC1 1453 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms